GBrowse Details

Vigan.05G049500.01

Basic Information:
Name: Vigan.05G049500.01
Multiple alignment
Variant Information
Position: Chr05:3518252..3519735 (+ strand)
Length: 1484
Functional Information:
Description: Similar to nudix hydrolase 15, mitochondrial-like. [XP_004505126.1, Cicer arietinum]
GO: Molecular Function: hydrolase activity (GO:0016787)
InterPro: NUDIX hydrolase domain (IPR000086)
NUDIX hydrolase domain-like (IPR015797)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.06,0.00,5.62,1.40,0.10,7.88,0.03,2.41
Structure :
Position: Chr05:3518252..3518315 (+ strand)
Length: 64
Type: five_prime_UTR
Position: Chr05:3518316..3518601 (+ strand)
Length: 286
Type: CDS
Position: Chr05:3518847..3518989 (+ strand)
Length: 143
Type: CDS
Position: Chr05:3519177..3519296 (+ strand)
Length: 120
Type: CDS
Position: Chr05:3519369..3519572 (+ strand)
Length: 204
Type: CDS
Position: Chr05:3519573..3519735 (+ strand)
Length: 163
Type: three_prime_UTR

>Vigan.05G049500.01 class=Sequence position=Chr05:3518252..3519735 (+ strand)
GTATGGCCTT ATATTACCAT TCGTGACTTG TATTGTGAGA AGATAGTTTT TCTCTCCCAA GTTCATGGAT TGTTCAAACT
CTAATGGAGG ATCAAAGAGG CTTCTGGACT TGGCGCAAAG GCTCCGCCTT TACAAGCCCC CAATATTCCC TGAAGATATT
TTGGATGACA TCATGGAAGA CAAGGTTGTC TCAGAAGTGA GTTACTCAGA ATCAACCACC TCAATGGCTC AAAACACAGA
AGAATTCAGA TACAAGAGAG CTGCTGTTTT GATCTGCATC TATGAAGGAG ATGCCGGGGA TCTCAGAGTG GTACTCACCA
AGCGCTCTTC CATGCTCTCC ACTTACTCGG GTCAGTTCAA TTTCATACAA GTGCTTTGTC CTTTTTTTTA AAAAAAAAAA
TGATAGATTA CTATCATATA ATTGTAACTA CATTTGCAAT GTGGTTGTTC TGCTGTGATA ACAAAGATCT TGGTGTCTTT
TAAATTTTTG ATGACGTGTT TGAAATCTTT TTCCCCCTCC CTTCATATTT AGGCTCTGTG AATGAATCAG TAGGGAATGT
AATGAGGGTT GTGTGTATTG CATGTTGTTT TGCAGGTGAA GTGGCCTTGC CTGGTGGGAA AGCGGAGGAG GGTGACAAGG
ATGATAAGGA CACGGCAAAA AGAGAGGCAA TGGAGGAAAT TGGGTTGGAC CCTGAACTTG TCGATGTCGT TACTGTTCTT
GAACCATTTT TCTCTAAGGT ATAGACTCTT TTTCACACAT CTACTTGTTG GAGTAACTGA TATTATGCAG AATTCTGAAG
CATCATATCA CATGATCTTG AGTGGTTATA TATTTCTTGA TTCACAAATG AACATTGATT AATCTAAAAC TATAGATAAA
GTTTCCTCTA AGTGAAAGTT AACCCTTTTT TTAATCCTTT TGTAGTACCT GATGAGAGTG GTTCCTGTGA TTGGCATTCT
TCATGACAAA AAGGCATTCA AAGCTGTTCT GAATCCTGCT GAAGTAGAAG CTGTGTTTGA TGCACCTTTA GAAATGTTCC
TCAAGGTTGA GTCTTAGTTT TATTTGTGCG TGATGTATGT TTTACTTTGT ATTGATGTAG AAGTTGATGT GAATCAGGAT
GAAAATAGGA GTGAGGAGAA GATGGAATGG ATGGGAGAGA ATTATCTGAT ACATTTGTTT GACTACGAAA TGGAGCATAA
AAAATATCTG ATATGGGGTT TAACGGCTGG GATCTTAATA AGGGCAGCAT CAGTTGTGTA CCAACGACCA CCAGCTTTCA
TGGAGCACAA TCCTAAATTC AAGCTTCATC AAGTCATTTA ACTCTGTAAC GCACTCAATT TACCTCTTAA CAATTGTTCA
CCCATCACTA CTACACATTT CCAGATTAAC TCTTTAAATG TATCCCAACA CTTGCAGAAT GCCATCAATA AGTTACAATT
GTTTACTTCA AAGAATGCAT CAATAATATT TACAAACATT TACT

>Vigan.05G049500.01
GTATGGCCTT ATATTACCAT TCGTGACTTG TATTGTGAGA AGATAGTTTT TCTCTCCCAA GTTCATGGAT TGTTCAAACT
CTAATGGAGG ATCAAAGAGG CTTCTGGACT TGGCGCAAAG GCTCCGCCTT TACAAGCCCC CAATATTCCC TGAAGATATT
TTGGATGACA TCATGGAAGA CAAGGTTGTC TCAGAAGTGA GTTACTCAGA ATCAACCACC TCAATGGCTC AAAACACAGA
AGAATTCAGA TACAAGAGAG CTGCTGTTTT GATCTGCATC TATGAAGGAG ATGCCGGGGA TCTCAGAGTG GTACTCACCA
AGCGCTCTTC CATGCTCTCC ACTTACTCGG GTGAAGTGGC CTTGCCTGGT GGGAAAGCGG AGGAGGGTGA CAAGGATGAT
AAGGACACGG CAAAAAGAGA GGCAATGGAG GAAATTGGGT TGGACCCTGA ACTTGTCGAT GTCGTTACTG TTCTTGAACC
ATTTTTCTCT AAGTACCTGA TGAGAGTGGT TCCTGTGATT GGCATTCTTC ATGACAAAAA GGCATTCAAA GCTGTTCTGA
ATCCTGCTGA AGTAGAAGCT GTGTTTGATG CACCTTTAGA AATGTTCCTC AAGGATGAAA ATAGGAGTGA GGAGAAGATG
GAATGGATGG GAGAGAATTA TCTGATACAT TTGTTTGACT ACGAAATGGA GCATAAAAAA TATCTGATAT GGGGTTTAAC
GGCTGGGATC TTAATAAGGG CAGCATCAGT TGTGTACCAA CGACCACCAG CTTTCATGGA GCACAATCCT AAATTCAAGC
TTCATCAAGT CATTTAACTC TGTAACGCAC TCAATTTACC TCTTAACAAT TGTTCACCCA TCACTACTAC ACATTTCCAG
ATTAACTCTT TAAATGTATC CCAACACTTG CAGAATGCCA TCAATAAGTT ACAATTGTTT ACTTCAAAGA ATGCATCAAT
AATATTTACA AACATTTACT 

>Vigan.05G049500.01
ATGGATTGTT CAAACTCTAA TGGAGGATCA AAGAGGCTTC TGGACTTGGC GCAAAGGCTC CGCCTTTACA AGCCCCCAAT
ATTCCCTGAA GATATTTTGG ATGACATCAT GGAAGACAAG GTTGTCTCAG AAGTGAGTTA CTCAGAATCA ACCACCTCAA
TGGCTCAAAA CACAGAAGAA TTCAGATACA AGAGAGCTGC TGTTTTGATC TGCATCTATG AAGGAGATGC CGGGGATCTC
AGAGTGGTAC TCACCAAGCG CTCTTCCATG CTCTCCACTT ACTCGGGTGA AGTGGCCTTG CCTGGTGGGA AAGCGGAGGA
GGGTGACAAG GATGATAAGG ACACGGCAAA AAGAGAGGCA ATGGAGGAAA TTGGGTTGGA CCCTGAACTT GTCGATGTCG
TTACTGTTCT TGAACCATTT TTCTCTAAGT ACCTGATGAG AGTGGTTCCT GTGATTGGCA TTCTTCATGA CAAAAAGGCA
TTCAAAGCTG TTCTGAATCC TGCTGAAGTA GAAGCTGTGT TTGATGCACC TTTAGAAATG TTCCTCAAGG ATGAAAATAG
GAGTGAGGAG AAGATGGAAT GGATGGGAGA GAATTATCTG ATACATTTGT TTGACTACGA AATGGAGCAT AAAAAATATC
TGATATGGGG TTTAACGGCT GGGATCTTAA TAAGGGCAGC ATCAGTTGTG TACCAACGAC CACCAGCTTT CATGGAGCAC
AATCCTAAAT TCAAGCTTCA TCAAGTCATT TAA

>Vigan.05G049500.01
MDCSNSNGGS KRLLDLAQRL RLYKPPIFPE DILDDIMEDK VVSEVSYSES TTSMAQNTEE FRYKRAAVLI CIYEGDAGDL
RVVLTKRSSM LSTYSGEVAL PGGKAEEGDK DDKDTAKREA MEEIGLDPEL VDVVTVLEPF FSKYLMRVVP VIGILHDKKA
FKAVLNPAEV EAVFDAPLEM FLKDENRSEE KMEWMGENYL IHLFDYEMEH KKYLIWGLTA GILIRAASVV YQRPPAFMEH
NPKFKLHQVI *