GBrowse Details

Vigan.05G047500.01

Basic Information:
Name: Vigan.05G047500.01
Multiple alignment
Variant Information
Position: Chr05:3366644..3370238 (+ strand)
Length: 3595
Functional Information:
Description: Similar to Uncharacterized protein. [I1L9A4, Glycine max]
InterPro: Casein kinase substrate, phosphoprotein PP28 (IPR019380)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:251.47,119.63,97.43,145.07,121.17,56.24,87.25,82.31
Arabidopsis thaliana homolog: AT5G46020.1
Automatic updates:
Name: NM_001253325 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 28 kDa heat- and acid-stable phosphoprotein-like (LOC100782451), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:3366644..3366844 (+ strand)
Length: 201
Type: five_prime_UTR
Position: Chr05:3366845..3366911 (+ strand)
Length: 67
Type: CDS
Position: Chr05:3368074..3368111 (+ strand)
Length: 38
Type: CDS
Position: Chr05:3368309..3368389 (+ strand)
Length: 81
Type: CDS
Position: Chr05:3368520..3368603 (+ strand)
Length: 84
Type: CDS
Position: Chr05:3368689..3368723 (+ strand)
Length: 35
Type: CDS
Position: Chr05:3369526..3369611 (+ strand)
Length: 86
Type: CDS
Position: Chr05:3369868..3369933 (+ strand)
Length: 66
Type: CDS
Position: Chr05:3370023..3370057 (+ strand)
Length: 35
Type: CDS
Position: Chr05:3370058..3370238 (+ strand)
Length: 181
Type: three_prime_UTR

>Vigan.05G047500.01 class=Sequence position=Chr05:3366644..3370238 (+ strand)
GTTTAAATTC GTGTTTTTAA TATATATAAT ATCTTACATA ATTTATGTGG AGTTTAACTA GGGTTTTTGG AATTTGGAAT
AAAGGGGAAG AGAGTGCATC TTCCTTTTGT TGTTGTCAAA CTTTAATCTC ATAATATAGC AGAAGGAAGA AGAATTTGAT
TCGAAAATTG TAGCGTAGCG TGGGTGCAAT TGAACGATAA GATGGGAAGA GGAAAATACA AAAGCAAGCC CACCGGTCGC
CGCCAGTTCT CCACCCCGGA AGATCTCCGT GAGTCCCTTT TCCCTTTTCC TGCAAAAAGA TTACGCCTTT GGCCCTTAAA
GTGGAATTTT TATAACCTTG ATGAAATAGT TATTTTTTGT TGTGAAATAT GCTTGTGAAC TATTAGGGGT TATTTTCTTG
TTGTTTTTAT GTAGAGCGGG ATGTGGGTGG TGCATGAATG TTTTGATGTG GAAATGGAAT TTGTTGGGAT TGTTAGATCT
GGAGAGACTC CCCGGTTGGG TACTCTGGAT ATCTGTTTTT GTTTGAAATG AATTTCTATT ACTGTTCATT TGTTTGGATT
AATAACTGTT GAGTACCGTG CTGCTTTGTT TGATTTTCCC CATAAACTTT GAAGTGACTA CAGCTGTAAA TAAACGCGAG
TCAGGGCCTT TGATGATCAG GGAAAATTGT ATGTCTATAT GATGGAGAGG GAACGGTAAC CACTGTTTCA TGAATGCTAA
TGGAGAAAAT AAGTACTAAT GACCGTTTTA GTTTGCTGAG ATTGTCATTT TTGGTGTGTT TCAATGAGTT TATGTTTGGG
CCACTCCAAA TGAGGAAATT GTCACTCTCC TTATTGTGGA CTATAACTTT TAGATATCTT TGTGGAGTTG TCTTGCGATT
TCGTTTTCTT TTTAGATTTT GTTGAATTTG CATTTATGAA GTGGATATTG TGAAGAAAAG GTTTGGATCG TAGATGTGGA
ACTGAGACAT CGGGCAGATA AAGGATTTTA TCTTAGAAAG CTCTAGAATT TTGCACTGTT TGTAGGTTTG CATAATACTT
GCGGTTGAAG AAATTGATAT TTAGTTGAAC CCTGTGATTG CTTGTAAAAT AATATCTCAG TTCAATACCA TGCGCTTTTT
GTTTCTAGTA TCTTTTTTGT ATGGGGTAGT CACATATTAT CGCATGCTGG GAAATTAAAT GCTTTATTGT TGGCATTTAC
TGTCATTGTA TTTATGCTCC AGTATGCTAA TATTTTGTGG AGGCATCACT AGTTTTTAAA TTCTATTCCA ATTCCTTTAT
TTTGAAACTT TGCTGAAAAT ATTCTTGTTG ATGCCACCGC TCTTTTGGCC CCCTACCCCT CATAAAAAAA GAAACAGAAA
AATGATATTT CGTAATGATA GACTAAAAAA GCACTTTCAG AAACTTAAAT TTTGTTTTTG ACTACTGCAG TTGCTGGAAC
CTCTAACCGG CCTCGAACTT TTAAACAGGT TTTCTTCTGC ATCCATTCCT CTTCATTTTG CACCTCTCTT TCATAGCACA
GACACATGTG ATCACTAGCA CACTAATGTT TTTCTTTCCG TAGACCATCT ATGGCAACAA TTAATTTTTA TATATACATG
ATATGAATTA ATTTGTTCTC CATGTTCTTT ATAACTTTTT TTTCATAATC TTTACAACTT ATTAGAAAGA AGCTGAACAC
GTAGAGGAAG AATCTGAGGA AGCATCTGGG GATGAATCTG GAGAAGAATC TGAAGAAGAA TCTTCGGTTA GTATTTTGCA
GCAATTACTA ATATAGATGG ATTGAATTTT TAATTTTTTT AAGCGAGGAC TTGTTTCTTT ATATGATCTG CTGCCATCCT
AACTATTTTA ACTTCATCGA TATGTAATAT ATGCAGAAGA AAAAAGGAAC TCAAGGGATT ATTGAGATTG AAAATCCTAA
CTTGGTAAAG CCAAAGAGTG TGAAGGCCAG AGATGTTGAT GTGAGTTCAA TTTTCTGTTT TCGGTCTTCC CATGTAGACA
TTTTTCTGGA AGTTGGAAGA ATAATGCTAT TTTCTTGTGT TACAGGTTGG AAAAACAACA GAACTTTCAA GGCGTGAAAG
GTTAGCTACT TTTGCCTTTT GTTTATACCA TTTGAAAATT AACCGCTAAG TCAAAAAACG TTAGAATTAA GTTGAAAAGG
GATAGGGTTT TGACTACTGG TCATTAACTC AGAATGTAAG CTAAACTTAT TATGACATAA AGCCACAAGA CGAACACTCC
AATATGGCAA CAAAAACATC CCAAGCCTCC ATCATTGATC TTTAACAGGG CCCCAACAGA TAACCTCCCT AAGCCACCAC
CCCAAGTGAA ATAAGAGATA ATAATGAGCA TAGTATTTCA GGGATATATA GCTGTTAACA AACAGAATAG TGATGAGCTT
GAACTGAAAG CCCAATTCAC TGAGAGCAGA GTAAATGCTT CCCTTGAAGT TGAAACAAGA GAAAAAACAG AGATATGGAT
TCAAAATGAA GTAAAAATAT GGGAGAAAAG CCATTACCAT GATGTGGAGT AGAGTAGATT TGGGGAACTC CTAACTCACT
TTCTCACTTC CACATTGTAC AACCTGACCT GCAGGGCAGT TTACAGAATA TCAGGAATAT CTCGATTTCA TAATCTTCCC
TAGTGATCTT GCTACGAATC CACAATTCCA CCACCCTGTA TGTAATGGAA CACAGAAGGG AGACAAAACT TGTAGTATTG
TATAATTCGT AGTATCATCA ATGAGTGTAT TGCTTATTAT TAAACAGGGT GCAGAACATT ATTACGTCTA GTTGTTTCAA
TTCCTATCTT TGTGGGAATA TTGAAAGTGA AACTTCTGAA ACATTTTTTC TTAATATATT TAAATTTCAC ATCTGTTTTC
AGAGAGGAGC TGGAGAAACA GAGAGCCCAT GAGCGCTACA TGAGGCTGCA AGAGCAAGGG AAAACAGAAC AAGCAAAGAA
AGATTTAGGT ACCAGTAGCA TTTGAAACAG TCAACGATTG TTTCTGAAAG ATTCGTTCGT CCTTTTCTGT TTAAGTTCTT
GTCTTTGATT GTTGGTATTA TCATTAATTT TATTATGACT TATGTAAACT ATTGATTGAT ATGGTACTTT GTGAGCTGTA
TGAGTTCTGT AAAATAAAAT ATGCTTTGCA GATTGAAGTG GTTGTTTTGT GAGGGCTATT GTATTGTTTC CCAATGATTT
ATGGTTAGTT TGTCTGTCTT GTAGAACGTT TAGCTCTTAT ACGTCAGCAA AGGGCAGAGG CTGCTAAAAA GAGAGAAGAA
GAGAAAGCTG GTTAGCTCTT AAGTCTCTGA ATACTGTTTC TTCTGCTAAC TCTATTTCGA TATCCAAAAG CTTGAAACTA
ATAAGTAAAT TTGTTTCAGC TAAAGAGCAG AAGAAGGCTG AAGCGCGAAA GTAGAGAATG TAATGAGGCC AACTGTACTC
CAATTAGTAG GAGGAATATG TGCTCTTGCT ACACTTCAAC ATTATGTCCA TTTACCTTTT TATATTGTTA TTACCATACC
AATCTGGTAA CATGTAATGC AATTATTTTC CTATTCTGTG GTTTAAAATC GTGATTATAC ATATATAGAC TTCTT

>Vigan.05G047500.01
GTTTAAATTC GTGTTTTTAA TATATATAAT ATCTTACATA ATTTATGTGG AGTTTAACTA GGGTTTTTGG AATTTGGAAT
AAAGGGGAAG AGAGTGCATC TTCCTTTTGT TGTTGTCAAA CTTTAATCTC ATAATATAGC AGAAGGAAGA AGAATTTGAT
TCGAAAATTG TAGCGTAGCG TGGGTGCAAT TGAACGATAA GATGGGAAGA GGAAAATACA AAAGCAAGCC CACCGGTCGC
CGCCAGTTCT CCACCCCGGA AGATCTCCTT GCTGGAACCT CTAACCGGCC TCGAACTTTT AAACAGAAAG AAGCTGAACA
CGTAGAGGAA GAATCTGAGG AAGCATCTGG GGATGAATCT GGAGAAGAAT CTGAAGAAGA ATCTTCGAAG AAAAAAGGAA
CTCAAGGGAT TATTGAGATT GAAAATCCTA ACTTGGTAAA GCCAAAGAGT GTGAAGGCCA GAGATGTTGA TGTTGGAAAA
ACAACAGAAC TTTCAAGGCG TGAAAGAGAG GAGCTGGAGA AACAGAGAGC CCATGAGCGC TACATGAGGC TGCAAGAGCA
AGGGAAAACA GAACAAGCAA AGAAAGATTT AGAACGTTTA GCTCTTATAC GTCAGCAAAG GGCAGAGGCT GCTAAAAAGA
GAGAAGAAGA GAAAGCTGCT AAAGAGCAGA AGAAGGCTGA AGCGCGAAAG TAGAGAATGT AATGAGGCCA ACTGTACTCC
AATTAGTAGG AGGAATATGT GCTCTTGCTA CACTTCAACA TTATGTCCAT TTACCTTTTT ATATTGTTAT TACCATACCA
ATCTGGTAAC ATGTAATGCA ATTATTTTCC TATTCTGTGG TTTAAAATCG TGATTATACA TATATAGACT TCTT

>Vigan.05G047500.01
ATGGGAAGAG GAAAATACAA AAGCAAGCCC ACCGGTCGCC GCCAGTTCTC CACCCCGGAA GATCTCCTTG CTGGAACCTC
TAACCGGCCT CGAACTTTTA AACAGAAAGA AGCTGAACAC GTAGAGGAAG AATCTGAGGA AGCATCTGGG GATGAATCTG
GAGAAGAATC TGAAGAAGAA TCTTCGAAGA AAAAAGGAAC TCAAGGGATT ATTGAGATTG AAAATCCTAA CTTGGTAAAG
CCAAAGAGTG TGAAGGCCAG AGATGTTGAT GTTGGAAAAA CAACAGAACT TTCAAGGCGT GAAAGAGAGG AGCTGGAGAA
ACAGAGAGCC CATGAGCGCT ACATGAGGCT GCAAGAGCAA GGGAAAACAG AACAAGCAAA GAAAGATTTA GAACGTTTAG
CTCTTATACG TCAGCAAAGG GCAGAGGCTG CTAAAAAGAG AGAAGAAGAG AAAGCTGCTA AAGAGCAGAA GAAGGCTGAA
GCGCGAAAGT AG

>Vigan.05G047500.01
MGRGKYKSKP TGRRQFSTPE DLLAGTSNRP RTFKQKEAEH VEEESEEASG DESGEESEEE SSKKKGTQGI IEIENPNLVK
PKSVKARDVD VGKTTELSRR EREELEKQRA HERYMRLQEQ GKTEQAKKDL ERLALIRQQR AEAAKKREEE KAAKEQKKAE
ARK*