GBrowse Details

Vigan.05G034000.01

Basic Information:
Name: Vigan.05G034000.01
Multiple alignment
Variant Information
Position: Chr05:2211362..2212964 (- strand)
Length: 1603
Functional Information:
Description: Similar to Uncharacterized protein. [I1M2D6, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.65,0.80,0.57,0.09,0.00,0.12,0.11
Arabidopsis thaliana homolog: AT4G21440.1
Automatic updates:
Name: DQ822949 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB77 (MYB77) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:2211362..2211518 (- strand)
Length: 157
Type: three_prime_UTR
Position: Chr05:2211519..2212380 (- strand)
Length: 862
Type: CDS
Position: Chr05:2212485..2212614 (- strand)
Length: 130
Type: CDS
Position: Chr05:2212727..2212859 (- strand)
Length: 133
Type: CDS
Position: Chr05:2212860..2212964 (- strand)
Length: 105
Type: five_prime_UTR

>Vigan.05G034000.01 class=Sequence position=Chr05:2211362..2212964 (- strand)
ATCATAACTC CGTTTTTTCC TCCCTCTCTC TTTCCCTATT CTCTCACGTC TCATATATTT CCTCCTCTGT CTCTCGTCGT
CACCTTCAAC CATTCACCTT CTAAAATGGG GAGATCACCT TGTTGCGAAA AGAATGGCCT CAAGAAAGGA CCATGGACCA
CTGAGGAGGA TCAGAAACTC CTTGATTACA TTCAGAAACA TGGATATGGC AACTGGAGGA CACTCCCAAA GAATGCTGGT
ATCTCACCGA ATTAAACAAA ATAAAAAAAC TGCATTTAAA TAAATGTTTT TTTTTTTAAA TCTAATTATG TGAGTTTCAA
CTGACGAGTT TGGTGTTATT TATTGAATAG GGTTGCAGAG ATGTGGAAAG AGTTGCCGTC TTCGTTGGAC AAACTATCTC
CGACCAGACA TAAAGCGAGG TCGGTTTTCG TTTGAGGAGG AAGAGACCAT AATTCAGCTA CATAGCATTC TTGGCAACAA
GTCAGTTCTT GTCTCTTCTC TGAGTTTTTA CTCAAAATTA TTTAATAAGA GACAAACAAC GCTTACTGTT CCTTAAATAT
TTTATAACGT TTCTTATTGT GTAGGTGGTC TGCAATTGCT TCTCGCTTAC CCGGAAGAAC AGACAATGAA ATCAAGAACT
ATTGGAACAC ACACATTAGA AAAAGGCTTC TGAGGATGGG AATCGACCCT GTCACACACA GTCCTCGACT TGATCTATTG
GACATCTCTT CCATTCTAAA CGCATCTTTC TATGGTTCAT CACAAATGCT CCTTGGCATG CAGCCTTCTA TGGTGAACCC
CGAGCTTTTA AGGTTGGCTT CTTCACTCTT CTCCTCCTCA CAGCAACACA AACACCTTGA AATCTGTGCT CCAAAGGGTC
AACAGAACCA GCTTTGCGAT CCACAGGTTC AGAATCATGT TCCACACTTG GCACAATTTC AAGATCCAGT TCAAGAGGTG
CCTGCATGCA GCACCCCCGT GTTCGGCACC CCTCGTGTTT CATTGCCTCT CTCTCAACCA CAGTTGGTTG AGCCCCATAA
TGTGGACCCG TATCCATCAT CAAGTTTCAC AGACTTCACT TACCAACAAC ATTCCCATGA TGATCAGATA ATAAGTGATT
GGCACAAAGA TGGGGTTGCT TTAAGCACTT TAACAGATGA CTATGTCCCT CAGTTATCAG GCTATAATTA TTATAGTTCT
GATGCTCAAG ATCTCGTGTA TCCTCCCTTG TCCGAACCTT CAACTTTCCA TTCCAATAAC AGCAATCAGA ACTTCAGCTT
CGCTTCAGTT CTATCCACGC CTTCGTCAAG CCCCACACCC TTGAACTCAA ACTCCACGAT AATCAACGGG AGCAACACAG
AAGACGAGAG AGACCAGAGC TATGACAGTA GCAGCATGTT GAAATTTGAA ATCCCAGATA TTTTAGATGT GAATGAGTTC
ATGTAATGTG ATCAGATACA CAGATCATCA ACGATTAATT AAATCAGCCA AAAAGTCGAT TGATTTTATC ACATGTCCCC
CAAATTGTTT TTCTGGGATA CCTTGATACG GATCCGTGGT GTTGATCCCT GTAACATTTT CCTAATTTTT ATTATTGATT
GAC

>Vigan.05G034000.01
ATCATAACTC CGTTTTTTCC TCCCTCTCTC TTTCCCTATT CTCTCACGTC TCATATATTT CCTCCTCTGT CTCTCGTCGT
CACCTTCAAC CATTCACCTT CTAAAATGGG GAGATCACCT TGTTGCGAAA AGAATGGCCT CAAGAAAGGA CCATGGACCA
CTGAGGAGGA TCAGAAACTC CTTGATTACA TTCAGAAACA TGGATATGGC AACTGGAGGA CACTCCCAAA GAATGCTGGG
TTGCAGAGAT GTGGAAAGAG TTGCCGTCTT CGTTGGACAA ACTATCTCCG ACCAGACATA AAGCGAGGTC GGTTTTCGTT
TGAGGAGGAA GAGACCATAA TTCAGCTACA TAGCATTCTT GGCAACAAGT GGTCTGCAAT TGCTTCTCGC TTACCCGGAA
GAACAGACAA TGAAATCAAG AACTATTGGA ACACACACAT TAGAAAAAGG CTTCTGAGGA TGGGAATCGA CCCTGTCACA
CACAGTCCTC GACTTGATCT ATTGGACATC TCTTCCATTC TAAACGCATC TTTCTATGGT TCATCACAAA TGCTCCTTGG
CATGCAGCCT TCTATGGTGA ACCCCGAGCT TTTAAGGTTG GCTTCTTCAC TCTTCTCCTC CTCACAGCAA CACAAACACC
TTGAAATCTG TGCTCCAAAG GGTCAACAGA ACCAGCTTTG CGATCCACAG GTTCAGAATC ATGTTCCACA CTTGGCACAA
TTTCAAGATC CAGTTCAAGA GGTGCCTGCA TGCAGCACCC CCGTGTTCGG CACCCCTCGT GTTTCATTGC CTCTCTCTCA
ACCACAGTTG GTTGAGCCCC ATAATGTGGA CCCGTATCCA TCATCAAGTT TCACAGACTT CACTTACCAA CAACATTCCC
ATGATGATCA GATAATAAGT GATTGGCACA AAGATGGGGT TGCTTTAAGC ACTTTAACAG ATGACTATGT CCCTCAGTTA
TCAGGCTATA ATTATTATAG TTCTGATGCT CAAGATCTCG TGTATCCTCC CTTGTCCGAA CCTTCAACTT TCCATTCCAA
TAACAGCAAT CAGAACTTCA GCTTCGCTTC AGTTCTATCC ACGCCTTCGT CAAGCCCCAC ACCCTTGAAC TCAAACTCCA
CGATAATCAA CGGGAGCAAC ACAGAAGACG AGAGAGACCA GAGCTATGAC AGTAGCAGCA TGTTGAAATT TGAAATCCCA
GATATTTTAG ATGTGAATGA GTTCATGTAA TGTGATCAGA TACACAGATC ATCAACGATT AATTAAATCA GCCAAAAAGT
CGATTGATTT TATCACATGT CCCCCAAATT GTTTTTCTGG GATACCTTGA TACGGATCCG TGGTGTTGAT CCCTGTAACA
TTTTCCTAAT TTTTATTATT GATTGAC

>Vigan.05G034000.01
ATGGGGAGAT CACCTTGTTG CGAAAAGAAT GGCCTCAAGA AAGGACCATG GACCACTGAG GAGGATCAGA AACTCCTTGA
TTACATTCAG AAACATGGAT ATGGCAACTG GAGGACACTC CCAAAGAATG CTGGGTTGCA GAGATGTGGA AAGAGTTGCC
GTCTTCGTTG GACAAACTAT CTCCGACCAG ACATAAAGCG AGGTCGGTTT TCGTTTGAGG AGGAAGAGAC CATAATTCAG
CTACATAGCA TTCTTGGCAA CAAGTGGTCT GCAATTGCTT CTCGCTTACC CGGAAGAACA GACAATGAAA TCAAGAACTA
TTGGAACACA CACATTAGAA AAAGGCTTCT GAGGATGGGA ATCGACCCTG TCACACACAG TCCTCGACTT GATCTATTGG
ACATCTCTTC CATTCTAAAC GCATCTTTCT ATGGTTCATC ACAAATGCTC CTTGGCATGC AGCCTTCTAT GGTGAACCCC
GAGCTTTTAA GGTTGGCTTC TTCACTCTTC TCCTCCTCAC AGCAACACAA ACACCTTGAA ATCTGTGCTC CAAAGGGTCA
ACAGAACCAG CTTTGCGATC CACAGGTTCA GAATCATGTT CCACACTTGG CACAATTTCA AGATCCAGTT CAAGAGGTGC
CTGCATGCAG CACCCCCGTG TTCGGCACCC CTCGTGTTTC ATTGCCTCTC TCTCAACCAC AGTTGGTTGA GCCCCATAAT
GTGGACCCGT ATCCATCATC AAGTTTCACA GACTTCACTT ACCAACAACA TTCCCATGAT GATCAGATAA TAAGTGATTG
GCACAAAGAT GGGGTTGCTT TAAGCACTTT AACAGATGAC TATGTCCCTC AGTTATCAGG CTATAATTAT TATAGTTCTG
ATGCTCAAGA TCTCGTGTAT CCTCCCTTGT CCGAACCTTC AACTTTCCAT TCCAATAACA GCAATCAGAA CTTCAGCTTC
GCTTCAGTTC TATCCACGCC TTCGTCAAGC CCCACACCCT TGAACTCAAA CTCCACGATA ATCAACGGGA GCAACACAGA
AGACGAGAGA GACCAGAGCT ATGACAGTAG CAGCATGTTG AAATTTGAAA TCCCAGATAT TTTAGATGTG AATGAGTTCA
TGTAA

>Vigan.05G034000.01
MGRSPCCEKN GLKKGPWTTE EDQKLLDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY LRPDIKRGRF SFEEEETIIQ
LHSILGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG IDPVTHSPRL DLLDISSILN ASFYGSSQML LGMQPSMVNP
ELLRLASSLF SSSQQHKHLE ICAPKGQQNQ LCDPQVQNHV PHLAQFQDPV QEVPACSTPV FGTPRVSLPL SQPQLVEPHN
VDPYPSSSFT DFTYQQHSHD DQIISDWHKD GVALSTLTDD YVPQLSGYNY YSSDAQDLVY PPLSEPSTFH SNNSNQNFSF
ASVLSTPSSS PTPLNSNSTI INGSNTEDER DQSYDSSSML KFEIPDILDV NEFM*