GBrowse Details

Vigan.04G367200.01

Basic Information:
Name: Vigan.04G367200.01
Multiple alignment
Variant Information
Position: Chr04:48655062..48660574 (+ strand)
Length: 5513
Functional Information:
Description: Similar to Dehydroascorbate reductase. [Q4JR86, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.18,5.56,14.76,62.40,14.35,17.39,6.44,14.79
Arabidopsis thaliana homolog: AT5G16710.1
Automatic updates:
Name: KM818411 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max DHAR class glutathione S-transferase (DHAR2) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KM818412 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max DHAR class glutathione S-transferase (DHAR3) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001250000 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max dehydroascorbate reductase (DHAR3), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:48655062..48655175 (+ strand)
Length: 114
Type: five_prime_UTR
Position: Chr04:48655176..48655383 (+ strand)
Length: 208
Type: CDS
Position: Chr04:48656223..48656313 (+ strand)
Length: 91
Type: CDS
Position: Chr04:48656458..48656601 (+ strand)
Length: 144
Type: CDS
Position: Chr04:48656770..48656887 (+ strand)
Length: 118
Type: CDS
Position: Chr04:48659441..48659581 (+ strand)
Length: 141
Type: CDS
Position: Chr04:48660147..48660233 (+ strand)
Length: 87
Type: CDS
Position: Chr04:48660234..48660574 (+ strand)
Length: 341
Type: three_prime_UTR

>Vigan.04G367200.01 class=Sequence position=Chr04:48655062..48660574 (+ strand)
TCAAGCATAA AACCATGATG TTGTGAAATG TTGGATAGTG CCACGTAAAC ACCACCGGAA CCAAAACCAC AACGAAACAT
CATCGTCAAC ATCGGGTTCG GAGTAGAAGC TGCAATGTCC ACTGCGAGAG TTCAAGTTTC GGCGTGTGCG CTTTCCGCTG
CCGTCAACAA CCTCCGTCTC CGGCCAACCG CCGTCGTTTC CTTCACCAAC CATTTCAGGA AGAAGTCTCT GAGGGTGGTG
TCAATGTCGT CCGTTCCCCC TTCCCAACCC TTCGAAATCG CCGTTAAAGC TTCCGTCACT ACACCCAATA GGCTCGGCGA
CTGTAATATA ATATTTTCAC CTTTTTATGC GTTTCTTTGT TTTCTTTTGG GTTAGTTTGA ACATCTCAAT GGTTTCTTCT
ATGGAAATTG AAATTACTTT CTCGTTAAGG GAATGGTGAT GTGCATGAAA GGATTACAGA AAGAGAAACG CGGCATGGTG
AAGATGAAGG GAAGGAAATT AGGATGTATC TGGACTCAAA TTATGTCCAC GTGCATTCTC AATTTTCACT CATTTGTCTC
TTTCTTTTCC ACTTACTATA GAGGCTGTTT TGTTGTGGAA ATGTTTTCTG TTGTCATGTT TCTACCGAAA TTCGCAAAAA
AAAATGTAAT CTCTAAGGCC TTGTTTGAAT AAATGTCTCA ATAAGTATAC GAAAAAGAAG AAAATAAAAA TGTGAACTTA
AGTTTTCCAT GAAGTTAGTT CAAGTATAGT TAAAATCATC TTTTTAGAAG CTAAACAAGA GAACTTTATG CCAAACTTAA
TTTTGATTAA TTTTATGGAA GAAAATTAAA TCATTTTATA TTCCTATTTT CTTCTCAAGT TGAACGAACA GCCTTTCCCA
TTCTCATAGT ATATGTATGT TATGTATGTG TAACTATAGC AGAAGAGATT CGGTGATTTA TCGTGTTTTT GAGATGTAGG
GAATGAGTTT TCGAGTATTT TTAGTCAATT CCATGATGTA GGCAATGCCA AAAGAGCCTT CATCCTGGAA TTAGAAAGAG
CAAATTTTAT GCGAATGTTT TGTATTTAAG AAAACAAATA ATGATCTTTT GTTGATATCT GAGCCTTAAA CTTGGCTGGA
CTAGCGTGGT TCCCATAATC AATTTTGAAT TGCCTTTTCA GGTCCCTTTT GCCAAAGGGT ATTACTAACA CTGGAAGAAA
AACATCTACC TTATGAACCC AAGTTGGTGG ATTTCACCAA CAGACCAGAA TGGTATCTTC TACCCCGCTT CTTGGGCTAA
ATTTTTAATT CGTTTACAGT TGCTATCTTC ATAAAACTGG ATCACCTACA TCCACCTGTC TGGTTCTCAT ACTACTTTAG
TTGTTTTCTT CTTTACATTT TGTTATGTTG GTTTAGGTTC CTTAAAGCCA ATCCTGATGG TAAAGTTCCT GTCATAAAGT
TTGATGAGAA GTGGGTTCCG GATTCAGATG TTATCACTCA AACATTGGAA GAGAAGTATC CTATCCCACC ATTGGTGACC
CCACCCGAAA AGGCCACAGT GTATGCATTT TGCTTATAGA TATATATGTT CTTAATTGTA CATTGCTTTG AATTTTTAGA
AAAATGATTT ATGAACTCAT ACATGCGTAA AAACAGTTTT CTTTCATACT CCATTTTTTG TGTACTCCAA TTGCCTAATG
CACGGATTTT TTATTTTTTT TTCTGTAGAG GTTCAAAGAT ATTTTCTACA TTTATTGGAT TTCTCAAGAG CAAGGATCCC
AATGATGGAA CAGAACAAGC ATTACTAAGT GAACTGAGCT CTTTCAATGA TTACATAAAG GAAAATGTAT GACATTGTTT
CTGCTTTTGT CTCTCTGCAA TTTGTTTGCA ATCTTGATAA GGTTTTTCAT TTGGTGCTGA AGTTTTACGC ATAGAAGAAT
TACCATGCAT TTTTTTGGAA GAAATCATTG TCCTCTCTTT GCATGCTTCC CCTTTGTGAA CCATTTTCTT CAGTTCGAAC
ATGTTGAGGT TTAAGCTAAA TGATGGTAAA GTGTGAAAAC TGAATTACTT GCAGTTAGTA TGCCTATATT TAGAAGGATA
TTTCATTAGA TTGTTTCCTT CTGTGTGTGC ATTTAATACA GAATTCAGAT ATGGTAAGGA TAAGCATTTG CTTGGGATAC
ATGGTAACCT ATGTATAACA ACTTCCCCAC TTTCTCGTCT GTCTTTACCT TTTCCTTGTA TATCTTGGAT TTAATATCTG
AACTTACATA ACAAATCCAT TCATCCAACT TTTATATACT TTATGTTTTT CATGTAACAT TCATCAGTGC ACTAATGTCT
TCTATACTAT AATTACATAA GAGGTTGATT CATGTTACAA CAAATAAGTG GGATCATGCA TCAACTTAAT TGAGCTGATT
ATACAAAACG AGTCAATTAA TAATTGAATG CTATTCTGTT AACAATGACT TTTAATCAAA CAATTTAAAT TCTATATTCT
TACCTTCAAT AGGATGTAAT TTTATGGTAT TTTTTGTTGA AATAGCTGTT TTTCAAAAGC TTTCTTAGGC TTACAATTTC
TTGACATCAG CTATTCATGA ACTGTAATAA GTAATTTTTT AAAATTAATT GCATCGCATC AAATAATTGT TAAGCGCCTA
TATGCTGATT AGATGGGTTT GCTTTATTAT GTGGAACCTT TGTAGTTCAT CTGAAATATT TATTTGGGGT GTTGCTTCAG
AGTTGCAAAT AGAAACTAGA TATTACAAGG ATAGCTATAT CATTCCTTAT GCTATACAGT CTATGAGCTT TTTCTGCATT
TTGTCATTGT ATTTTTTAGG ATTACGATCA GTTGATTGAG TTATCTGTTC TTTCATTTTA GCTCTGCTAC CTACATGTAT
TGAAAACTTG GTCCCATGTG GACATTAAAT GAATTTTTCC TCATTTATGC CTGAATTCAC CCAACCTATT ACAATTCTTT
TGATCACCAG AGTGCTCTTT TACCATTAAA CTTCTTGGTA AGAGACATTT TTTATTTTAC TTCCTGTTGC AACATCCCAA
AGGAAGGACC ATGACTTTAG AAGTGAAAGT GATTTGAAGA CGCCGTTGAA ATCCTTTGCA CAAACTGTGC ATGTAGCTTA
ACTCTATATG CCCGGATAAT GAATATAATG TGAGCTAGCT TTTTGGGTTA AATCCAAAGC CATATGCTAC GATGGTTTTA
GAATCTAAGA TAGATTTGTT ATTGGACCAA TTACCATATT ATCCTTCCAC AAAAACCAAG AGTGTTGAGC AGGAAGGGTG
TACTAGAAAA ACCCTAAGTC TCATTAACCA GAGATGCTGT CAAGTTGTCA ATATGATGCA TAAAAGTAGG AAACATTGCT
TACTCTGAGG TAGATTTGTC ATTTTGGGAT TGAGTTGAGC CCAAATTCAT GTTTTAAGAA CATTTGCCTC TGCAAGTGAT
AAAGGAGAGA CTGACACCAA TTTCCATGCC AAATTTGTGC AAGCTGTGAA TCAAGGAAGC CATGTGTGCT GCCACACTAT
CAGTCAAATT GTGAACCAAA CTTTTTATAT ACATGTCACT AACCCTTGCT ATCTTATAAT TAGACTCCAG ATAACGTGTT
CATAGACAGC AATGGGCAAA TTGATTGCAC AGTATTGTAC TCATTCATGT GACGATTATC ATTGGCCATC CCAGTCTTAT
TCTTCGTTAT CTAATACAAT CAAATGGAGC TGGCCATGCT GATGCTTAAA CTTTCCAGGG GAGAATGGCT CATTACAGAG
CTAATATATG GTAATACATG TGACAATCAC AGCTGACCCC TGAAACACTA CTTTGGAATT TCTAATAAAA ATTCAAACTA
TGGTTTCCTT GGGATGAACT TTTAATTATG CATTCCTAGA ATTGTGGACT GGGCAAATTG AAAAATCTGA GAAAGAGAAT
GTATTTCACA TAGGGATGTC AATTGTAATG AATGGATATC CATAAAATTA CCAATAAAAT GGATCTAGTT ATGACTAATT
ACTCACAAAA AAATTGTCAG TATGGGTACT ATACTACCCA ACCATCATTA TTCACTAAAT GGTGGAAGTT TTTTAATGCC
TGAAATTTTC ATGACTTGGG CGAGCTTAAG GGAAGTAGCT CTTTGATTAG GTTAAGGGGC CCGATAATTC CACTAATATG
TGTATGTTTA TTGATAGAGA ACTTGATCCA AGATCGTTAT ATGTTTACAA CTTGTAGCCA GAACGATTTT GTATTCTTGA
TCTATCCTTC TAGACTCTAT GTTGGTCTTT TTTAAAGCTT TGACGAAGGA TTTTTTGTTA TTACCTGTAG TTTACACAGT
CAAACACATT GCAGGAAATT TTGTACTTAT TTAATTGACT GTTTTTTCAC TTTTTGTAGG GCCCTTATAT TAACGGTAAT
GAGATATGTG CAGCTGACCT ATCACTTGGA CCAAAGCTAT ACCATTTGGA GATTGCTCTG GGGCATTATA AGAAATGGAC
AGTACCTGAT TCACTTACCT CTTTGAAGGC TTACACGAAG GTATGTTCTG GACGAGCCTA TGTACTTAAC ATCTCCAATA
CATTTTTTAT ACTTGAAGAC ACTTTTCAAA ACTAAAATGT GTGCGTGCAT GAAGCTACTT CCCTAGATCC ATATGTATGC
TAATGATGAT TCTCAAACGT TTATGGTTTA TTAAATCTGT GGTAATAATG TCCGAAAGAT ATTCATCAAT GTCGATGTCG
AAAACCATAG AATAATGTAT GGAAATGGTT ATTAACAGGA AGAAAGACCT TAGCTCTGAA CTTGTGCAGA ACATAAAACT
TGAATCATTT CATTAAAGAA GCAGAAGTAT CATCTGCTTC TGAATATCTG GAGTGTTTAC TAATGGCTGT TCCAGTGCTA
GAAAAGTTAA AACCTTCATT CAATGAAATT CCCTTATGCT AGTTTTGCGG ATGTATATTA AATCCTAGTG TTAGTTTCTG
AATGGTGTTA ACTAACTGGT GGTTTGTCAG ATAGTTGAGC CTTGTTGAGT TAAAATTCTT TGTTTGAGTT TGCCATGCGT
GGAGCTAAGA ATGCTTTGAA AACTCTTTTG TTGGTGAAAA TGCAGGCGAT TTTCTCGAGG GAATCGTTCA TTAAAACAAG
TGCACAACCG CAGGATGTCA TTGAAGGTTG GCGTCCTAAA GTAGAAGGCT AATAATATCC ACTGGTCACA CTCATTTTCA
TTACACTCTC ACGACTATAC CCCCGAGGAA CAATGTATGA AGAATTGAAA GACCTGTATC GTTTTGTATT ATAATCTTAC
TCATTCACTA TGAATTATGG AATAAATATT TATTAACAAT AGTTGGTCTC AGATTGTAAC ATGTTTGATA TGAGTCCTGA
ATGAAAATAG TTGCATTAAG GCGAAACATC TTGAGTGTAA AAACAATGAA AGGAGTCTCA TAAAAAAACC AAAAAGATGG
AAGCAAATTT CAGAATTCTG ATGAGTAATT TGTCTCTTGA GAGATTGAGA CGAAACATTG CTTTCAATTT TGG

>Vigan.04G367200.01
TCAAGCATAA AACCATGATG TTGTGAAATG TTGGATAGTG CCACGTAAAC ACCACCGGAA CCAAAACCAC AACGAAACAT
CATCGTCAAC ATCGGGTTCG GAGTAGAAGC TGCAATGTCC ACTGCGAGAG TTCAAGTTTC GGCGTGTGCG CTTTCCGCTG
CCGTCAACAA CCTCCGTCTC CGGCCAACCG CCGTCGTTTC CTTCACCAAC CATTTCAGGA AGAAGTCTCT GAGGGTGGTG
TCAATGTCGT CCGTTCCCCC TTCCCAACCC TTCGAAATCG CCGTTAAAGC TTCCGTCACT ACACCCAATA GGCTCGGCGA
CTGTCCCTTT TGCCAAAGGG TATTACTAAC ACTGGAAGAA AAACATCTAC CTTATGAACC CAAGTTGGTG GATTTCACCA
ACAGACCAGA ATGGTTCCTT AAAGCCAATC CTGATGGTAA AGTTCCTGTC ATAAAGTTTG ATGAGAAGTG GGTTCCGGAT
TCAGATGTTA TCACTCAAAC ATTGGAAGAG AAGTATCCTA TCCCACCATT GGTGACCCCA CCCGAAAAGG CCACAGTAGG
TTCAAAGATA TTTTCTACAT TTATTGGATT TCTCAAGAGC AAGGATCCCA ATGATGGAAC AGAACAAGCA TTACTAAGTG
AACTGAGCTC TTTCAATGAT TACATAAAGG AAAATGGCCC TTATATTAAC GGTAATGAGA TATGTGCAGC TGACCTATCA
CTTGGACCAA AGCTATACCA TTTGGAGATT GCTCTGGGGC ATTATAAGAA ATGGACAGTA CCTGATTCAC TTACCTCTTT
GAAGGCTTAC ACGAAGGCGA TTTTCTCGAG GGAATCGTTC ATTAAAACAA GTGCACAACC GCAGGATGTC ATTGAAGGTT
GGCGTCCTAA AGTAGAAGGC TAATAATATC CACTGGTCAC ACTCATTTTC ATTACACTCT CACGACTATA CCCCCGAGGA
ACAATGTATG AAGAATTGAA AGACCTGTAT CGTTTTGTAT TATAATCTTA CTCATTCACT ATGAATTATG GAATAAATAT
TTATTAACAA TAGTTGGTCT CAGATTGTAA CATGTTTGAT ATGAGTCCTG AATGAAAATA GTTGCATTAA GGCGAAACAT
CTTGAGTGTA AAAACAATGA AAGGAGTCTC ATAAAAAAAC CAAAAAGATG GAAGCAAATT TCAGAATTCT GATGAGTAAT
TTGTCTCTTG AGAGATTGAG ACGAAACATT GCTTTCAATT TTGG

>Vigan.04G367200.01
ATGTCCACTG CGAGAGTTCA AGTTTCGGCG TGTGCGCTTT CCGCTGCCGT CAACAACCTC CGTCTCCGGC CAACCGCCGT
CGTTTCCTTC ACCAACCATT TCAGGAAGAA GTCTCTGAGG GTGGTGTCAA TGTCGTCCGT TCCCCCTTCC CAACCCTTCG
AAATCGCCGT TAAAGCTTCC GTCACTACAC CCAATAGGCT CGGCGACTGT CCCTTTTGCC AAAGGGTATT ACTAACACTG
GAAGAAAAAC ATCTACCTTA TGAACCCAAG TTGGTGGATT TCACCAACAG ACCAGAATGG TTCCTTAAAG CCAATCCTGA
TGGTAAAGTT CCTGTCATAA AGTTTGATGA GAAGTGGGTT CCGGATTCAG ATGTTATCAC TCAAACATTG GAAGAGAAGT
ATCCTATCCC ACCATTGGTG ACCCCACCCG AAAAGGCCAC AGTAGGTTCA AAGATATTTT CTACATTTAT TGGATTTCTC
AAGAGCAAGG ATCCCAATGA TGGAACAGAA CAAGCATTAC TAAGTGAACT GAGCTCTTTC AATGATTACA TAAAGGAAAA
TGGCCCTTAT ATTAACGGTA ATGAGATATG TGCAGCTGAC CTATCACTTG GACCAAAGCT ATACCATTTG GAGATTGCTC
TGGGGCATTA TAAGAAATGG ACAGTACCTG ATTCACTTAC CTCTTTGAAG GCTTACACGA AGGCGATTTT CTCGAGGGAA
TCGTTCATTA AAACAAGTGC ACAACCGCAG GATGTCATTG AAGGTTGGCG TCCTAAAGTA GAAGGCTAA

>Vigan.04G367200.01
MSTARVQVSA CALSAAVNNL RLRPTAVVSF TNHFRKKSLR VVSMSSVPPS QPFEIAVKAS VTTPNRLGDC PFCQRVLLTL
EEKHLPYEPK LVDFTNRPEW FLKANPDGKV PVIKFDEKWV PDSDVITQTL EEKYPIPPLV TPPEKATVGS KIFSTFIGFL
KSKDPNDGTE QALLSELSSF NDYIKENGPY INGNEICAAD LSLGPKLYHL EIALGHYKKW TVPDSLTSLK AYTKAIFSRE
SFIKTSAQPQ DVIEGWRPKV EG*