GBrowse Details

Vigan.04G328800.01

Basic Information:
Name: Vigan.04G328800.01
Multiple alignment
Variant Information
Position: Chr04:45111463..45114498 (- strand)
Length: 3036
Functional Information:
Description: Similar to aquaporin PIP2-7-like. [XP_003521392.1, Glycine max]
GO: Biological Process: transport (GO:0006810)
Cellular Component: membrane (GO:0016020)
Molecular Function: transporter activity (GO:0005215)
InterPro: Major intrinsic protein (IPR000425)
Major intrinsic protein, conserved site (IPR022357)
Aquaporin-like (IPR023271)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.11,0.09,33.27,148.09,0.06,47.36,0.42,10.06
Automatic updates:
Name: KR185762 NCBI(nuccore)
Organism: Vigna unguiculata
Description: Vigna unguiculata plasma membrane intrinsic protein (PIP2;1) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:45111463..45112328 (- strand)
Length: 866
Type: three_prime_UTR
Position: Chr04:45112329..45112448 (- strand)
Length: 120
Type: CDS
Position: Chr04:45113391..45113531 (- strand)
Length: 141
Type: CDS
Position: Chr04:45113639..45114232 (- strand)
Length: 594
Type: CDS
Position: Chr04:45114233..45114498 (- strand)
Length: 266
Type: five_prime_UTR

>Vigan.04G328800.01 class=Sequence position=Chr04:45111463..45114498 (- strand)
CAGAAGACAC TGAAAGGGGT TAATCAGAAG CATAGAAGTA CAAAGGTGGG TTCAGTGGGG GCAGGGTAAG AGTGAAAATT
GTAATCAGCC ATTGGAAAAG GAAGTCTTAG TGAAAATTTT ACTTCAGCCA TCAAACTCAA GCAACGGTAC CACACGCCAT
ATCAACAGCA TGTTCCCTTG TATATATAGA TACACTTGCT TCCATAATTT CCTGTGAACC TTATCACATA GCACAACACC
GCTGAATCTT GCTAACTCCC ACAACCATGG CCAAGGACAT AGAAACCGAG GTACCAATTG AATTGACCCA CAAGGACTAT
TACGACCCAC CCCCAGCCCC ATTCTACGAC GCCGCCGAGC TCCGCAAGTG GTCCTTCTAC AGGGCCCTCA TCGCCGAGTT
CGTCGCCACC CTCCTCTTCC TCTACGTCAC CATCCTCACC GTCATCGGCT ACAACCACCA GATCCACCTC GGCGACTCCT
GCGATGGCGT CGGCATTCTC GGCATCGCCT GGGCCTTCGG CGGCATGATC TTCGTCCTCG TCTACTGCAC CGCGGGCATT
TCCGGGGGTC ACATAAACCC CGCCGTCACG TTCGGGTTGT TTCTTGCCAG GAAGGTGTCG CTGGTGAGAG CGATCGCGTA
CATGGTGGCT CAGTGCTTGG GAGCTATATC TGGCGTGGGG CTGGTAAAGG CATTTCAGAA GAGCTACTAC AACAGGTACA
ATGGTGGCGT GAACTTGCTC TCTGATGGGT ACAGTAAAGG CACTGGCTTG GGCGCTGAGA TTATTGGCAC CTTTGTTCTT
GTCTACACTG TCTTCTCCGC CACCGATCCC AAGAGAAAAG CCAGAGATTC TCATGTTCCC GTAGGTTTTT CTTTTTACTT
TCACTCATAA GGATCCACAT AACACTAAAA ATCTCTATAC CAGATTAATT TGATACAGAA CCTTGAGTCA GTAAAATACA
TATGCAGGTT TTGGCACCAC TTCCAATTGG GTTCGCGGTG TTCGTGGTTC ACTTGGCCAC CATCCCTGTC ACCGGCACTG
GCATCAACCC CGCCAGAAGC TTCGGCCCTG CTGTCATACT CAACAACGAG AAAGCATGGG ATGACCAGGT ACGAGATCCA
TGCATATATT TCATTTCAGT TTTTCTGTGT AACTTTTATG TCAAAAAAAA ACATCAACGA TGAAACAGTT TATAAGTCCT
ACTGTACTTC TCACATGAAG TGGATGCGTT TCAAATATAT TTGGGTTAAT ATGTACGTAT AATCTGTCCT TGTAATCTAT
TATAATTGAA CAAATTTTTG TTTAGATGAA TTTGTCGAAA GTGGTCTTTA AAATAATTAT TTTATTCGGA TGAAATAAAA
AATCAGTTTT TTCTTTACCA GAAAAATAGT AGCTTATGAA GACAAAAAGA GAAAAGAAAA ATGTTAAGAA ATAACCCTAA
TTTATAAATG TTCTCATTCA ATTAACTTGT TTAAAAACAA TTATTTATTT TTCCAAATAT TTAGCTGAAA TTGCAAACAT
TTTTTTTTTC CATACATGTT CTTATTGATA AATATTTTGT AATGATTTAA TTAACAATTT ATAGTATTTG TTAATTAGTC
AAACTATTAC CTAAACTATT CATAATTAAG TTTAATAATA ATTTAATAAG TTCATTAATC TAGTTAATAA CATTAAACTT
GTTACTAATT AATGTATATT ATCGTTTAAA ATTACCCTTA AATCAAGGCT ACCAATTTTA CTTTCACTTA ATTACTTTCC
TCATAGTTAA TAATTAATGC TGACTATTAT CTTTAATATT TCATAGTAAA TAGTACTTAT CAAGTAAAAA AAAATGTAAA
GGTATTAGTC ACATTTTATT AAAAAAAAAA AGTAGTTAAT AAAAGAAACA ATGAAGCTTG TAAAAGAGAC AAAAATAAGA
TTTTACCGAG AATGTGGTCA TTAAACTATT TTTAACCTAC ACAAATGAAA AAATGTAATT TTTGTTACCA AATTTGGTTC
TGATACCTTA AGTTTTAATT GGGTTCTGAA AATTGTTTTG GAATGGTTAG TGGATCTTCT GGGTCGGACC TTTCATCGGT
GCAGCCATTG CTGCAGTCTA CCACCAGTAC GTATTGAGGG CACAAGCGGC AAAGGCTCTC GGGTCATTCA GGAGCTCCTC
GCACCTGTAA CTCCAACAAA ACCACATGGA GACAGCCTTA ATTAATCGTA TTCGATGGAT CTTGGATTTG GGATTTGTAT
ATCCTCGTCA CTGTGTGTAT TTATTTATGT TTACTATTTG CGGTAACGTC CATTCAACGG ACATGCATGT CCATGTTAAT
TTGTGTATGC ATATCTTTAA TCCTCTATCC TACATGTGCG CTAATTACCT GTGGCTGTGG TTCTCGGGCG ATGATAGGAT
CACATGTAGT AGTGAAGAGG TGTTTCTGAG AGCGAGATCG TTGTACCGTG TCTATTTAAC TGTGTCGCGA TTAATGGATT
TATCTATGGG TGTGGTCCAT GATTGTTTAA TTTTTCTGTT CTGAAATGAA AGGTGGTGTG GTCCAGTACG GATTTTTATT
GGACTGAGAA TCTTTTCCCC CGGGGTGATC AATGACGTCC CTGTCTTTAC TCGTTACATG CTTTATGCAT GGATGGATGA
GGGGGACCAA ACTCCTTTCC AAACTGTCTA TTTTATTTCA ACGTTAGGAG GTGAACAAAT TTGAAAACCA AAACTCATAA
ACTACATGTT AGTGTGAAAC TTTCTGAATG TTTGTCATTT TACCCACCAA ACATATCTGT CATTATCCAA GATGGGTAAG
TGTATGCAAG GTGCAAATTT AGCCAACTTG TGATGCGAGC GATGCGATTG CGACTTTTTG TTGGAAGTTA TCCAGGGAAG
GATTTGGTTT TTCGATCGAG TTCCACGATT CACATGCTCC CATGGGTTAT GGAATTCATA TATACAAGTT CAGTACTTAA
TGAAAATAGC AAATTTGTAC TTCGGCAGTA GATTTTGTTT AAGTTTGTAA CTTCAATAGT TTAAGATAAA GAGGAA

>Vigan.04G328800.01
CAGAAGACAC TGAAAGGGGT TAATCAGAAG CATAGAAGTA CAAAGGTGGG TTCAGTGGGG GCAGGGTAAG AGTGAAAATT
GTAATCAGCC ATTGGAAAAG GAAGTCTTAG TGAAAATTTT ACTTCAGCCA TCAAACTCAA GCAACGGTAC CACACGCCAT
ATCAACAGCA TGTTCCCTTG TATATATAGA TACACTTGCT TCCATAATTT CCTGTGAACC TTATCACATA GCACAACACC
GCTGAATCTT GCTAACTCCC ACAACCATGG CCAAGGACAT AGAAACCGAG GTACCAATTG AATTGACCCA CAAGGACTAT
TACGACCCAC CCCCAGCCCC ATTCTACGAC GCCGCCGAGC TCCGCAAGTG GTCCTTCTAC AGGGCCCTCA TCGCCGAGTT
CGTCGCCACC CTCCTCTTCC TCTACGTCAC CATCCTCACC GTCATCGGCT ACAACCACCA GATCCACCTC GGCGACTCCT
GCGATGGCGT CGGCATTCTC GGCATCGCCT GGGCCTTCGG CGGCATGATC TTCGTCCTCG TCTACTGCAC CGCGGGCATT
TCCGGGGGTC ACATAAACCC CGCCGTCACG TTCGGGTTGT TTCTTGCCAG GAAGGTGTCG CTGGTGAGAG CGATCGCGTA
CATGGTGGCT CAGTGCTTGG GAGCTATATC TGGCGTGGGG CTGGTAAAGG CATTTCAGAA GAGCTACTAC AACAGGTACA
ATGGTGGCGT GAACTTGCTC TCTGATGGGT ACAGTAAAGG CACTGGCTTG GGCGCTGAGA TTATTGGCAC CTTTGTTCTT
GTCTACACTG TCTTCTCCGC CACCGATCCC AAGAGAAAAG CCAGAGATTC TCATGTTCCC GTTTTGGCAC CACTTCCAAT
TGGGTTCGCG GTGTTCGTGG TTCACTTGGC CACCATCCCT GTCACCGGCA CTGGCATCAA CCCCGCCAGA AGCTTCGGCC
CTGCTGTCAT ACTCAACAAC GAGAAAGCAT GGGATGACCA GTGGATCTTC TGGGTCGGAC CTTTCATCGG TGCAGCCATT
GCTGCAGTCT ACCACCAGTA CGTATTGAGG GCACAAGCGG CAAAGGCTCT CGGGTCATTC AGGAGCTCCT CGCACCTGTA
ACTCCAACAA AACCACATGG AGACAGCCTT AATTAATCGT ATTCGATGGA TCTTGGATTT GGGATTTGTA TATCCTCGTC
ACTGTGTGTA TTTATTTATG TTTACTATTT GCGGTAACGT CCATTCAACG GACATGCATG TCCATGTTAA TTTGTGTATG
CATATCTTTA ATCCTCTATC CTACATGTGC GCTAATTACC TGTGGCTGTG GTTCTCGGGC GATGATAGGA TCACATGTAG
TAGTGAAGAG GTGTTTCTGA GAGCGAGATC GTTGTACCGT GTCTATTTAA CTGTGTCGCG ATTAATGGAT TTATCTATGG
GTGTGGTCCA TGATTGTTTA ATTTTTCTGT TCTGAAATGA AAGGTGGTGT GGTCCAGTAC GGATTTTTAT TGGACTGAGA
ATCTTTTCCC CCGGGGTGAT CAATGACGTC CCTGTCTTTA CTCGTTACAT GCTTTATGCA TGGATGGATG AGGGGGACCA
AACTCCTTTC CAAACTGTCT ATTTTATTTC AACGTTAGGA GGTGAACAAA TTTGAAAACC AAAACTCATA AACTACATGT
TAGTGTGAAA CTTTCTGAAT GTTTGTCATT TTACCCACCA AACATATCTG TCATTATCCA AGATGGGTAA GTGTATGCAA
GGTGCAAATT TAGCCAACTT GTGATGCGAG CGATGCGATT GCGACTTTTT GTTGGAAGTT ATCCAGGGAA GGATTTGGTT
TTTCGATCGA GTTCCACGAT TCACATGCTC CCATGGGTTA TGGAATTCAT ATATACAAGT TCAGTACTTA ATGAAAATAG
CAAATTTGTA CTTCGGCAGT AGATTTTGTT TAAGTTTGTA ACTTCAATAG TTTAAGATAA AGAGGAA

>Vigan.04G328800.01
ATGGCCAAGG ACATAGAAAC CGAGGTACCA ATTGAATTGA CCCACAAGGA CTATTACGAC CCACCCCCAG CCCCATTCTA
CGACGCCGCC GAGCTCCGCA AGTGGTCCTT CTACAGGGCC CTCATCGCCG AGTTCGTCGC CACCCTCCTC TTCCTCTACG
TCACCATCCT CACCGTCATC GGCTACAACC ACCAGATCCA CCTCGGCGAC TCCTGCGATG GCGTCGGCAT TCTCGGCATC
GCCTGGGCCT TCGGCGGCAT GATCTTCGTC CTCGTCTACT GCACCGCGGG CATTTCCGGG GGTCACATAA ACCCCGCCGT
CACGTTCGGG TTGTTTCTTG CCAGGAAGGT GTCGCTGGTG AGAGCGATCG CGTACATGGT GGCTCAGTGC TTGGGAGCTA
TATCTGGCGT GGGGCTGGTA AAGGCATTTC AGAAGAGCTA CTACAACAGG TACAATGGTG GCGTGAACTT GCTCTCTGAT
GGGTACAGTA AAGGCACTGG CTTGGGCGCT GAGATTATTG GCACCTTTGT TCTTGTCTAC ACTGTCTTCT CCGCCACCGA
TCCCAAGAGA AAAGCCAGAG ATTCTCATGT TCCCGTTTTG GCACCACTTC CAATTGGGTT CGCGGTGTTC GTGGTTCACT
TGGCCACCAT CCCTGTCACC GGCACTGGCA TCAACCCCGC CAGAAGCTTC GGCCCTGCTG TCATACTCAA CAACGAGAAA
GCATGGGATG ACCAGTGGAT CTTCTGGGTC GGACCTTTCA TCGGTGCAGC CATTGCTGCA GTCTACCACC AGTACGTATT
GAGGGCACAA GCGGCAAAGG CTCTCGGGTC ATTCAGGAGC TCCTCGCACC TGTAA

>Vigan.04G328800.01
MAKDIETEVP IELTHKDYYD PPPAPFYDAA ELRKWSFYRA LIAEFVATLL FLYVTILTVI GYNHQIHLGD SCDGVGILGI
AWAFGGMIFV LVYCTAGISG GHINPAVTFG LFLARKVSLV RAIAYMVAQC LGAISGVGLV KAFQKSYYNR YNGGVNLLSD
GYSKGTGLGA EIIGTFVLVY TVFSATDPKR KARDSHVPVL APLPIGFAVF VVHLATIPVT GTGINPARSF GPAVILNNEK
AWDDQWIFWV GPFIGAAIAA VYHQYVLRAQ AAKALGSFRS SSHL*