GBrowse Details

Vigan.04G264600.01

Basic Information:
Name: Vigan.04G264600.01
Multiple alignment
Variant Information
Position: Chr04:38501089..38502324 (+ strand)
Length: 1236
Functional Information:
Description: Similar to methyltransferase DDB_G0268948-like. [XP_003521139.1, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: methyltransferase activity (GO:0008168)
InterPro: Methyltransferase type 11 (IPR013216)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.10,0.03,1.39,12.60,18.88,2.46,11.19,6.45
Arabidopsis thaliana homolog: AT2G41380.1
Structure :
Position: Chr04:38501089..38501295 (+ strand)
Length: 207
Type: five_prime_UTR
Position: Chr04:38501296..38501445 (+ strand)
Length: 150
Type: CDS
Position: Chr04:38501551..38502186 (+ strand)
Length: 636
Type: CDS
Position: Chr04:38502187..38502324 (+ strand)
Length: 138
Type: three_prime_UTR

>Vigan.04G264600.01 class=Sequence position=Chr04:38501089..38502324 (+ strand)
ACTTTCACAG AAATTTCTTC CTCCACGAGT TCATTGCTCT ATGACCAGTC AACTTTATGC AGAAGAACCT AGATCGAAAT
TGCTTTTCTC TATTATTCAT CACTCAATGG AAGCAGTGAC ATCATGATTT TATATATCTT ATCTTTATAT ACAAACACAC
GCAAACACTA TTTATTCACA GAGAGATTAG AAAGCTAAGA AAGAGAAATG GCAGATCTAT TTGTGAAGCA GGCAAAAGAA
TATGCAGATG CAAGACCAAG TTACCCTCCA CAGCTCTTCC AATTCATTGC TTCAAAGACT CCCTCTCACA ACCTTGTTTG
GGATGTTGGT ACTGGAAGTG GCCAGGCTGC AAAATCTGTA TATATATTCA CTTTCTTCTC CTTAAATTTC TTCACTTTCT
GCATGAATTG TTCACTTTTC TCTATAATTG TTTTTCGTTT TGACCTTAGT TTGTGTTTTC AGTTAGCTGC GATATACGAG
AATGTGATAG CCACTGATGC TAGTGCCAAG CAACTTGAAT TTGCAGCCAA GATTTCCAAT GTGCGATACC AGCACACTCC
TTCAACCATG TCAATGGCTG AGCTTGAAAA ACTGGTGGCA TCTGAGGGAA CCGTGGACCT TGTGACCATA GCCCAATCCC
TGCACTGGTT TGACTTGGCA ACCTTCTACC AACAAGTGAA ATGGGTCCTG AAGAAGCCTA ATGGAGTGAT TGCTGCATGG
TGCTACTATT TGCCTAGAGT TTCTGATGAA ATAGACACTG TTCTTGATGA ATTCTATTCC AGTGAAGTAG GCCCTTATTG
GGACCCTGCA CGTAAATTGG TTGATAAGCT TTATGGAAGC ATTGATTTTC CATTTGAAGC TGTGGAGGGT GCTGATCACA
CAGGACCATT TGAGTTCGTG ACAGAGACTT TGATGGATTT GGATGATTTC TTGACTTACA TAAAATCATG GTCAGCGTAT
CAGACGGCTA AGGAGAAAGG AGTGGAGCTT CTTCCGGAAA ATGTAGTTCA AAAGTTCAAG CTTGCTTGGG GAGAAGATGG
TAAAAAAGTT GCCAGGTTTC CTATTTATTT GAGGATGGGA AAAGTTGGGG ATGCCTAGAA ATATGCATAC CAGTTACTTC
GGGTTGGAAG ATGATCTTAC TTGTTTGGTA AAATAAAATA ATTTAATAAT TAATTATTTT CCTTAGTATA AATTTTTATG
TAGAATTTGT TTCTATTACT TAGACACATA TTCAAC

>Vigan.04G264600.01
ACTTTCACAG AAATTTCTTC CTCCACGAGT TCATTGCTCT ATGACCAGTC AACTTTATGC AGAAGAACCT AGATCGAAAT
TGCTTTTCTC TATTATTCAT CACTCAATGG AAGCAGTGAC ATCATGATTT TATATATCTT ATCTTTATAT ACAAACACAC
GCAAACACTA TTTATTCACA GAGAGATTAG AAAGCTAAGA AAGAGAAATG GCAGATCTAT TTGTGAAGCA GGCAAAAGAA
TATGCAGATG CAAGACCAAG TTACCCTCCA CAGCTCTTCC AATTCATTGC TTCAAAGACT CCCTCTCACA ACCTTGTTTG
GGATGTTGGT ACTGGAAGTG GCCAGGCTGC AAAATCTTTA GCTGCGATAT ACGAGAATGT GATAGCCACT GATGCTAGTG
CCAAGCAACT TGAATTTGCA GCCAAGATTT CCAATGTGCG ATACCAGCAC ACTCCTTCAA CCATGTCAAT GGCTGAGCTT
GAAAAACTGG TGGCATCTGA GGGAACCGTG GACCTTGTGA CCATAGCCCA ATCCCTGCAC TGGTTTGACT TGGCAACCTT
CTACCAACAA GTGAAATGGG TCCTGAAGAA GCCTAATGGA GTGATTGCTG CATGGTGCTA CTATTTGCCT AGAGTTTCTG
ATGAAATAGA CACTGTTCTT GATGAATTCT ATTCCAGTGA AGTAGGCCCT TATTGGGACC CTGCACGTAA ATTGGTTGAT
AAGCTTTATG GAAGCATTGA TTTTCCATTT GAAGCTGTGG AGGGTGCTGA TCACACAGGA CCATTTGAGT TCGTGACAGA
GACTTTGATG GATTTGGATG ATTTCTTGAC TTACATAAAA TCATGGTCAG CGTATCAGAC GGCTAAGGAG AAAGGAGTGG
AGCTTCTTCC GGAAAATGTA GTTCAAAAGT TCAAGCTTGC TTGGGGAGAA GATGGTAAAA AAGTTGCCAG GTTTCCTATT
TATTTGAGGA TGGGAAAAGT TGGGGATGCC TAGAAATATG CATACCAGTT ACTTCGGGTT GGAAGATGAT CTTACTTGTT
TGGTAAAATA AAATAATTTA ATAATTAATT ATTTTCCTTA GTATAAATTT TTATGTAGAA TTTGTTTCTA TTACTTAGAC
ACATATTCAA C

>Vigan.04G264600.01
ATGGCAGATC TATTTGTGAA GCAGGCAAAA GAATATGCAG ATGCAAGACC AAGTTACCCT CCACAGCTCT TCCAATTCAT
TGCTTCAAAG ACTCCCTCTC ACAACCTTGT TTGGGATGTT GGTACTGGAA GTGGCCAGGC TGCAAAATCT TTAGCTGCGA
TATACGAGAA TGTGATAGCC ACTGATGCTA GTGCCAAGCA ACTTGAATTT GCAGCCAAGA TTTCCAATGT GCGATACCAG
CACACTCCTT CAACCATGTC AATGGCTGAG CTTGAAAAAC TGGTGGCATC TGAGGGAACC GTGGACCTTG TGACCATAGC
CCAATCCCTG CACTGGTTTG ACTTGGCAAC CTTCTACCAA CAAGTGAAAT GGGTCCTGAA GAAGCCTAAT GGAGTGATTG
CTGCATGGTG CTACTATTTG CCTAGAGTTT CTGATGAAAT AGACACTGTT CTTGATGAAT TCTATTCCAG TGAAGTAGGC
CCTTATTGGG ACCCTGCACG TAAATTGGTT GATAAGCTTT ATGGAAGCAT TGATTTTCCA TTTGAAGCTG TGGAGGGTGC
TGATCACACA GGACCATTTG AGTTCGTGAC AGAGACTTTG ATGGATTTGG ATGATTTCTT GACTTACATA AAATCATGGT
CAGCGTATCA GACGGCTAAG GAGAAAGGAG TGGAGCTTCT TCCGGAAAAT GTAGTTCAAA AGTTCAAGCT TGCTTGGGGA
GAAGATGGTA AAAAAGTTGC CAGGTTTCCT ATTTATTTGA GGATGGGAAA AGTTGGGGAT GCCTAG

>Vigan.04G264600.01
MADLFVKQAK EYADARPSYP PQLFQFIASK TPSHNLVWDV GTGSGQAAKS LAAIYENVIA TDASAKQLEF AAKISNVRYQ
HTPSTMSMAE LEKLVASEGT VDLVTIAQSL HWFDLATFYQ QVKWVLKKPN GVIAAWCYYL PRVSDEIDTV LDEFYSSEVG
PYWDPARKLV DKLYGSIDFP FEAVEGADHT GPFEFVTETL MDLDDFLTYI KSWSAYQTAK EKGVELLPEN VVQKFKLAWG
EDGKKVARFP IYLRMGKVGD A*