GBrowse Details

Vigan.04G237200.01

Basic Information:
Name: Vigan.04G237200.01
Multiple alignment
Variant Information
Position: Chr04:34922857..34926633 (+ strand)
Length: 3777
Functional Information:
Description: Similar to Apyrase. [Q5NT85, Vigna unguiculata subsp. unguiculata]
GO: Molecular Function: hydrolase activity (GO:0016787)
InterPro: Nucleoside phosphatase GDA1/CD39 (IPR000407)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.03,0.03,22.92,37.09,48.55,46.75,6.68,1.07
Automatic updates:
Name: NM_001353363 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max ecto-apyrase GS52 (GS52), mRNA.
PubMed ID: 21346172 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr04:34922857..34922939 (+ strand)
Length: 83
Type: five_prime_UTR
Position: Chr04:34922940..34923215 (+ strand)
Length: 276
Type: CDS
Position: Chr04:34923309..34923437 (+ strand)
Length: 129
Type: CDS
Position: Chr04:34923902..34923958 (+ strand)
Length: 57
Type: CDS
Position: Chr04:34924048..34924140 (+ strand)
Length: 93
Type: CDS
Position: Chr04:34924766..34924971 (+ strand)
Length: 206
Type: CDS
Position: Chr04:34925149..34925240 (+ strand)
Length: 92
Type: CDS
Position: Chr04:34925346..34925560 (+ strand)
Length: 215
Type: CDS
Position: Chr04:34925658..34925847 (+ strand)
Length: 190
Type: CDS
Position: Chr04:34925949..34926091 (+ strand)
Length: 143
Type: CDS
Position: Chr04:34926092..34926633 (+ strand)
Length: 542
Type: three_prime_UTR

>Vigan.04G237200.01 class=Sequence position=Chr04:34922857..34926633 (+ strand)
AACAAACATT ACCCTAGACT TTGTCTATTT ATATGTTTGA GAGTGAATGT TGCAGCGTTG AGAGTTAGTT GACTGGTTTG
AGAATGGTTT TGGTGTGGTC AAGAAAAGGG ACAAAGAACA TGGACTTAAC TCTCTTTTCA CTTCTATTCT TGTTACTATT
GCCTGCACTC TCTTCTTCCA TATATGTTGG GAACAATATC TTGTTCAATC ATCGCAAGAT ATTCCCCAAA CAACAAGAAC
TTACTTCGTA CGCTGTGATC TTTGATGCCG GTAGCACTGG TAGCCGTGTC CATGTCTTTC ATTTCGACCA GAACTTAGAT
CTTCTTCACA TAGGCAACGA GATTGAGTTT TATGATAAGG TGAAAATTAA GCTTCATAAG TATTATAGTT TATACATGTT
CATGTGAATC ATGGGTTTCT CTTCATTACT TCTTGGCATG TTTGTGGTGT AGGTGACACC TGGTTTGAGT GCATATGCGG
ATAATCCTGA AAATGCAGCA AAATCTCTGC TTCCACTTTT GGAGGAAGCT GAAAGTGTTG TCCCTGAGCA CCTCTACCCC
ACCACACCTG TTAAACTTGG GGTTCGTGTT ATGCCTCTCT ATTTCTCACT CATTCCTCAT AATTTCCAAT ATATTTCTCT
TATGTCGAAC CATAGGTATA TCAAATGTAA AATTAAATAA TAATAATAAT CCAACAACAT ATGACCATAT ACATTTTTTT
AAGATAAGTT TATATATCTT AAAAATTGTA AATCTAATTC AATATTACAC AATTAATTTA TAAAATAAAG TTTGCATTTG
TTTATATTTT AAATTTATTT AATTGTACTG AATGTAACAT CTGCAACATA GAATTTCCCA TATAAAATAT TTCATCAGCA
ATTGAAGTTT TGACGGTAAT TGAAAACCTT GTTTGAGTAG ACAAGATATA TGCATAATAT GTTTGTTTAA GTCTTGAATA
TAATTAGAAA TGTCTAATTA TTTGTTACTA TGTAAAGGGA GTAATGAGTA CTGTATTTTG AGTAACCTTT ATGCTATATA
TGCAGGCGAC TGCAGGTCTA AGGCTTTTGG ATGGGGATGC TTCTGAAAGG ATATTGCAAG CGGTAATTAA ATAAAGGATC
TTAAATTCTT TATCTTTTTC TCGTGTAGGC TTTCAAAATC TAAGGTTTTG ATTTTTCTTA TGTTTAATTA GGTTAGCGAT
TTGCTCAAGA ACAGAAGTAC CTTCAGCGTT CAACCAGATG CTGTAGCTAT AATTGATGGA ACCCAAGAAG GTTCTTATCT
ATGGGTACGA CTTATCAATA TCTGTTATGG TGATAAAGAA AAAATAATCA AAATCTGCAC TAATCACTTT TATTTTTGAC
CACTTAATCC CCGTTGTAAA TTCTGTCAAT TTATTTTAGC TTACAATAAT ATTTATAGTT TTTCTGTCTT CTTAATGTCA
TATAGCATTT CATATGTTGA TGTGACTTGT TTTTACGCAC CAATGTCTCA AATTATTCTA GTGTTTACTA ACCAAATTAA
TTGTACTAAA TCGATTATCG TTATATTATT ATATATATTG CAGAATAACA CGATTTAGTT ACGAAAAAAT TTACAGCTCT
TTTAAAACAA ACTCTTCTAA TTTTGGGTTA TTGATGATTA TTGGTTATAT TGGTATATGC TATTTTAAAA TACTGTTCAT
CCAATCACAT TTTAAAAGTC TGGTTACAAT AAAATACAAT ATTACTATTC ATCCAATTGT GGAGGTATCT TTATTGTATT
AGTGTAAAAA TTAATAGGAG TAGGTGGTAC TTTAACTTTT AGCATATAGT TAATTATAAA TTTTACATAA TTCCATTTCT
GTGAAACATC ATCAAAGAAA CATTAGTAAC ATGATATTTC GTCTCTCTTA CCATTCAACT ATTTTGTAGG TGACAGTAAA
CTATTTACTA GGGAATTTGG GGAAGAATTT TTCAAAGACA GTGGGAGTAG TTGATCTTGG AGGTGGATCG GTTCAAATGA
CATATGCTGT CTCAAAGAAC ACAGCAAACA ATGCTCCACA ACCACCAGAA GGAGAGGAAC CTTACATAAA GAAACTTGTC
CTCAAGGGAA AGAAATATGA CCTCTATGTT CACAGGTTCT CTTCTTTCTA ACTATTGATA TACTAGTAAG TGTTGAAGTG
TGAGTAGATG CTGTGCAGTA CAACTTCTGA TAGAAAAACC TCATGGACAA GCCTTCCGAG TTGTTTCAAT TTGAAGTCTA
GATAAATAGG TACCTATTTA TCTAATATGT AGTTTTAACA TTCTTCTTTC AGTTACTTGC GCTATGGTAG AGAGGCATTT
CGTGCTGAGG TTTTGAAGGT CACTGATGGT TCTGCTAACC CTTGTATTTT ATATGGCTTT GATGGTAAGT GCATTTACAC
ATGCCCAGAT GCTAATTGAT GGTGAAAAAT CTTCCAATAT TTTTATCATG CATGACAATA ACAGAGTACA CGATTTTATT
CCTTGAAAGG GACCTACACA TATTCTGGAG AAGACTATAA GGCCTTTGCT CCCATTTCTG GATCCAACTA CCATGAATGC
AGAAAGATAG CTCTTCAAGC TCTGAAAGTG AACCAGTTTT GCCCCCACCG AAATTGTAGT TTTGGAGGGA TATGGGATGG
TGGAAAGGGA AGTGGACAAA ACATTCTTTT CGGCACTTCA TCTTTCTATT ATCTGCCTTC GGAGGTATCT AATTATATTT
GGTCAAATTT GTTGTGTCTA CAGGTTCTTA TTTTGACTAT TGCACATGCT CATTTTAATT ATGTTATGTT GGATACATTA
GATTGGTATG TTTAATCCAA ATAAACCCAA CTCCAAGATT CATCCTTTGG ATTTGAAGAC TGAAGCAAAG AGAGCTTGTG
AAACAACATT TGAGGATGCC AAATACACTT ATCCACTTCT TTCAGCTGAT AAACTTCCAT ATGTATGCTT GGACCTTACA
TACCAGTATG CATTGTTTAC TGATGGATTT GGTAGGTTTC TCCAATGAAG TTTTTTCCAA AATGTGTTGC AACTTTATTT
ATTGTCCTAA TATACTGAAT TTTTATTTTA TTTTTGTTTT CATATTTGGC AGGCTTAGAT CCATTGCAAG AGATCACAAT
GGCAAATCAA ATTGAATATC AGGAAGCACT TGTGGAAGCA GCATGGCCTT TAGGCACTGC CATAGAAGCC ATATCTTCAT
TGCCTAAATT TGATCCATTC ATGTATTTTA TTTAAGTGCT GGCATATTTC AGTGCTAAAG GGCACTATAA AAACCTACTG
AATAAAATAT TAAAACTTAA GCCATTTCTT CATACAGAGA AAGAAATATT CTTATTTTTA TGTCGATTTG AAGATTTTAT
GGGAAGAATT GGAATCTTTA AGGACAATAC CAAAAACTAC ACATGCAACA CCAAATGAAA CCATGATCTT GTAAAAGTCA
TGGTTAAATA TAAAGATTCT AAATATGTCA TGCTTCTTGA AAAGTCCTGG GGAAATGTTT GTTGCTTTCA AGACGAAAAT
CCTTTTAACA TTAATCATGT CTTTCCCCTG GTGCTTCAAC AAATCACTAC TACAAACTCG GATGCAAGAT TCCAACCAAA
ATCAAAACAA GTCCAACTTC TCTTGGAAAT GCTACAAGAC TAAATGATTA ACTTTTCACA CAGCATCAAT TAGATTAAAG
GGTACATTGG TGAGTCTTCC ACTCAATAAC CTGGAAAAGG TAAAACCACT GAATATTCTT GGATGTTGGA TAAAGGGGCC
ACTAATATCT ATAAAAT

>Vigan.04G237200.01
AACAAACATT ACCCTAGACT TTGTCTATTT ATATGTTTGA GAGTGAATGT TGCAGCGTTG AGAGTTAGTT GACTGGTTTG
AGAATGGTTT TGGTGTGGTC AAGAAAAGGG ACAAAGAACA TGGACTTAAC TCTCTTTTCA CTTCTATTCT TGTTACTATT
GCCTGCACTC TCTTCTTCCA TATATGTTGG GAACAATATC TTGTTCAATC ATCGCAAGAT ATTCCCCAAA CAACAAGAAC
TTACTTCGTA CGCTGTGATC TTTGATGCCG GTAGCACTGG TAGCCGTGTC CATGTCTTTC ATTTCGACCA GAACTTAGAT
CTTCTTCACA TAGGCAACGA GATTGAGTTT TATGATAAGG TGACACCTGG TTTGAGTGCA TATGCGGATA ATCCTGAAAA
TGCAGCAAAA TCTCTGCTTC CACTTTTGGA GGAAGCTGAA AGTGTTGTCC CTGAGCACCT CTACCCCACC ACACCTGTTA
AACTTGGGGC GACTGCAGGT CTAAGGCTTT TGGATGGGGA TGCTTCTGAA AGGATATTGC AAGCGGTTAG CGATTTGCTC
AAGAACAGAA GTACCTTCAG CGTTCAACCA GATGCTGTAG CTATAATTGA TGGAACCCAA GAAGGTTCTT ATCTATGGGT
GACAGTAAAC TATTTACTAG GGAATTTGGG GAAGAATTTT TCAAAGACAG TGGGAGTAGT TGATCTTGGA GGTGGATCGG
TTCAAATGAC ATATGCTGTC TCAAAGAACA CAGCAAACAA TGCTCCACAA CCACCAGAAG GAGAGGAACC TTACATAAAG
AAACTTGTCC TCAAGGGAAA GAAATATGAC CTCTATGTTC ACAGTTACTT GCGCTATGGT AGAGAGGCAT TTCGTGCTGA
GGTTTTGAAG GTCACTGATG GTTCTGCTAA CCCTTGTATT TTATATGGCT TTGATGGGAC CTACACATAT TCTGGAGAAG
ACTATAAGGC CTTTGCTCCC ATTTCTGGAT CCAACTACCA TGAATGCAGA AAGATAGCTC TTCAAGCTCT GAAAGTGAAC
CAGTTTTGCC CCCACCGAAA TTGTAGTTTT GGAGGGATAT GGGATGGTGG AAAGGGAAGT GGACAAAACA TTCTTTTCGG
CACTTCATCT TTCTATTATC TGCCTTCGGA GATTGGTATG TTTAATCCAA ATAAACCCAA CTCCAAGATT CATCCTTTGG
ATTTGAAGAC TGAAGCAAAG AGAGCTTGTG AAACAACATT TGAGGATGCC AAATACACTT ATCCACTTCT TTCAGCTGAT
AAACTTCCAT ATGTATGCTT GGACCTTACA TACCAGTATG CATTGTTTAC TGATGGATTT GGCTTAGATC CATTGCAAGA
GATCACAATG GCAAATCAAA TTGAATATCA GGAAGCACTT GTGGAAGCAG CATGGCCTTT AGGCACTGCC ATAGAAGCCA
TATCTTCATT GCCTAAATTT GATCCATTCA TGTATTTTAT TTAAGTGCTG GCATATTTCA GTGCTAAAGG GCACTATAAA
AACCTACTGA ATAAAATATT AAAACTTAAG CCATTTCTTC ATACAGAGAA AGAAATATTC TTATTTTTAT GTCGATTTGA
AGATTTTATG GGAAGAATTG GAATCTTTAA GGACAATACC AAAAACTACA CATGCAACAC CAAATGAAAC CATGATCTTG
TAAAAGTCAT GGTTAAATAT AAAGATTCTA AATATGTCAT GCTTCTTGAA AAGTCCTGGG GAAATGTTTG TTGCTTTCAA
GACGAAAATC CTTTTAACAT TAATCATGTC TTTCCCCTGG TGCTTCAACA AATCACTACT ACAAACTCGG ATGCAAGATT
CCAACCAAAA TCAAAACAAG TCCAACTTCT CTTGGAAATG CTACAAGACT AAATGATTAA CTTTTCACAC AGCATCAATT
AGATTAAAGG GTACATTGGT GAGTCTTCCA CTCAATAACC TGGAAAAGGT AAAACCACTG AATATTCTTG GATGTTGGAT
AAAGGGGCCA CTAATATCTA TAAAAT

>Vigan.04G237200.01
ATGGTTTTGG TGTGGTCAAG AAAAGGGACA AAGAACATGG ACTTAACTCT CTTTTCACTT CTATTCTTGT TACTATTGCC
TGCACTCTCT TCTTCCATAT ATGTTGGGAA CAATATCTTG TTCAATCATC GCAAGATATT CCCCAAACAA CAAGAACTTA
CTTCGTACGC TGTGATCTTT GATGCCGGTA GCACTGGTAG CCGTGTCCAT GTCTTTCATT TCGACCAGAA CTTAGATCTT
CTTCACATAG GCAACGAGAT TGAGTTTTAT GATAAGGTGA CACCTGGTTT GAGTGCATAT GCGGATAATC CTGAAAATGC
AGCAAAATCT CTGCTTCCAC TTTTGGAGGA AGCTGAAAGT GTTGTCCCTG AGCACCTCTA CCCCACCACA CCTGTTAAAC
TTGGGGCGAC TGCAGGTCTA AGGCTTTTGG ATGGGGATGC TTCTGAAAGG ATATTGCAAG CGGTTAGCGA TTTGCTCAAG
AACAGAAGTA CCTTCAGCGT TCAACCAGAT GCTGTAGCTA TAATTGATGG AACCCAAGAA GGTTCTTATC TATGGGTGAC
AGTAAACTAT TTACTAGGGA ATTTGGGGAA GAATTTTTCA AAGACAGTGG GAGTAGTTGA TCTTGGAGGT GGATCGGTTC
AAATGACATA TGCTGTCTCA AAGAACACAG CAAACAATGC TCCACAACCA CCAGAAGGAG AGGAACCTTA CATAAAGAAA
CTTGTCCTCA AGGGAAAGAA ATATGACCTC TATGTTCACA GTTACTTGCG CTATGGTAGA GAGGCATTTC GTGCTGAGGT
TTTGAAGGTC ACTGATGGTT CTGCTAACCC TTGTATTTTA TATGGCTTTG ATGGGACCTA CACATATTCT GGAGAAGACT
ATAAGGCCTT TGCTCCCATT TCTGGATCCA ACTACCATGA ATGCAGAAAG ATAGCTCTTC AAGCTCTGAA AGTGAACCAG
TTTTGCCCCC ACCGAAATTG TAGTTTTGGA GGGATATGGG ATGGTGGAAA GGGAAGTGGA CAAAACATTC TTTTCGGCAC
TTCATCTTTC TATTATCTGC CTTCGGAGAT TGGTATGTTT AATCCAAATA AACCCAACTC CAAGATTCAT CCTTTGGATT
TGAAGACTGA AGCAAAGAGA GCTTGTGAAA CAACATTTGA GGATGCCAAA TACACTTATC CACTTCTTTC AGCTGATAAA
CTTCCATATG TATGCTTGGA CCTTACATAC CAGTATGCAT TGTTTACTGA TGGATTTGGC TTAGATCCAT TGCAAGAGAT
CACAATGGCA AATCAAATTG AATATCAGGA AGCACTTGTG GAAGCAGCAT GGCCTTTAGG CACTGCCATA GAAGCCATAT
CTTCATTGCC TAAATTTGAT CCATTCATGT ATTTTATTTA A

>Vigan.04G237200.01
MVLVWSRKGT KNMDLTLFSL LFLLLLPALS SSIYVGNNIL FNHRKIFPKQ QELTSYAVIF DAGSTGSRVH VFHFDQNLDL
LHIGNEIEFY DKVTPGLSAY ADNPENAAKS LLPLLEEAES VVPEHLYPTT PVKLGATAGL RLLDGDASER ILQAVSDLLK
NRSTFSVQPD AVAIIDGTQE GSYLWVTVNY LLGNLGKNFS KTVGVVDLGG GSVQMTYAVS KNTANNAPQP PEGEEPYIKK
LVLKGKKYDL YVHSYLRYGR EAFRAEVLKV TDGSANPCIL YGFDGTYTYS GEDYKAFAPI SGSNYHECRK IALQALKVNQ
FCPHRNCSFG GIWDGGKGSG QNILFGTSSF YYLPSEIGMF NPNKPNSKIH PLDLKTEAKR ACETTFEDAK YTYPLLSADK
LPYVCLDLTY QYALFTDGFG LDPLQEITMA NQIEYQEALV EAAWPLGTAI EAISSLPKFD PFMYFI*