GBrowse Details

Vigan.04G176900.01

Basic Information:
Name: Vigan.04G176900.01
Multiple alignment
Variant Information
Position: Chr04:25442054..25445379 (- strand)
Length: 3326
Functional Information:
Description: Similar to protein. [D7MVB8, Arabidopsis lyrata subsp. lyrata]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.97,1.92,3.60,32.04,1.83,6.36,2.16,5.18
Arabidopsis thaliana homolog: AT4G13220.1
Automatic updates:
Name: NM_001251803 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527102 (LOC100527102), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:25442054..25442345 (- strand)
Length: 292
Type: three_prime_UTR
Position: Chr04:25442346..25442483 (- strand)
Length: 138
Type: CDS
Position: Chr04:25443662..25443766 (- strand)
Length: 105
Type: CDS
Position: Chr04:25443889..25443950 (- strand)
Length: 62
Type: CDS
Position: Chr04:25444910..25445138 (- strand)
Length: 229
Type: CDS
Position: Chr04:25445139..25445379 (- strand)
Length: 241
Type: five_prime_UTR

>Vigan.04G176900.01 class=Sequence position=Chr04:25442054..25445379 (- strand)
ATGAAAAGCA GGCAAATGTT TGGGCTTCAA GACTACCTTA TGGGCCCAAC TTTGTGAGGC TGAGAACAAA GGACTACAAT
GCTACCGTAT TCTTTCTTCT ACTTCGTTGC AAAATCTCAT TTCAATTTGC ACTGACTCCT TCTTCCACAA TGTGTACCTG
AAACAAACCA CAACTTTTTT TTATTGAAAC CAATTTAAGT AATTCATTTT TTCACAGTTA ATATATTTGA GAGTGAATAA
AATGTCTGCT TCCTGTGTTG TTCGCAATTT TTGTTCTGTG ACTTCTGGTT TTCCGAATTG CCGCCAAAAC CAAACCTTGG
TTCCTACCCA TCATCAGTTT CAGTTACGCA ATCCCCTTTT GAGGTTAAAG AAGCAACCTT TCCACTCAAA CACTCATCTC
AAGAGTTCAA GAACTCAGAA GCCTCGTCCC ACTTTTGTAG TTTTCGCAGC ACAATCAAAT TTTCTTAAAG GTTGGCTCCA
TTGTTTTTTA TTGAATTATT TTGGATATGT TTAGAAAAGG TGAAGGGTGG TGATTTTTAA GTTAGGTTTA GGGGTTTTGT
TGTTAGCAGA AAGTTTCGTG GATAGAGAGA TGATTGTTGG ATGTCATGTC AGTGAAGAAT GTGTTATTAT TGAAGTTAGA
AATATTGAAA ATGAGATAAT TGTTTAGTCA AATGGCATAC TAAATGAGTT TGCTAATGCA TATGATTTTT CCCCTTCGCC
AATTTCTGGT TAAAATTTGA GTAACATCTA TCAATATAAT CTTCAGATTA TTTTGTTCGT TGCAGCTATT TTAACAACAA
ATAGGTGTTT TGGTTTAAAT TTCATCTATT ATGTTATACT CTATCTTCCA ATGTCAAGCA TATGCATAAC AATGACAAAG
TGTTATTGGG CTTAAATGAC ACCAAACTAT CAAATCTAAA TATATTGATG ATTTTGGGAT ATAGAAAGCT GGTTACCTTA
TAACAGCATT GTGGTTTCTT GAAAGGATGC ATTGCCTCCA TATGACATGC CAAATTTCCC TAAAATGGTG TAGCTCAAAA
TTCAAAACTT ATTACTGAGA TTTTTCACAT AGTTTTCCTA CATATGTGAC TAAGTGGATG ACATGATCCT TCTATGATAG
CAACTGTTAT TGATTAAACC TGGTAATTGA TTGCCCTTTT GTAATTTCAT GAGGTCTCAA CATGATGCTG GCAAATGGTC
TTAAGTTGAT GAACAACTAA TGTGTCATCT TTATTGAAAG GAAAACAGCA TTTTGTTATG AATTGTTCCA TGTCTAGAGT
ATCTTGTTAT TTTTCCCTTT TGAATGGCTA ATATTGACCT TTGGCTGGGC TGTTTTGTTT CAATTCTGGT CAATTTATTT
TGCCTACTTT CTTCTAAGAT GTCTGATCAT TTCTCTTTTG TTTCATTTGT TACTGTGATT ATGCAATAGT TCTGCAGAAT
GCATGGAAAG TTGGAAGGGA TGGAATTGAG GCAGGGACTA ATCTGGTTCC TGTAAGTCAG AATTTTCCTT CAAACATTAC
ATTACTGTTA TATATATTCA AGCCATTCTC TCAAATTTGT TAAAAATACT GATTTTTATG TTTCTCTTAT TTTCTTCTCT
ACTCTGATGC TAGAATTCTG TTCCAAGGCC AATAGCTAGG ATTTCAGTAA CAATTGTGGC TCTAAGTGTT ACACTTTTTG
TACTCAAGGC ATTCCTCTCT ACGGCTTTCT TTATATTGGT AAGTCATCTT GTTTTCCTTA TTGAATTAAA ATTGAAGATT
ATTATTTTAT TTTATAATAA AGATTCTTAG CATGAAATCA GTTTTCATGC TCATGCATGT TGGTGAAGTC ATTTTTTGCT
TACTACTGCT GCTTAAATAT TCATAAACAA ACACACTGAC ACTTCACAAT ATCAATTCCA TGGTTCAGCA TTACCAAAAT
CATGTTTTAT AGTCTAAGAA TTTTGGGTGA GGTTATCAAT TATGATGAAA GGATCACTGG CAAAACTGTA AGAGAGGATG
ATACTACTCT GAGATTTCCC TATTAAATAA TATCATATCT TCCTATGAAA TGTAATCAGA TCATAGTCTA ACCTAATTAA
ATTATCTCTC TTACAATCTC CCTCAAACTA TAGCATATGT ATAATAAGCT TGCTACAAAT GCCATCAACA CAAAAATAAA
ATAAAAAATT GAGAGAGTTA GTGATCATGA AGCCAACTGA AAAAATTAAA AAATGACAAA GCTAGAAAAT ATTTCCCAGA
CATCACTTTC CTTTTGTCAA AGTGATAATC AATCTTCAAT GTGTTATCTT TTTAAGTCAT ACCTTCAATA ATCTCCCTCA
AGTTACGGCA TAGGAGTCAA CAATTAATGA CCTATTTTGT CACTATACTT TCAACAATTC TCATCCATTA CATAGGTAGC
TAGCTATAAA TAACTATTGA AAAAAAAATG TTTAAATAGT AAGCAGCCGA ACTCGTATAG TTGCATGTGC AATTTTGTAC
AGCTATATAT GTTTCCGGAT AAAATGATAT CTATCAATTT GTGCAGCTTG CATTATTCAG CCATGCCATA CAAGTGGCAA
ATTGAGGTTT TATTTTTCTT GTCTTGTCTT CCAGAAAAAA AAATGTTGTC ATCAGTACAC CATCATTCAC CATTTTCACC
ATTTTGGTTG AGTACATGGT TCTCTTCTGA TGGTATCAAA AGTCTATATG TTATTTTGTT TATGGATAGC AGTTTTGACA
ATTAAATACA AGCCATACCA AGGTATTTGA AGCGAACATT ACAAAGAAAA AGGGATGATT GTTCCCCTTG AAATTGTCTC
TTAAGCTGAA TGTGTTTTCA CAAAATTAAA AACTCTGAAT GTATCCTAAA TTTTGGTGAT GGTTCTAAGC TTTAGATTTG
AATTACTTTT TTGTAGGCCA CTATAGGACT TTCATACTTT GCATACCTAG CATTCAATAA AGATCAAGGA CCTAGAAGGA
ACCAAGAAAC TACCTCCACT CCTATGGATG ATCCAGTGGA AGAAGCTAGA AAGATAATGG AAAAATACAA GTAGCAGCAT
CAGTTAAGGT ATTGTGAAGC TCTAAAATTC TGCATATACA TTAGTTCAGT GTAAGTATTT TTCTATTGAG TTTTAAATTT
GATGGATGGA TTGTCAACAT TTGTGAATGG CATTTTCCAT TTCTAGATCA TATTATAGTC TTTAGCACAG TCATTGCAAA
CATTTTCCAC TGCATGGATG TTAGTTTTCT TCTTTTTAGG TGAATATGAA TGTTTTTTGG TTCAAGCGTG TTTCGATTTG
CTTAAATTTT CTGGGGAAAT GTTTTTTCTT TCAATAGTTA TACGAG

>Vigan.04G176900.01
ATGAAAAGCA GGCAAATGTT TGGGCTTCAA GACTACCTTA TGGGCCCAAC TTTGTGAGGC TGAGAACAAA GGACTACAAT
GCTACCGTAT TCTTTCTTCT ACTTCGTTGC AAAATCTCAT TTCAATTTGC ACTGACTCCT TCTTCCACAA TGTGTACCTG
AAACAAACCA CAACTTTTTT TTATTGAAAC CAATTTAAGT AATTCATTTT TTCACAGTTA ATATATTTGA GAGTGAATAA
AATGTCTGCT TCCTGTGTTG TTCGCAATTT TTGTTCTGTG ACTTCTGGTT TTCCGAATTG CCGCCAAAAC CAAACCTTGG
TTCCTACCCA TCATCAGTTT CAGTTACGCA ATCCCCTTTT GAGGTTAAAG AAGCAACCTT TCCACTCAAA CACTCATCTC
AAGAGTTCAA GAACTCAGAA GCCTCGTCCC ACTTTTGTAG TTTTCGCAGC ACAATCAAAT TTTCTTAAAG TTCTGCAGAA
TGCATGGAAA GTTGGAAGGG ATGGAATTGA GGCAGGGACT AATCTGGTTC CTAATTCTGT TCCAAGGCCA ATAGCTAGGA
TTTCAGTAAC AATTGTGGCT CTAAGTGTTA CACTTTTTGT ACTCAAGGCA TTCCTCTCTA CGGCTTTCTT TATATTGGCC
ACTATAGGAC TTTCATACTT TGCATACCTA GCATTCAATA AAGATCAAGG ACCTAGAAGG AACCAAGAAA CTACCTCCAC
TCCTATGGAT GATCCAGTGG AAGAAGCTAG AAAGATAATG GAAAAATACA AGTAGCAGCA TCAGTTAAGG TATTGTGAAG
CTCTAAAATT CTGCATATAC ATTAGTTCAG TGTAAGTATT TTTCTATTGA GTTTTAAATT TGATGGATGG ATTGTCAACA
TTTGTGAATG GCATTTTCCA TTTCTAGATC ATATTATAGT CTTTAGCACA GTCATTGCAA ACATTTTCCA CTGCATGGAT
GTTAGTTTTC TTCTTTTTAG GTGAATATGA ATGTTTTTTG GTTCAAGCGT GTTTCGATTT GCTTAAATTT TCTGGGGAAA
TGTTTTTTCT TTCAATAGTT ATACGAG

>Vigan.04G176900.01
ATGTCTGCTT CCTGTGTTGT TCGCAATTTT TGTTCTGTGA CTTCTGGTTT TCCGAATTGC CGCCAAAACC AAACCTTGGT
TCCTACCCAT CATCAGTTTC AGTTACGCAA TCCCCTTTTG AGGTTAAAGA AGCAACCTTT CCACTCAAAC ACTCATCTCA
AGAGTTCAAG AACTCAGAAG CCTCGTCCCA CTTTTGTAGT TTTCGCAGCA CAATCAAATT TTCTTAAAGT TCTGCAGAAT
GCATGGAAAG TTGGAAGGGA TGGAATTGAG GCAGGGACTA ATCTGGTTCC TAATTCTGTT CCAAGGCCAA TAGCTAGGAT
TTCAGTAACA ATTGTGGCTC TAAGTGTTAC ACTTTTTGTA CTCAAGGCAT TCCTCTCTAC GGCTTTCTTT ATATTGGCCA
CTATAGGACT TTCATACTTT GCATACCTAG CATTCAATAA AGATCAAGGA CCTAGAAGGA ACCAAGAAAC TACCTCCACT
CCTATGGATG ATCCAGTGGA AGAAGCTAGA AAGATAATGG AAAAATACAA GTAG

>Vigan.04G176900.01
MSASCVVRNF CSVTSGFPNC RQNQTLVPTH HQFQLRNPLL RLKKQPFHSN THLKSSRTQK PRPTFVVFAA QSNFLKVLQN
AWKVGRDGIE AGTNLVPNSV PRPIARISVT IVALSVTLFV LKAFLSTAFF ILATIGLSYF AYLAFNKDQG PRRNQETTST
PMDDPVEEAR KIMEKYK*