GBrowse Details

Vigan.03G191700.01

Basic Information:
Name: Vigan.03G191700.01
Multiple alignment
Variant Information
Position: Chr03:29659414..29662484 (+ strand)
Length: 3071
Functional Information:
Description: Similar to protein phosphatase 2C 8-like, partial. [XP_003553817.2, Glycine max]
GO: Biological Process: protein dephosphorylation (GO:0006470)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: protein serine/threonine phosphatase activity (GO:0004722)
InterPro: Protein phosphatase 2C, manganese/magnesium aspartate binding site (IPR000222)
Protein phosphatase 2C (PP2C)-like domain (IPR001932)
Protein phosphatase 2C (IPR015655)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:32.20,5.00,8.50,3.57,0.73,10.97,1.91,7.31
Automatic updates:
Name: NM_001354947 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable protein phosphatase 2C 51 (LOC100807235), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:29659414..29659876 (+ strand)
Length: 463
Type: five_prime_UTR
Position: Chr03:29659877..29660602 (+ strand)
Length: 726
Type: CDS
Position: Chr03:29661088..29661193 (+ strand)
Length: 106
Type: CDS
Position: Chr03:29661924..29662228 (+ strand)
Length: 305
Type: CDS
Position: Chr03:29662229..29662484 (+ strand)
Length: 256
Type: three_prime_UTR

>Vigan.03G191700.01 class=Sequence position=Chr03:29659414..29662484 (+ strand)
TGTCTTGGAA CCTCGCGGAA CTGAACAAAA GCAAAATTTA CGGAAAGCAA CTTCTGTGAT GCCACGTAAA CTAACCTATG
ACTCTGACCT TTCTCTCTCT ATTCATATCA TTTCCTTTCA CCAACTGGCC CCACACTTAC CTCATCTTTC ACACATCCGT
ATCGCATCCC CCAACATCAA CGCTCCACGT ACCTGCCTTT CAATCTCAGT CGTCCACGTC TCCTTCACAA AAATCCAACT
CACTGGTCCA TAAATATCCA CCTGTTACGC CATCACACCC TCCCTTTCAA ATCGACGGTC CACACTCCAC GCCTCTCAGA
TCTCGCAATC AAACACTTTA AATTCCCTCC TTCCACGCTA CACCTCCTTT CTCTTTATTG CCGTTTTTCT TATTTCCACC
TTATTGGCTA TCCCTCTTCT GCTGTCTTCT GCTTTGTTCA GTTCGTTGCA TGCAAAAACC ACTATGAAGA AGCCAAAACA
CCACTCATCG TCGGCCAACG CTGACCGGCG AGTGGAGCCT GATTCCGGTG AGTTTGTCGC CAAGATGAAG AACGGTCGCC
AGAGACGGCT CAAAATCAAG CAAATGAAGT ACACTTGCCA GGCGAAGATC CGCATCAGGA ATGGAACCGT CGGCGTCTCG
CCGACGCCGG CGGAGGACCG GGAGGGAGGG AGCAGAGAGA TTCATGAGCG CGTGGAGATA TCTTTGTCGC TGGCGGCGGC
GTCGTCGTCC TCGGAGGAGG AGGAGCGGTC ATTGTCGGAG AAAAGCGACG GTGTTTTGTC GTACGGGTCA ACGTCTGTGA
TTGGGAGCAG GAAGGAGATG GAGGACGCGG TGAGTGCGGA GATAGGGTTT GCTGCGAAGG AGAGAGGGAA GTACGACTTC
TTCGCGGTGT ACGACGGCCA CGGCGGAGCG CAGGTGGCGG AGGCGTGTCG CAAGCGGTTG CACCGGCTGG TTGCGGAGGA
AGTGGAGAGG AGTGAGAGTC CCGTGGAATG GGACTGGCAG GGAGTGATGG AAGGGTGCTT CCGTAAAATG GACAGCGAGG
TCGCCGGTAA TGCGGCCGTC AGGACTGTGG GTTCCACGGC GGTTGTAGCT GTGATCGCGG CGGAGGAGCT TGTCGTCGCT
AATTGCGGTG ATTGTAGGGC TGTGTTGGGA AGAGGAGGTG AGGCCGTCGA CTTGTCTAGT GATCATAAGG TATAGGTGTT
ACATCTTAAA TTAATTAAAT TCTCAAATTT CTACTTTATT TTTTATTCCA CAGACAGTTC ATTTTTTAAT TTTTTTTTTG
TAAAATTTGA TTTTTGTACA TTATTATATG TTAAAAGATG GCGTAGTACC GTTTTCATTG GCAATCTAAA TATGTATTTA
CGCATATACT TAAACAAGTC AATGTTCTTC AATTTGATGG CGAAAAGTTT AGTTTGTCAA AATTGTTGCT GGCAAGTGAA
TGTCTGGAAT GCGTGTATGT GTTATGTTTA GCGTCCAGAA GAGAAAGATG TCGTTTTGTC GTATTGGAGA GTCAATTATT
TCAATTATTG TTTCGAGATT TACGATCTTC TTTGAAATGG GGTTATAACA GCTTTTGCAT TGTTAATTAA TTTTTCGTTT
CCTTTTTTCA TCACAAAGCA AAATTTATTG TAAGATAATG AATGACATTG TGGTTCCCTT CTGTGTGCAC ACAGCCCGAT
AGACCAGACG AGTTGATGCG AATAGAAGAG GCTGGTGGAA GGGTCATTAA CTGGAATGGC CAGCGCGTGC TTGGTGTTCT
TGCTACTTCA AGATCCATAG GTTAGTTTCC ACCTTTAAAT CTTTACTCAC TATAATAATA CTGGTTTTCA ACCGTTAATT
AATTAATCTC TTAGCGATGT TGCTTCGGGG TCGTGTGGTT TATCCTTGTG GTTTGTCATT TTCTTAACAC AACGTTTTTA
TCTGATCAGC ATTGAAAAGA CAGAAGAATC TTGGCTCCCT CTGGCTTTTT ATTATCAGTG TCGTGAGTAT GGCAGAGCAA
CGTTGACCAA CATGAGTATT ATTATTATTA TCGGCTTTCT CTGACCTTGA ATTAGTACCT TTAAACTCTT TAACTACTAA
GATGACACAA TGTTGCTTTG ATCCCTCCAG TAGATAGGAA TATTAAAGAA TGTAATTAAC GATGATTCTG CTATGTAAAA
CAAGTTGCCC ATAAACCAAT GATACGTTGG ACATAAATAT AACAATTATT CAAAAGCCTT AATTGCTTCT CGTATAGGGT
CAATTACATG GAACCCTTAA CTAATAAATG GAGAGGGTTT TGTGGTGTGG ATATGGTTTA CCTCAAGATT AAGGAATCTT
GATCAATCAA GTTCCATGGA ACAGTCTAAT CTCCATTTGT TAAAATATGC AAACTTGAAT CATTTATTTT GCGCATCCTT
TTTAATTGGT AAAGTTGAAT CTGTGCTTTA TGTAACAGAT CTAGAAAGGA TAAATGAAAA CCATAATATT TAACAAGAAT
GACTGTATCT GAACATTGTT TGAAATGCAG GAGATCAGTA CCTTCGACCT TATGTGATAT CAAAACCAGA AGTGACAGTG
ACGAAGCGAA GCAGCAAGGA TGAATTTGTG ATACTAGCAA GTGATGGATT GTGGGATGTT ATGTCGAGTG AAGTTGCGTG
CCAAGTTGTA AGGAAATGCC TGAATGGACA GATTAGGAGA GTGTGCAATG GAGTTGGGAA CCATGAAAAC CGTGCTGCCG
AGGCTGCAAG CCTCTTAGCT GAGATAGCAT TGGCAAAGGG AAGTAAAGAT AACACCAGTG TCATTGTAGT TGAGCTAAGA
GGAACAGTAA CATAACATCT CAGTGTCTAC AAAAACATGT ATTTTCTTCT CTAATTCTTG CCTTCTGCTT TTGGACTAAT
ATCCACTCAG GTCTTGCATC CTCAATGCCA CGAGAGATTA TCTACTACCA CATAATTACG AGTACTTACA TTAGTGTTTC
TTCTTTTAAT AATGGCCTCT TATTAATTCT TCAAATATCT AAAATGTCGC TAAAGTTTTG CAATTTTTTT TTGCCAAACT
AGCTTGGACA ATGTAAAGGA CAAACATTTG C

>Vigan.03G191700.01
TGTCTTGGAA CCTCGCGGAA CTGAACAAAA GCAAAATTTA CGGAAAGCAA CTTCTGTGAT GCCACGTAAA CTAACCTATG
ACTCTGACCT TTCTCTCTCT ATTCATATCA TTTCCTTTCA CCAACTGGCC CCACACTTAC CTCATCTTTC ACACATCCGT
ATCGCATCCC CCAACATCAA CGCTCCACGT ACCTGCCTTT CAATCTCAGT CGTCCACGTC TCCTTCACAA AAATCCAACT
CACTGGTCCA TAAATATCCA CCTGTTACGC CATCACACCC TCCCTTTCAA ATCGACGGTC CACACTCCAC GCCTCTCAGA
TCTCGCAATC AAACACTTTA AATTCCCTCC TTCCACGCTA CACCTCCTTT CTCTTTATTG CCGTTTTTCT TATTTCCACC
TTATTGGCTA TCCCTCTTCT GCTGTCTTCT GCTTTGTTCA GTTCGTTGCA TGCAAAAACC ACTATGAAGA AGCCAAAACA
CCACTCATCG TCGGCCAACG CTGACCGGCG AGTGGAGCCT GATTCCGGTG AGTTTGTCGC CAAGATGAAG AACGGTCGCC
AGAGACGGCT CAAAATCAAG CAAATGAAGT ACACTTGCCA GGCGAAGATC CGCATCAGGA ATGGAACCGT CGGCGTCTCG
CCGACGCCGG CGGAGGACCG GGAGGGAGGG AGCAGAGAGA TTCATGAGCG CGTGGAGATA TCTTTGTCGC TGGCGGCGGC
GTCGTCGTCC TCGGAGGAGG AGGAGCGGTC ATTGTCGGAG AAAAGCGACG GTGTTTTGTC GTACGGGTCA ACGTCTGTGA
TTGGGAGCAG GAAGGAGATG GAGGACGCGG TGAGTGCGGA GATAGGGTTT GCTGCGAAGG AGAGAGGGAA GTACGACTTC
TTCGCGGTGT ACGACGGCCA CGGCGGAGCG CAGGTGGCGG AGGCGTGTCG CAAGCGGTTG CACCGGCTGG TTGCGGAGGA
AGTGGAGAGG AGTGAGAGTC CCGTGGAATG GGACTGGCAG GGAGTGATGG AAGGGTGCTT CCGTAAAATG GACAGCGAGG
TCGCCGGTAA TGCGGCCGTC AGGACTGTGG GTTCCACGGC GGTTGTAGCT GTGATCGCGG CGGAGGAGCT TGTCGTCGCT
AATTGCGGTG ATTGTAGGGC TGTGTTGGGA AGAGGAGGTG AGGCCGTCGA CTTGTCTAGT GATCATAAGC CCGATAGACC
AGACGAGTTG ATGCGAATAG AAGAGGCTGG TGGAAGGGTC ATTAACTGGA ATGGCCAGCG CGTGCTTGGT GTTCTTGCTA
CTTCAAGATC CATAGGAGAT CAGTACCTTC GACCTTATGT GATATCAAAA CCAGAAGTGA CAGTGACGAA GCGAAGCAGC
AAGGATGAAT TTGTGATACT AGCAAGTGAT GGATTGTGGG ATGTTATGTC GAGTGAAGTT GCGTGCCAAG TTGTAAGGAA
ATGCCTGAAT GGACAGATTA GGAGAGTGTG CAATGGAGTT GGGAACCATG AAAACCGTGC TGCCGAGGCT GCAAGCCTCT
TAGCTGAGAT AGCATTGGCA AAGGGAAGTA AAGATAACAC CAGTGTCATT GTAGTTGAGC TAAGAGGAAC AGTAACATAA
CATCTCAGTG TCTACAAAAA CATGTATTTT CTTCTCTAAT TCTTGCCTTC TGCTTTTGGA CTAATATCCA CTCAGGTCTT
GCATCCTCAA TGCCACGAGA GATTATCTAC TACCACATAA TTACGAGTAC TTACATTAGT GTTTCTTCTT TTAATAATGG
CCTCTTATTA ATTCTTCAAA TATCTAAAAT GTCGCTAAAG TTTTGCAATT TTTTTTTGCC AAACTAGCTT GGACAATGTA
AAGGACAAAC ATTTGC

>Vigan.03G191700.01
ATGAAGAAGC CAAAACACCA CTCATCGTCG GCCAACGCTG ACCGGCGAGT GGAGCCTGAT TCCGGTGAGT TTGTCGCCAA
GATGAAGAAC GGTCGCCAGA GACGGCTCAA AATCAAGCAA ATGAAGTACA CTTGCCAGGC GAAGATCCGC ATCAGGAATG
GAACCGTCGG CGTCTCGCCG ACGCCGGCGG AGGACCGGGA GGGAGGGAGC AGAGAGATTC ATGAGCGCGT GGAGATATCT
TTGTCGCTGG CGGCGGCGTC GTCGTCCTCG GAGGAGGAGG AGCGGTCATT GTCGGAGAAA AGCGACGGTG TTTTGTCGTA
CGGGTCAACG TCTGTGATTG GGAGCAGGAA GGAGATGGAG GACGCGGTGA GTGCGGAGAT AGGGTTTGCT GCGAAGGAGA
GAGGGAAGTA CGACTTCTTC GCGGTGTACG ACGGCCACGG CGGAGCGCAG GTGGCGGAGG CGTGTCGCAA GCGGTTGCAC
CGGCTGGTTG CGGAGGAAGT GGAGAGGAGT GAGAGTCCCG TGGAATGGGA CTGGCAGGGA GTGATGGAAG GGTGCTTCCG
TAAAATGGAC AGCGAGGTCG CCGGTAATGC GGCCGTCAGG ACTGTGGGTT CCACGGCGGT TGTAGCTGTG ATCGCGGCGG
AGGAGCTTGT CGTCGCTAAT TGCGGTGATT GTAGGGCTGT GTTGGGAAGA GGAGGTGAGG CCGTCGACTT GTCTAGTGAT
CATAAGCCCG ATAGACCAGA CGAGTTGATG CGAATAGAAG AGGCTGGTGG AAGGGTCATT AACTGGAATG GCCAGCGCGT
GCTTGGTGTT CTTGCTACTT CAAGATCCAT AGGAGATCAG TACCTTCGAC CTTATGTGAT ATCAAAACCA GAAGTGACAG
TGACGAAGCG AAGCAGCAAG GATGAATTTG TGATACTAGC AAGTGATGGA TTGTGGGATG TTATGTCGAG TGAAGTTGCG
TGCCAAGTTG TAAGGAAATG CCTGAATGGA CAGATTAGGA GAGTGTGCAA TGGAGTTGGG AACCATGAAA ACCGTGCTGC
CGAGGCTGCA AGCCTCTTAG CTGAGATAGC ATTGGCAAAG GGAAGTAAAG ATAACACCAG TGTCATTGTA GTTGAGCTAA
GAGGAACAGT AACATAA

>Vigan.03G191700.01
MKKPKHHSSS ANADRRVEPD SGEFVAKMKN GRQRRLKIKQ MKYTCQAKIR IRNGTVGVSP TPAEDREGGS REIHERVEIS
LSLAAASSSS EEEERSLSEK SDGVLSYGST SVIGSRKEME DAVSAEIGFA AKERGKYDFF AVYDGHGGAQ VAEACRKRLH
RLVAEEVERS ESPVEWDWQG VMEGCFRKMD SEVAGNAAVR TVGSTAVVAV IAAEELVVAN CGDCRAVLGR GGEAVDLSSD
HKPDRPDELM RIEEAGGRVI NWNGQRVLGV LATSRSIGDQ YLRPYVISKP EVTVTKRSSK DEFVILASDG LWDVMSSEVA
CQVVRKCLNG QIRRVCNGVG NHENRAAEAA SLLAEIALAK GSKDNTSVIV VELRGTVT*