GBrowse Details

Vigan.02G287500.01

Basic Information:
Name: Vigan.02G287500.01
Multiple alignment
Variant Information
Position: Chr02:39886209..39890756 (- strand)
Length: 4548
Functional Information:
Description: Similar to Uncharacterized protein. [K7LCL1, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Cellular Component: endoplasmic reticulum (GO:0005783)
Molecular Function: protein disulfide isomerase activity (GO:0003756)
Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671)
InterPro: Endoplasmic reticulum oxidoreductin 1 (IPR007266)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:22.34,22.69,9.92,8.18,66.32,24.26,24.66,10.92
Arabidopsis thaliana homolog: AT1G72280.1, AT2G38960.3
Automatic updates:
Name: AB622258 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max Gm ero1b mRNA for ER oxidoreductin 1b, complete cds.
PubMed ID: 26645455 NCBI(pubmed)
Status: Known Variant
Name: NM_001317680 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max endoplasmic reticulum oxidoreductin-1 (LOC100783071), mRNA.
PubMed ID: 26645455 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:39886209..39886710 (- strand)
Length: 502
Type: three_prime_UTR
Position: Chr02:39886711..39886893 (- strand)
Length: 183
Type: CDS
Position: Chr02:39886991..39887114 (- strand)
Length: 124
Type: CDS
Position: Chr02:39887607..39887809 (- strand)
Length: 203
Type: CDS
Position: Chr02:39887949..39888053 (- strand)
Length: 105
Type: CDS
Position: Chr02:39888269..39888387 (- strand)
Length: 119
Type: CDS
Position: Chr02:39888720..39888830 (- strand)
Length: 111
Type: CDS
Position: Chr02:39889263..39889515 (- strand)
Length: 253
Type: CDS
Position: Chr02:39889990..39890121 (- strand)
Length: 132
Type: CDS
Position: Chr02:39890290..39890448 (- strand)
Length: 159
Type: CDS
Position: Chr02:39890449..39890756 (- strand)
Length: 308
Type: five_prime_UTR

>Vigan.02G287500.01 class=Sequence position=Chr02:39886209..39890756 (- strand)
GAAAAAAATA ATGAAATGGA CTCCTATTGG TTGAAACACG TAACCACACG CAGCCACCAC GGTGTCCGAA TTTGACACTG
GAATTTTCTT ACGAACACTG TTTTGCACAA ACCAAAAATC GAAACCAACA ACCGCCCATT TATTTAACTC CGACGACCTT
GACTGCTGCA AACAGCAAAA ACTGCCCTCA ACTTAGTACC TTGTAGAACG CTTCCATTTC CCCTTCGAAA TTCACGACAC
TGGGATCCGT CGAAGAACGC CAAAAATCTC GGTGCTTTGT TTCGGAAGCA CCGGCATTGG AAACTGTGAT GGTGGAAACG
GAGCCTAAGA AGAAGGGTTG GGGAGTGCCA TGGCTTTGGG TTCTGATGTC TCTCGTGGCT GTGTTTGTTG CTATGGCTGT
GTCGTCTAAA ACTTCTACCA GAATTTCTCT GTCTGGAGCC ATTGATAGAG CTTGTCAGTG TGCCCGGGTA ATTTCTATGA
ACTCTTCTTG ATGAAAACCC ACATTTTAAG TTTCTTTTTT TATTTTAGGG TTGTGGGATT CTGAATCTTG GACAAAGAGT
GTGTCTTTTT ATGATTTGTG TTTATGTTTC CCCCCCTTTA TATTGTTTGT GCAATTCTCT CTTTGTTGGT TGCAGGGTGC
ACCGAAGTTC AGTGGCATGG TAGAGGACTG TTGTTGTGAT TACGAAACTG TGGACCATCT CAATGAGGAA GTGTTGAACC
CTTCCCTCCA AGAACTCGTG AAGACCCCTT TCTTTCGATA TTTTAAGGTT TTCTTCTTGG TGCATCTTAT TTTATGCCTA
CATTTTTCCT TTTGACTAAG ATCATCTTGT TTTTTGTTGA TACTTATGGT TACCTTAAGT TTGATTAGAG CCTGATAAAC
TATTAGGTTT TTATTAGGCC CTTCTTGTAT GTGTGTTTTT GTGTTCCAAT TTTATATTGG TTTCTACTCT ATCCCTTGTA
TTACTTGTAA AGATTCCTGG CATCCTGTTC ACACCAGAAG CGCAATTTAG GATTGAGAGG CCTATCTAAA AGAACTTGGT
TGGTTCCAAA ATTGTGTTCT ATTGGTGATT TTTTGAGGTT CTCTTGATCC ATGAAATATT TGAATTTGGA ATTGATCAAC
AGTATGAGAA ATTAGAGAAA ACCACTTATT TTGTTGGAAT GAATCAATGC TTTAGAATCA ATCAAGTCTA TGCATGCTCA
TTTGCATTGT CAACTGAATT TAGTGGGTGA AATTTTTATA GGTGAAATTA TGGTGTGACT GTCCTTTCTG GCCCGATGAC
GGCATGTGCC GGTTGCGGGA CTGTAGTGTA TGTGAATGTC CAGAAAGTGA ATTCCCTGAA TCATTTAAGA AGCCACATGC
CTTCTCAATG AATGATCTTG TTTGTCAAGA AGGTAAACCT CAGGCAGCTG TTGACCGTAC TTTAGACAGT AAAGTTTTCA
GAGGATGGAC AGAAATAGAC AATCCATGGA CAAATGATGA TGAGACAGAC AACGGTGCGT TATTACTCTA TATTCTAATT
GATATCTAAA TTATTTGTGC TATCAGTTGT TGTTTATCCA AATTAATTGT GTGAAAGTGA AATAGCAGAT ATTAGCAGTG
AAGTATAAAA TTTAGGATTC TTAAGTATAT TGAGTGACAT CAGATTTATA CTCCTCTAAT GAGTATATCT TTGTGAATCG
TTTTGTTTGA TATCTTGATC TGAAAGATAT TTCTTTCTAT GATTAAATTT GAACTTGATC AGCCCTTGGT TTTCAGTATC
AGAAAGCAAA CAGTGTAGTT AGCATTCACT TCTAGTAAAA GTGCCTTTTA ACTTTTTTTT AACAGGTGGC AACACGTTAT
TCAAATTATT AAATCTTTTT ATGATGTTTT TAACATTTTT CTATGAAAAA TAAGTGTGTC AATTGAAGCT GCGTTTGCAT
TTGCAGACGA GATGACATAC GTGAATCTTC AACTGAATCC TGAAAGGTAT ACTGGTTACT CTGGTGCTTC TGCAAGAAGG
ATATGGGATG CTGTCTACTC TGAGAACTGC CCCAAATGTG AGTTTTCTCT GAAAAGCTTA TTCACTTAAA TAATTCGACC
AAACTATAAT ATTTTGAAAA GGCCTTGGAT TTTAGGTTGT TTGATGGTAC CTTTCATATT GTCAAAAATT GACAGTCCAG
TAACTTTGAA TGTAAATCCA GTAATTTTTC TATCTGTATG CATTATTTGT TTAATTATAC ATTGTCTTGC TTTCCGTAGA
ATGGATATTG GTTGTGTTCT TATCATTTGT TTTAGTGAAA GATATCTTTG AAATGTTAAT AACAGGGGAG TTTCTTTTCT
CTGGTTTCTA TGGTTCATTA TTTTGAAAAA ACAAAAATGT CTTCTGCAGA TCCGTCTCAA GAGTTATGCC AAGAGGAAAA
GATTTTGTAT AAATTGATAT CCGGTCTTCA CTCCTCCATA TCAGTACATA TAGCTGCTGA GTATCTACTT GATGAAACTT
CAAATTTGGT AAATCTCACG TTCCTCTTTC TAGCAATAGC TATTGCATAT TTGAGCCTCG AAGTTATGGG CCGTTCTATA
CTCTAAAGTA ATTTGGATGT AGCTCATTTT AAAGCTTCCT GCATTTTTAT TTTTGTGGCA TACCCATGTT ATTCTAATAT
ATTTCACTGA ACATAAGAAA AATATATTTC AATATCTAAC TTCTTTCTTT TTTATTATTC CAGTGGGGCC AAAATCTTAC
TTTGGTGTAT GATCGAGTCC TAAAATACCC TGATCGTGTC AGCAATTTGT ATTTCACTTT TCTCTTTGTG CTGCGAGCAG
TGACCAAGGT GAGTATAAAA TGTGATGGTT TAACGTCACA AACTGTGCAT CTATATATGG ATTAATCTTG CTATTTTATT
CTTCTTTTAA AAATACTAGT TAATTATATT CTTGATGCAA TCTACGTTGC TCTTTATTCT TCTTTAGGCT GCAGATTATC
TGGAACAGGC AGAGTATGAT ACAGGTAACC ATTATGAGGA CCTTAAGACA CAGTCCTTGA TAAAACAGGT ACTTCATAAC
CCCAAGCTTC AAGCTGCTTG TCCGATTCCA TTTGATGAAG CTAATTTGTG GAGAGGCCAA AGTGGACCTG AGCTAAAACT
GCAAATTCAA CAACAATTTA GAAACATCAG GTATTACTGA AAACTAGTGG ACTTGGTTTG GGCTAGCTAA ATATTATCCA
TTTATAATTT ATATGCTTGT TGTGACTTAG TCTGTTGTAG GCAGGCTTCA TACTAATAAC AAATATGTAG AAAAGACAAT
TGATTAGTAA TGATTCATAT TAATGCTCAC AAAAGAATAT TTGTGGAAGG AATCAAAGTG TGTAGGTTGG ATTTTTCCCA
AAAAATCCTG TAATTGATAA GTATGATTTT CCTTTTTCAT CTTCATGCTT TGGAATTTTA GTCTTTTGAG TTTCCACATA
CTGATGGATG TTAAGTGGGT TTATCTGGAC TTTTTGAGTG CTGATCGCAT CTGAACATAA CTTTTGATTG TATAAGACAA
CCAAGTGACC AATCCTTTTA CTTGTTCTCC GTTTTATTAT TCTACTACTG ATTCATTTTA CGCTCTTTTT TTATTTATTT
TATCTCACTG GCAATTGAAT AATATATTTT TTGTGGAAAC AGTGCATTGA TGGATTGTAT AGGATGTGAG AAGTGTCGAT
TATGGGGTAA GCTTCAGGTT CTTGGTCTTG GAACTGCATT AAAGATTCTC TTCTCTGTTG ATGGTCAAGA AAACTCAAGT
CAAACAGTAA GTACATTTTA CCTCAGAATT TATTTTTTCT TCCTCCCTTC ACACTATTGT TAATTGACCA ACACCTTATA
AATTGCACTT GACGATCTTT CAGCTGCAGC TGCAAAGGAA TGAGGTAATT GCATTGATGA ACCTTCTGAA TCGGCTTTCA
GAATCTGTCA AATTTGTCCG TGAAGTGGGA CCTGCAGCTG ATAGTGTGAT GGAAGGACAT GTTTCTGCTC ATAAAACACT
GATTAACGCA TGGAAAAAAA TTTGGTCCTT TGTATCTAAA ACTTAGGTAA GATGCTCTCT TCTCAGTATT TGTTGTATCA
GTCTATGATG TACCAAACTG AGTATTAGAT GTTTTTGCAT CTGCAGGCTG GGTGAGTGGT GACAGTTCTG TTTTCTGTGA
TTCAAATTAC TTCATAGGTT ATACATAGAA AACCACTGTC ATAGTTGGGA AACTAATGTA CTTAGAGTGT CTCAAAATGG
AAAATAAATT GGTTAGAGTA TAGGGGGAAA GATTAAGTGA AAGTAATAGA AAATATATTA CTTGGGAATT TGGGGTTTAA
TCCCCTTCCC CACTGATTTT GTAGTTCAAT ATTTCTTGCA ATATCTGTGC AACATTTCTC CTTGTGTCTT GAGGAAAGGA
AACAAAGAAA CAATCACACA CCTCCACACT TTTTGGAGTT GTAGAGAAAG AGTATTGACA AAAACAGTGA ACATGATGTT
TGTTTCCTTC GACATGATAG GTTGGTTATC AACTGAGTGA ATCATAAATA AGTATTGGTA AAAAATTG

>Vigan.02G287500.01
GAAAAAAATA ATGAAATGGA CTCCTATTGG TTGAAACACG TAACCACACG CAGCCACCAC GGTGTCCGAA TTTGACACTG
GAATTTTCTT ACGAACACTG TTTTGCACAA ACCAAAAATC GAAACCAACA ACCGCCCATT TATTTAACTC CGACGACCTT
GACTGCTGCA AACAGCAAAA ACTGCCCTCA ACTTAGTACC TTGTAGAACG CTTCCATTTC CCCTTCGAAA TTCACGACAC
TGGGATCCGT CGAAGAACGC CAAAAATCTC GGTGCTTTGT TTCGGAAGCA CCGGCATTGG AAACTGTGAT GGTGGAAACG
GAGCCTAAGA AGAAGGGTTG GGGAGTGCCA TGGCTTTGGG TTCTGATGTC TCTCGTGGCT GTGTTTGTTG CTATGGCTGT
GTCGTCTAAA ACTTCTACCA GAATTTCTCT GTCTGGAGCC ATTGATAGAG CTTGTCAGTG TGCCCGGGGT GCACCGAAGT
TCAGTGGCAT GGTAGAGGAC TGTTGTTGTG ATTACGAAAC TGTGGACCAT CTCAATGAGG AAGTGTTGAA CCCTTCCCTC
CAAGAACTCG TGAAGACCCC TTTCTTTCGA TATTTTAAGG TGAAATTATG GTGTGACTGT CCTTTCTGGC CCGATGACGG
CATGTGCCGG TTGCGGGACT GTAGTGTATG TGAATGTCCA GAAAGTGAAT TCCCTGAATC ATTTAAGAAG CCACATGCCT
TCTCAATGAA TGATCTTGTT TGTCAAGAAG GTAAACCTCA GGCAGCTGTT GACCGTACTT TAGACAGTAA AGTTTTCAGA
GGATGGACAG AAATAGACAA TCCATGGACA AATGATGATG AGACAGACAA CGACGAGATG ACATACGTGA ATCTTCAACT
GAATCCTGAA AGGTATACTG GTTACTCTGG TGCTTCTGCA AGAAGGATAT GGGATGCTGT CTACTCTGAG AACTGCCCCA
AATATCCGTC TCAAGAGTTA TGCCAAGAGG AAAAGATTTT GTATAAATTG ATATCCGGTC TTCACTCCTC CATATCAGTA
CATATAGCTG CTGAGTATCT ACTTGATGAA ACTTCAAATT TGTGGGGCCA AAATCTTACT TTGGTGTATG ATCGAGTCCT
AAAATACCCT GATCGTGTCA GCAATTTGTA TTTCACTTTT CTCTTTGTGC TGCGAGCAGT GACCAAGGCT GCAGATTATC
TGGAACAGGC AGAGTATGAT ACAGGTAACC ATTATGAGGA CCTTAAGACA CAGTCCTTGA TAAAACAGGT ACTTCATAAC
CCCAAGCTTC AAGCTGCTTG TCCGATTCCA TTTGATGAAG CTAATTTGTG GAGAGGCCAA AGTGGACCTG AGCTAAAACT
GCAAATTCAA CAACAATTTA GAAACATCAG TGCATTGATG GATTGTATAG GATGTGAGAA GTGTCGATTA TGGGGTAAGC
TTCAGGTTCT TGGTCTTGGA ACTGCATTAA AGATTCTCTT CTCTGTTGAT GGTCAAGAAA ACTCAAGTCA AACACTGCAG
CTGCAAAGGA ATGAGGTAAT TGCATTGATG AACCTTCTGA ATCGGCTTTC AGAATCTGTC AAATTTGTCC GTGAAGTGGG
ACCTGCAGCT GATAGTGTGA TGGAAGGACA TGTTTCTGCT CATAAAACAC TGATTAACGC ATGGAAAAAA ATTTGGTCCT
TTGTATCTAA AACTTAGGTA AGATGCTCTC TTCTCAGTAT TTGTTGTATC AGTCTATGAT GTACCAAACT GAGTATTAGA
TGTTTTTGCA TCTGCAGGCT GGGTGAGTGG TGACAGTTCT GTTTTCTGTG ATTCAAATTA CTTCATAGGT TATACATAGA
AAACCACTGT CATAGTTGGG AAACTAATGT ACTTAGAGTG TCTCAAAATG GAAAATAAAT TGGTTAGAGT ATAGGGGGAA
AGATTAAGTG AAAGTAATAG AAAATATATT ACTTGGGAAT TTGGGGTTTA ATCCCCTTCC CCACTGATTT TGTAGTTCAA
TATTTCTTGC AATATCTGTG CAACATTTCT CCTTGTGTCT TGAGGAAAGG AAACAAAGAA ACAATCACAC ACCTCCACAC
TTTTTGGAGT TGTAGAGAAA GAGTATTGAC AAAAACAGTG AACATGATGT TTGTTTCCTT CGACATGATA GGTTGGTTAT
CAACTGAGTG AATCATAAAT AAGTATTGGT AAAAAATTG

>Vigan.02G287500.01
ATGGTGGAAA CGGAGCCTAA GAAGAAGGGT TGGGGAGTGC CATGGCTTTG GGTTCTGATG TCTCTCGTGG CTGTGTTTGT
TGCTATGGCT GTGTCGTCTA AAACTTCTAC CAGAATTTCT CTGTCTGGAG CCATTGATAG AGCTTGTCAG TGTGCCCGGG
GTGCACCGAA GTTCAGTGGC ATGGTAGAGG ACTGTTGTTG TGATTACGAA ACTGTGGACC ATCTCAATGA GGAAGTGTTG
AACCCTTCCC TCCAAGAACT CGTGAAGACC CCTTTCTTTC GATATTTTAA GGTGAAATTA TGGTGTGACT GTCCTTTCTG
GCCCGATGAC GGCATGTGCC GGTTGCGGGA CTGTAGTGTA TGTGAATGTC CAGAAAGTGA ATTCCCTGAA TCATTTAAGA
AGCCACATGC CTTCTCAATG AATGATCTTG TTTGTCAAGA AGGTAAACCT CAGGCAGCTG TTGACCGTAC TTTAGACAGT
AAAGTTTTCA GAGGATGGAC AGAAATAGAC AATCCATGGA CAAATGATGA TGAGACAGAC AACGACGAGA TGACATACGT
GAATCTTCAA CTGAATCCTG AAAGGTATAC TGGTTACTCT GGTGCTTCTG CAAGAAGGAT ATGGGATGCT GTCTACTCTG
AGAACTGCCC CAAATATCCG TCTCAAGAGT TATGCCAAGA GGAAAAGATT TTGTATAAAT TGATATCCGG TCTTCACTCC
TCCATATCAG TACATATAGC TGCTGAGTAT CTACTTGATG AAACTTCAAA TTTGTGGGGC CAAAATCTTA CTTTGGTGTA
TGATCGAGTC CTAAAATACC CTGATCGTGT CAGCAATTTG TATTTCACTT TTCTCTTTGT GCTGCGAGCA GTGACCAAGG
CTGCAGATTA TCTGGAACAG GCAGAGTATG ATACAGGTAA CCATTATGAG GACCTTAAGA CACAGTCCTT GATAAAACAG
GTACTTCATA ACCCCAAGCT TCAAGCTGCT TGTCCGATTC CATTTGATGA AGCTAATTTG TGGAGAGGCC AAAGTGGACC
TGAGCTAAAA CTGCAAATTC AACAACAATT TAGAAACATC AGTGCATTGA TGGATTGTAT AGGATGTGAG AAGTGTCGAT
TATGGGGTAA GCTTCAGGTT CTTGGTCTTG GAACTGCATT AAAGATTCTC TTCTCTGTTG ATGGTCAAGA AAACTCAAGT
CAAACACTGC AGCTGCAAAG GAATGAGGTA ATTGCATTGA TGAACCTTCT GAATCGGCTT TCAGAATCTG TCAAATTTGT
CCGTGAAGTG GGACCTGCAG CTGATAGTGT GATGGAAGGA CATGTTTCTG CTCATAAAAC ACTGATTAAC GCATGGAAAA
AAATTTGGTC CTTTGTATCT AAAACTTAG

>Vigan.02G287500.01
MVETEPKKKG WGVPWLWVLM SLVAVFVAMA VSSKTSTRIS LSGAIDRACQ CARGAPKFSG MVEDCCCDYE TVDHLNEEVL
NPSLQELVKT PFFRYFKVKL WCDCPFWPDD GMCRLRDCSV CECPESEFPE SFKKPHAFSM NDLVCQEGKP QAAVDRTLDS
KVFRGWTEID NPWTNDDETD NDEMTYVNLQ LNPERYTGYS GASARRIWDA VYSENCPKYP SQELCQEEKI LYKLISGLHS
SISVHIAAEY LLDETSNLWG QNLTLVYDRV LKYPDRVSNL YFTFLFVLRA VTKAADYLEQ AEYDTGNHYE DLKTQSLIKQ
VLHNPKLQAA CPIPFDEANL WRGQSGPELK LQIQQQFRNI SALMDCIGCE KCRLWGKLQV LGLGTALKIL FSVDGQENSS
QTLQLQRNEV IALMNLLNRL SESVKFVREV GPAADSVMEG HVSAHKTLIN AWKKIWSFVS KT*