GBrowse Details

Vigan.02G260600.01

Basic Information:
Name: Vigan.02G260600.01
Multiple alignment
Variant Information
Position: Chr02:36599350..36605445 (- strand)
Length: 6096
Functional Information:
Description: Similar to ATP synthase subunit gamma. [I1KD11, Glycine max]
GO: Biological Process: ATP synthesis coupled proton transport (GO:0015986)
Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261)
Molecular Function: proton-transporting ATP synthase activity, rotational mechanism (GO:0046933)
Molecular Function: proton-transporting ATPase activity, rotational mechanism (GO:0046961)
InterPro: ATPase, F1 complex, gamma subunit (IPR000131)
ATPase, F1 complex, gamma subunit domain (IPR023633)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:86.14,53.89,104.22,52.05,156.15,115.23,111.71,56.66
Arabidopsis thaliana homolog: AT2G33040.1
Automatic updates:
Name: NM_001414683 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max ATP synthase subunit gamma, mitochondrial-like (LOC100790402), mRNA; nuclear gene for mitochondrial product.
PubMed ID: 18927222 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:36599350..36600000 (- strand)
Length: 651
Type: three_prime_UTR
Position: Chr02:36600001..36600201 (- strand)
Length: 201
Type: CDS
Position: Chr02:36601180..36601299 (- strand)
Length: 120
Type: CDS
Position: Chr02:36601477..36601599 (- strand)
Length: 123
Type: CDS
Position: Chr02:36602921..36603048 (- strand)
Length: 128
Type: CDS
Position: Chr02:36604184..36604297 (- strand)
Length: 114
Type: CDS
Position: Chr02:36604699..36604851 (- strand)
Length: 153
Type: CDS
Position: Chr02:36604999..36605042 (- strand)
Length: 44
Type: CDS
Position: Chr02:36605167..36605249 (- strand)
Length: 83
Type: CDS
Position: Chr02:36605250..36605445 (- strand)
Length: 196
Type: five_prime_UTR

>Vigan.02G260600.01 class=Sequence position=Chr02:36599350..36605445 (- strand)
TTTTCCTAGT AAAGCAGTAA CAAACCTACG GGGAATAGAA ATGTGCGTGG GGCATGTGAT ACATAACGCA GCATCCATAC
ATATGAGACC ATATTGAACA GTGTTGGCAT TGTTCCTGAA CGAAAACAAA TAGGGGCTTC TTCAGTTGTC TGTGTGTAAC
ACCGCTAGGG TTTCGCAAGA GCGATCACAA ACGAAGATGG CAATGGCTGC TGTTCTGCGT CGCGAAGGGA GGCGTTTGAC
CCAACCAATC AACGCTCTCC ATTCCTCTCT CATCTCTCAG TCAGTTCTTC CCTTTCTCTT ACAATTCCTC AAATCTCAAT
TCCACTCTCT TGTTTCCCCT CTTGCACAGA TCTCGAATTT GTATTATCGA TCTTACACGC TAATTAGAAC GTGTTTTTCA
CAGAGACCAA GCTCCTCATG GTTCGCGCTC CGTTTCCACC CAAGTAGGTA CGATCGGTTT TCTTCTCCCT TTCGCCGTTT
CTTAATTTGG TCTTGGAATA AGCTTTTTAT TTTGTGTGTG TATGTGTTTG ATTGTGTCCT TGTGTTGGAC TTGAACGAGT
GTTGATTTGT AATGGTTTAA TGAAATTGAC GCAGTGAGGA ACCGAATGAA GAGTGTGAAG AATATCCAGA AAATCACCAA
GGCCATGAAG ATGGTTGCCG CATCCAAGCT TCGAGCCGTT CAAACAAGAG CTGAAAATTC CCGTGGCCTC TGGCAACCAT
TCACTGCCCT TCTCGGTGAC AATCCAAGTA TGTTCTCTTA TCATTATTGT TATTATTTGT TATTGTTGTT GTACCCTATA
TCGTGATCTA AAATGCGTAT GAATTTTGTA TTAGATTTTT ATTATGAATC GTCTAGATTT GCTATTATCA GTAGAGAACT
GTTACTTGTA CGACAACGGA GTGAGGGAGA AAAAAAGAAG AGAATTTGAA TTGTAACGAA TGACGTGATA GAAAGAAATT
TACGCAAAAG TTGATGTTGT GCAAATTATT GTATTGTATG GCATTTCTTG TTATTATTAT TATTAACGTG ATCTTTGTTA
GGAATTTGCG ATCTTGAACA TGTGCAATTG CTTCATTAGA TTTGTGTTTG TTAATTTTAT TTTTCTGATG ATGCCCTGAT
CTTCGTTTGG TTTTTGTTTT TTTTTAAGGT GCTGATGTTA AGAAGAATGT TGTTGTTACC GTTTCCTCGG ACAAAGGTCT
TTGTGGTGGA ATCAATTCCA CATCTGTCAA GATAAGCAGG GTTTTGCACA AATTGAATTC CGGTAATTTT TGCAGCTGTG
TCTGGTACAG ACTTCTTATA CTGTGTTGTT TTTAAAACAT TAAAAGTGAA ATGGTTGGAA ATGTAAGTTT GTAATGTTGG
CTGGTTTTAA ACCACTCAAT GTTTTGGATC CTTTTAACCA ACTGACGGGC TTATGTTATT TTCAATGTAC AGAACCTTTT
TGCTATGTAA TATACTTTAG TAGGAATGTC AACGAGTCCT AATGATGTAG TCCCTAGATT TTTATACAAT CAAGAAAACG
AGGAAAAAAT ATCACTATCA TGTATGCTCC TGAAATATTA TTTACCTTGA TAATTGGGTT AAAATTATTA TATTATATGA
TGTGAACGGG GGATCATTTG GTTTTAACAT GTATTATGTC CAAAATCTTA AAAAGTCATA AAGTTAATAT TAACTGTAAA
ATCAAGCCTG GGCGATCTTA CTGTTGGGTC ACATGTAGAT ATCAAGTTTT AGGTGTAAGG TTTGTTAAGA TATCTCACAT
TGGTTAGGAC TATGGCCAGA ATCCTACTTA TAAGACATGC GTATCCTTCT TTGTTGAGCT ATGTTTTGGT TCATATGGGC
CAAGTTCTTT TTTAACTTAA TATTGTACTC AATCTAGATT TAATATTAAG CCAAGTATAG AAGTCCAGTC CTACTAACTT
CATACTCTAG ATATTCGTCT ACAGTGTGAA GGGTGTGTTA TTTCTCTCAT TGGCTAGAAT ATGATGTAAT TCTCCTTATA
AGATATATGA ACAATACTTC TCCCTTCAGC TTCTTTTGGT GTTGAGCTAA GCCTGGTCCA TTTCTAATAG CACTGTTGCA
CACCATTTTT TTTTACATTC TGAGTTTTAC TAATTTTATG TATAAAAATA TTTGCTTTCT CATTTTCATG ACTTCTGTTA
TTATTTATTT ATTTTAGCTT AAGATATAAA CTTTTGCATA TTAATTATGA GTATATCTTA AATTTTGGAT ACTTCTTTTT
AGCATTTTAT ATGTAGTATA GAATATTTAA TTTGTATGTA TGATCTTTAA TAATAGAAGG CATCCCGCAA TCCACTTTCT
CACTGTTATG TTTTCAAGGT TGACCTATCT GAGATTGATA ACTATGATTT TAATTGTGTG CCTATTTACT ACAATAGGGC
CTGATAAAGA GACAAAATAT GTCATACTGG GAGAGAAGGC TAAGGCTCAA TTGTTACGTG ACTCAAAGAA AAATATCGAG
CTCTCCCTTA CTGAATTGCA GAAGAATCCT CTGAATTATA CTCAGGTTAG CTTGTTGTGT CTCTCTTCCA TCCAATGGTT
CTTAAGTTTT GCACAATTAT ATTTGTGCCT CTATATTTTT TTTTCTAGAG CCTGCTTTTG TTTTAATCTA CTCTATAGTC
TGAAAATTAA GCTTTTCTCT GAATTGATTA TACTACAGAT GGTAATAGAA CCAAAATTTT GAAGATTTTG AAAGTTTGGT
ATTTCAATAG GCAACCATTT GTGAGGATAA AAGGAATCAA ATAATGGAGA ATATTGAGGT TGAAGCAGAG AACAGTAACA
TAATATGTTA CAGATGTGAA ATTTTAGAAT GCTTTTGAAT AATAAATACT ATGTCGAATA TTTTCAATGC AATTTATTTT
CTCTGCTCAG CTGCTTAAAA ATTAAACTTT TAGAAGAAAA ACTGAAATTA TAACCTTCCT CTAAATGGTT TTAATAACAC
ATTTTCTGAT TGAGCCTAAT ATGCACGTTG GCCTTTGTAG CCAACCTGAC TCAGGTGAGC AAATCTTGTT CTTGTTGAAA
TTCAAACATA GAACATGTTT GGTTTACTAG ATTTATATAT ATATATATAT ATATATATAT ATATATATAT ATGTATGTAT
GTATGTATAT GTATGTATAT GTATATGTAT ATGTATATAT TAAGTCCATT AAGATAGAGC ATCGCTAGGT CAATGACTGC
ATGTGTGGTA TTGTCAGCTT AGAAATTCAG TGGTTCCATC ATGTTTTGTT CTTAAAAGGT GTCTCAGAGG ATTAATGAAG
GAAGGTGTAT TCAAATTGTT CTTGGTCAAT TCGTAAGTGA TGTGAGATTA TTGAGCATAT TAAAAGAAAC CTTAGTCAAA
GGCTAAGGGT AACAAGGGTT CATTTTTGGA ACCAGTTTTC CTTTTCCACA TATGATGTTC TAACCTAAAG TCCACTAAGG
TTGAACATTG TTAGGATTAA TCAATACATC TAAGGAATTG TCTGTTGAGT GGCCTCATCA TAGTTTTATC CTTAAAAGGT
ATCTCAGTGT TAAGAAAGAA AGACACTTTT AAATCGCCCT TAACCTTAAT TCCTAAAAAA ATGAGACTAT TGGATGTAGC
GAAACAATAA ATATATGTGT TTGTATGTAT GTACGTATAC ACACGCATAT TCTATATAGC ATTCTTAACA TACAGCTAAG
CCAATGTTTT TCATTGCTAA AATAAACATA TTGTAGTACT TGATTTTGGT GTCTGCAAAT GAAATTTGTG TCCGACATAT
TTACATTTAA AATAAATATG CTTGATTTAC TCAATTTTGC ATTGAAATGT GGCCTTTTGT CTTATGCTAT TTGTTGGATC
TTTCAGGTGT CTGTCTTGGC AGATGACATT CTAAAGAATG TGGAGTATGA TGCATTAAGG ATTGTTTTCA ACAAATTTCA
TTCTGTTGTT TCATTTTTGC CAACAGTGTC AACTATACTA TCTCCTGAGG TACTTCTATT TACTGTATTT TTTATATTGT
CTACAGTATT AAAAATTTTC TATTTGAGTC CTGTCATCTA ATCTTGGTTT ATTGTTGCTT TGATATTTTG GGCACGTTTT
GGAAAGATAT GCTTTGGTAT TCTGCCTTTT ACTTTCAACT TATGAAGTAA GGTAATTTTC ATGTAGGTTA TCGAGAGAGA
GGCTGAATCA GGAGGAAAGC TTGGGGAACT AGATTCATAT GAGATTGAAG GTGGCGAGAC AAAATCTGAA ATTCTTCAGA
ATCTGGCTGA GTTCCAGTTT TCTTGTGTAA GTAATTTTAA AAACATTCTG ACAAAATAGC TTTTAGTGCA TTTTTTTTGC
TTTACTATAA TGGATATTAA TATAAACATC TGGTATTGGC CTATTGAAAT TTTATGGTAA TGTTTCTTTT ACTTAGTTCA
TAGGAAATGA TAACTCGATA TCTTTTCATA CACGTCAAAA TGATAGAAAA AAATATCCTT TAACCCGACA CCCTATATGT
CTACTTTTCC TAAACTGATG GCAATAAAAT AATATCTTCA CAAGAGAAAA TCGTCCCTGA TGAAATGACT AATTGTTGGA
GCCCAGGGCA GGTCTAAACA TGAGCGGTGT ATGGGGGATG GATGTATGTG TTCTTTTATC TGCACGGGAA GAGGTTTCTA
GGATTGCAAT TGGTGACCTC CAGAGACTAG GGCAACGACC TTATTGTTGT GCTAGGACTA ACCCACAACT ATTGAAGCTA
TACTAAGGAA AAGAAAGAAA GAAACTTGGC AAAAGTTCCA TGGTCGGAAT TTATTCCTGT TGTATATTAT ACACTGAAAG
AACCACCATG CTAACTAGTA AAATGTGTGA TCCTCCTTTT AATAGACCTT TTCATTGACG AATTCTGAAT TGTTTTCCCA
TGTCAATAAG AAAAATGAAA ATTTTGATAA ATAAAATTCA CACATTATAG CGAACATATG CTTAGTGTTC GCCACCACCA
CCACCTCTCC CTCTCCCTTT CCTTAGTGGA CTGCTCCTGT GGTTGCTTGT ACACTAGGTT TGGTGAAATA GCATGGAATT
GAGAGGAAAT AGAAGTGATG TTTAAAATTG AGGTTGTTTG GTAAAGATGA AATATGAAGT TGGAGGTCCC ATACAAAAAA
ATCATTTACA TTGTTAGTTG CCCATATTAA CCTTTTATTG CACGTCTCAC CTTATCATTT GGTTCCAGTT TCAGAAGCTT
ATATGTCTTT TTTTACGACC ATGCTTTCCT TTTACACTAT GCAGGTCATG TACAATGCGG TGTTGGAGAA TGCTTGCAGT
GAGCAAGGAG CAAGAATGTC AGCCATGGAC AGCTCTAGTA GGAACGCTGG GGACATGCTT GATCGTCTCA CCCTCACTTA
TAACAGGTCT CTTTTTCTTT CTCTTCTACA TGCCTGTTTA ATCGTTTTCA ACATTCAATT CTTTAGTGGG AAATATATAA
AATGATGGGT AGGAACTCGT AAGTCTAAAC AGTATTGGTG ATTGGAAGAG AGAGAAACTA AGTATTTATA TGTCTTTGAA
GTTAAGAGGG TTTCATTTCA TGTATCATTA TTACTATTCC TTGGATCTGG GCTATCCAAT ATGATTCCAT TATTATCTGC
CAATACAGTT TTGCACTTTT TGTTTTGACT GACTGGTCTC TGTTAATTTT GTGGCAGAAC TCGTCAAGCA TCTATCACCA
CAGAATTGAC AGAGATTATC TCTGGAGCTT CAGCACTGGA AGGTTAATTT GTGGGGAGCA ATCTGTAATA TACTCAACAG
TGGCGATATC AAGTTAATAT CGTTGGTGCC ACATTTTTTT AGTCTCTCAC TCCTTCGACT TCTGTAATAA GTTTTCCATG
GCGGGATCCA TTTTCAGGAT TCCCTGGTTG AGACTATATT TCTGGAATTG TGTTTTTTAT GTTAAGATAG AGTCTGTCTT
TTTTTAACTC GAAATGCATT ATCATAAGAT TTTTTCCCAT TCTAATAATG TCGTTTCTCA TACCCCAACA TTGTGAAACA
GTTGGACAAC TGTGTTTTAT TAAAGCGGTA TGCTAGTTGG TGTTATTCCC GTAGGATTAA GTGAGATAAA ATTATTTATA
ACATTTTTTT ATGGAA

>Vigan.02G260600.01
TTTTCCTAGT AAAGCAGTAA CAAACCTACG GGGAATAGAA ATGTGCGTGG GGCATGTGAT ACATAACGCA GCATCCATAC
ATATGAGACC ATATTGAACA GTGTTGGCAT TGTTCCTGAA CGAAAACAAA TAGGGGCTTC TTCAGTTGTC TGTGTGTAAC
ACCGCTAGGG TTTCGCAAGA GCGATCACAA ACGAAGATGG CAATGGCTGC TGTTCTGCGT CGCGAAGGGA GGCGTTTGAC
CCAACCAATC AACGCTCTCC ATTCCTCTCT CATCTCTCAA GACCAAGCTC CTCATGGTTC GCGCTCCGTT TCCACCCAAG
TAGTGAGGAA CCGAATGAAG AGTGTGAAGA ATATCCAGAA AATCACCAAG GCCATGAAGA TGGTTGCCGC ATCCAAGCTT
CGAGCCGTTC AAACAAGAGC TGAAAATTCC CGTGGCCTCT GGCAACCATT CACTGCCCTT CTCGGTGACA ATCCAAGTGC
TGATGTTAAG AAGAATGTTG TTGTTACCGT TTCCTCGGAC AAAGGTCTTT GTGGTGGAAT CAATTCCACA TCTGTCAAGA
TAAGCAGGGT TTTGCACAAA TTGAATTCCG GGCCTGATAA AGAGACAAAA TATGTCATAC TGGGAGAGAA GGCTAAGGCT
CAATTGTTAC GTGACTCAAA GAAAAATATC GAGCTCTCCC TTACTGAATT GCAGAAGAAT CCTCTGAATT ATACTCAGGT
GTCTGTCTTG GCAGATGACA TTCTAAAGAA TGTGGAGTAT GATGCATTAA GGATTGTTTT CAACAAATTT CATTCTGTTG
TTTCATTTTT GCCAACAGTG TCAACTATAC TATCTCCTGA GGTTATCGAG AGAGAGGCTG AATCAGGAGG AAAGCTTGGG
GAACTAGATT CATATGAGAT TGAAGGTGGC GAGACAAAAT CTGAAATTCT TCAGAATCTG GCTGAGTTCC AGTTTTCTTG
TGTCATGTAC AATGCGGTGT TGGAGAATGC TTGCAGTGAG CAAGGAGCAA GAATGTCAGC CATGGACAGC TCTAGTAGGA
ACGCTGGGGA CATGCTTGAT CGTCTCACCC TCACTTATAA CAGGTCTCTT TTTCTTTCTC TTCTACATGC CTGTTTAATC
GTTTTCAACA TTCAATTCTT TAGTGGGAAA TATATAAAAT GATGGGTAGG AACTCGTAAG TCTAAACAGT ATTGGTGATT
GGAAGAGAGA GAAACTAAGT ATTTATATGT CTTTGAAGTT AAGAGGGTTT CATTTCATGT ATCATTATTA CTATTCCTTG
GATCTGGGCT ATCCAATATG ATTCCATTAT TATCTGCCAA TACAGTTTTG CACTTTTTGT TTTGACTGAC TGGTCTCTGT
TAATTTTGTG GCAGAACTCG TCAAGCATCT ATCACCACAG AATTGACAGA GATTATCTCT GGAGCTTCAG CACTGGAAGG
TTAATTTGTG GGGAGCAATC TGTAATATAC TCAACAGTGG CGATATCAAG TTAATATCGT TGGTGCCACA TTTTTTTAGT
CTCTCACTCC TTCGACTTCT GTAATAAGTT TTCCATGGCG GGATCCATTT TCAGGATTCC CTGGTTGAGA CTATATTTCT
GGAATTGTGT TTTTTATGTT AAGATAGAGT CTGTCTTTTT TTAACTCGAA ATGCATTATC ATAAGATTTT TTCCCATTCT
AATAATGTCG TTTCTCATAC CCCAACATTG TGAAACAGTT GGACAACTGT GTTTTATTAA AGCGGTATGC TAGTTGGTGT
TATTCCCGTA GGATTAAGTG AGATAAAATT ATTTATAACA TTTTTTTATG GAA

>Vigan.02G260600.01
ATGGCAATGG CTGCTGTTCT GCGTCGCGAA GGGAGGCGTT TGACCCAACC AATCAACGCT CTCCATTCCT CTCTCATCTC
TCAAGACCAA GCTCCTCATG GTTCGCGCTC CGTTTCCACC CAAGTAGTGA GGAACCGAAT GAAGAGTGTG AAGAATATCC
AGAAAATCAC CAAGGCCATG AAGATGGTTG CCGCATCCAA GCTTCGAGCC GTTCAAACAA GAGCTGAAAA TTCCCGTGGC
CTCTGGCAAC CATTCACTGC CCTTCTCGGT GACAATCCAA GTGCTGATGT TAAGAAGAAT GTTGTTGTTA CCGTTTCCTC
GGACAAAGGT CTTTGTGGTG GAATCAATTC CACATCTGTC AAGATAAGCA GGGTTTTGCA CAAATTGAAT TCCGGGCCTG
ATAAAGAGAC AAAATATGTC ATACTGGGAG AGAAGGCTAA GGCTCAATTG TTACGTGACT CAAAGAAAAA TATCGAGCTC
TCCCTTACTG AATTGCAGAA GAATCCTCTG AATTATACTC AGGTGTCTGT CTTGGCAGAT GACATTCTAA AGAATGTGGA
GTATGATGCA TTAAGGATTG TTTTCAACAA ATTTCATTCT GTTGTTTCAT TTTTGCCAAC AGTGTCAACT ATACTATCTC
CTGAGGTTAT CGAGAGAGAG GCTGAATCAG GAGGAAAGCT TGGGGAACTA GATTCATATG AGATTGAAGG TGGCGAGACA
AAATCTGAAA TTCTTCAGAA TCTGGCTGAG TTCCAGTTTT CTTGTGTCAT GTACAATGCG GTGTTGGAGA ATGCTTGCAG
TGAGCAAGGA GCAAGAATGT CAGCCATGGA CAGCTCTAGT AGGAACGCTG GGGACATGCT TGATCGTCTC ACCCTCACTT
ATAACAGGTC TCTTTTTCTT TCTCTTCTAC ATGCCTGTTT AATCGTTTTC AACATTCAAT TCTTTAGTGG GAAATATATA
AAATGA

>Vigan.02G260600.01
MAMAAVLRRE GRRLTQPINA LHSSLISQDQ APHGSRSVST QVVRNRMKSV KNIQKITKAM KMVAASKLRA VQTRAENSRG
LWQPFTALLG DNPSADVKKN VVVTVSSDKG LCGGINSTSV KISRVLHKLN SGPDKETKYV ILGEKAKAQL LRDSKKNIEL
SLTELQKNPL NYTQVSVLAD DILKNVEYDA LRIVFNKFHS VVSFLPTVST ILSPEVIERE AESGGKLGEL DSYEIEGGET
KSEILQNLAE FQFSCVMYNA VLENACSEQG ARMSAMDSSS RNAGDMLDRL TLTYNRSLFL SLLHACLIVF NIQFFSGKYI
K*