GBrowse Details

Vigan.02G177000.01

Basic Information:
Name: Vigan.02G177000.01
Multiple alignment
Variant Information
Position: Chr02:18289956..18292644 (- strand)
Length: 2689
Functional Information:
Description: Similar to Uncharacterized protein. [I1KB59, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:39.18,3.25,11.14,11.70,34.39,60.77,45.78,37.72
Arabidopsis thaliana homolog: AT3G10870.1
Automatic updates:
Name: BT092689 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-22C2 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:18289956..18290025 (- strand)
Length: 70
Type: three_prime_UTR
Position: Chr02:18290026..18290304 (- strand)
Length: 279
Type: CDS
Position: Chr02:18290699..18290833 (- strand)
Length: 135
Type: CDS
Position: Chr02:18291935..18292075 (- strand)
Length: 141
Type: CDS
Position: Chr02:18292166..18292450 (- strand)
Length: 285
Type: CDS
Position: Chr02:18292451..18292644 (- strand)
Length: 194
Type: five_prime_UTR

>Vigan.02G177000.01 class=Sequence position=Chr02:18289956..18292644 (- strand)
TGAAAATGAC CCCAAGAAGG AATGAATAGA TATAAATATA AAGCTCTGAA TATTGGAATA ATATTAAGAA GGAAAGTTAC
AAAGATAAAC GTCACTACTC GTGCTGCTGA GCTGACCCTT CAACACGTAT TATTGTTATC GTATATATTA TATATGTGAG
TGTGTTTTTC CTGACCAAGA AGATTGAAAG AAAAATGATA GTGAAGGCAG AGAAAAGTAT GACTGAGGGA GGTAGGGAAG
ACGGAGATGT TGTTGGTGTT GGGTTGAAGC AGCACTTTGT GCTTGTACAT GGCATAGGTG GGGGAAGTTG GTGCTGGTAC
AAAATCCGAT GCCTTATGGA GAATTCTGGC TATAAGGTGT CATGCATAAA CCTGAAAAGT GCTGGAATTG ATCAATCTGA
TGCAGATTCT TTGCTATTCT TTGATGATTA TAATAAACCT CTAATGGATT TCATGTCTTC TTTGCCTGAG AATGAACAGG
TGGTCCCCCC TCCTCTCTTA TGACCCTTTC TTTGTATGTG ATTACATAGA GTGGCATCAG AACTCATATC ACTCATGTGG
TTGCTATAGG TTATATTGGT GGGGCACAGC GCTGGAGGCT TGAGCATTAC TCAGGCCTGT CACAAGTTTG CAAATAAGAT
CCGTTTAGCT GTTTATGTGG CAGCCACTAT GCTCAAATCG GGATACTTGA CCGAACAAGA TCTCAAAGAT GTGAGTCCTT
TTCGTAAACT CTCTCATCTG TTCTCGATTG GTATGTTTTG AGATTGAATT TGAATTATGC TTCTTTCTTG ATATTGGAGT
TTGGTAGTTT CTGTGCTCAA GGTGAATGAG TGTCATAAAC TTGGGATTAG GGGTAGTTTC GCTGATCGGT GTTTGGAATC
TTGAAGGTTT CCAGCAAGGA TGATGCCGAT GCTCTGTTGA AATAATTGGT TGCCAACTGT CTTCACAAAC AGATTGTAGA
TTTTAGTTCT TAGCCAACTC TGAGACTCAC TAAATTATGC TTCTACTTAC CTACTCTCAG TTTTTTCCCA AGGATAGCAC
CATGTGCAAA CAAATCAGCA GCTGTTTAGC AATAGGAATA GGAGAGTTTG TTTGTTCGGC ATGAAAGGGA CGTTTTTCAA
CTGGGACTTT TTTCATTTCT CTATTTTACG TTATCCCTCT TTTCTTTCCT TTGTTTAGGA GAAAATTCTT TTTCGTTTAT
CTCACTATTA GAGTTTTTGA TTTGGTCAAT GACCTTTTCT ACTCAGATTA CCACCTTTAC AGGCTTTGAC AACGAACTAG
TTGGAATTTA ATAATGATCA GTAAAAGGGA CAGGCATTCT GACCCGGGGT GGATTCTTAT TTAACTCTGA AAAACAATGA
AAACAAAGCT ATCTCTAACC CAATCTCGTA AAAGCCTAGA CCTAGAATGT GTACGAACAA AGCTAATTGT CTTTATTCAA
AATCATTACA AATTCCCTTC TGTGTCTACT CTGGTTTATG AATTATCATC CGTAATTGTG TGCCACCCAA ACAAACTCCT
ATAAAATAAC AATCCCTGTA TTAATGATTA TAAGCAATCT TTCTTTGGAG ACAAAAAAAC TTCCAAACCT CTTTCTTTCT
TTTCGGTCCG ACAACCCTTT CTTTTCCACA GATCTAAATT GTAGCCAAAA TCAAATTTTG ACTGTGTTCA ATGTGCCCCT
AATGATTGAA AAGCAACACA GATTCACGAG CCTAATTGCT AGAATTAAGT ATGATAGTAG AGTGGCTAAT TTTCTGTGCC
ACCGATAAAT AGCAGATATA ATAGAAAGTT TTTCTGGTGT CTAACAAACA GGGTGTGCCT GACTTATCTG AATATGGGGA
TGTGTACGAG CTAGGATTCG GATTGGGACG TGATAAGCCT CCAACCAGTG CTTTGGTGAA GAGAGAATTT CAACGCAAAA
TCCTCTACCC TTTGAGCCCT CAAGAGGTAC GTACATAAAT ATGATAATTA ATTAATTAAT TAATATCTCA CTATAAATGA
TAAAAAAAAA AAAAAGACAT GCTATGCTAT GCTACATTTC TGAAGCTATC CTATGTTGCA CTGGAATTGC ATGCAGTGTC
TATAGACCTG TTTGATAGTA TGTCACTTTC TCGAAGCATT AGGGAGTAGC GTACCCCACA TGACATACTT TGGCCTATTG
TTAACGTTAT CCTCATCTTT GCCATGTGTA GGACCATTTT TGACGATTCC TTGAAAAAAA AACATAATTA TTCTTCCAAA
TGAAAACAAC TTTAAGAAAA AAATGAAGTT GGCATGTGCA TGCAGTCCAT ATATATAGTT GAACTGTGAG TGAGGAATGA
ATAGTGGAAT GATGTGTCAG GATTCAACCT TGGCTGAGAT GCTGTTGAGG CCAGGGCCAT TGGTAGCATT GACGAGTGCA
CAATTCAGAG AAGAGGGTGA TGAAGGAGTG GAGAAGGTGC CCCGCGTGTA CATAAGGACA AAGCAAGACA AGGTGGTGAA
GGCAGAGCAA CAGGAAGCCA TGATAAAGAA GTGGCCACCA TCTACTGTGT ATGAACTGGA CACAGACCAT AGCCCTTTCT
TCTCTTCCCC ATTCCTTCTC TTTGGCTTGC TTCTAAAAGC TGCAGCTTTG GATGTTTAAT TCCATGCAAC TGCTCTATGA
ACACTGCTCT TCCATGCTCT TTTCTTCGTT GCTCTCCAAA ACTCTGAAT

>Vigan.02G177000.01
TGAAAATGAC CCCAAGAAGG AATGAATAGA TATAAATATA AAGCTCTGAA TATTGGAATA ATATTAAGAA GGAAAGTTAC
AAAGATAAAC GTCACTACTC GTGCTGCTGA GCTGACCCTT CAACACGTAT TATTGTTATC GTATATATTA TATATGTGAG
TGTGTTTTTC CTGACCAAGA AGATTGAAAG AAAAATGATA GTGAAGGCAG AGAAAAGTAT GACTGAGGGA GGTAGGGAAG
ACGGAGATGT TGTTGGTGTT GGGTTGAAGC AGCACTTTGT GCTTGTACAT GGCATAGGTG GGGGAAGTTG GTGCTGGTAC
AAAATCCGAT GCCTTATGGA GAATTCTGGC TATAAGGTGT CATGCATAAA CCTGAAAAGT GCTGGAATTG ATCAATCTGA
TGCAGATTCT TTGCTATTCT TTGATGATTA TAATAAACCT CTAATGGATT TCATGTCTTC TTTGCCTGAG AATGAACAGG
TTATATTGGT GGGGCACAGC GCTGGAGGCT TGAGCATTAC TCAGGCCTGT CACAAGTTTG CAAATAAGAT CCGTTTAGCT
GTTTATGTGG CAGCCACTAT GCTCAAATCG GGATACTTGA CCGAACAAGA TCTCAAAGAT GGTGTGCCTG ACTTATCTGA
ATATGGGGAT GTGTACGAGC TAGGATTCGG ATTGGGACGT GATAAGCCTC CAACCAGTGC TTTGGTGAAG AGAGAATTTC
AACGCAAAAT CCTCTACCCT TTGAGCCCTC AAGAGGATTC AACCTTGGCT GAGATGCTGT TGAGGCCAGG GCCATTGGTA
GCATTGACGA GTGCACAATT CAGAGAAGAG GGTGATGAAG GAGTGGAGAA GGTGCCCCGC GTGTACATAA GGACAAAGCA
AGACAAGGTG GTGAAGGCAG AGCAACAGGA AGCCATGATA AAGAAGTGGC CACCATCTAC TGTGTATGAA CTGGACACAG
ACCATAGCCC TTTCTTCTCT TCCCCATTCC TTCTCTTTGG CTTGCTTCTA AAAGCTGCAG CTTTGGATGT TTAATTCCAT
GCAACTGCTC TATGAACACT GCTCTTCCAT GCTCTTTTCT TCGTTGCTCT CCAAAACTCT GAAT

>Vigan.02G177000.01
ATGATAGTGA AGGCAGAGAA AAGTATGACT GAGGGAGGTA GGGAAGACGG AGATGTTGTT GGTGTTGGGT TGAAGCAGCA
CTTTGTGCTT GTACATGGCA TAGGTGGGGG AAGTTGGTGC TGGTACAAAA TCCGATGCCT TATGGAGAAT TCTGGCTATA
AGGTGTCATG CATAAACCTG AAAAGTGCTG GAATTGATCA ATCTGATGCA GATTCTTTGC TATTCTTTGA TGATTATAAT
AAACCTCTAA TGGATTTCAT GTCTTCTTTG CCTGAGAATG AACAGGTTAT ATTGGTGGGG CACAGCGCTG GAGGCTTGAG
CATTACTCAG GCCTGTCACA AGTTTGCAAA TAAGATCCGT TTAGCTGTTT ATGTGGCAGC CACTATGCTC AAATCGGGAT
ACTTGACCGA ACAAGATCTC AAAGATGGTG TGCCTGACTT ATCTGAATAT GGGGATGTGT ACGAGCTAGG ATTCGGATTG
GGACGTGATA AGCCTCCAAC CAGTGCTTTG GTGAAGAGAG AATTTCAACG CAAAATCCTC TACCCTTTGA GCCCTCAAGA
GGATTCAACC TTGGCTGAGA TGCTGTTGAG GCCAGGGCCA TTGGTAGCAT TGACGAGTGC ACAATTCAGA GAAGAGGGTG
ATGAAGGAGT GGAGAAGGTG CCCCGCGTGT ACATAAGGAC AAAGCAAGAC AAGGTGGTGA AGGCAGAGCA ACAGGAAGCC
ATGATAAAGA AGTGGCCACC ATCTACTGTG TATGAACTGG ACACAGACCA TAGCCCTTTC TTCTCTTCCC CATTCCTTCT
CTTTGGCTTG CTTCTAAAAG CTGCAGCTTT GGATGTTTAA 

>Vigan.02G177000.01
MIVKAEKSMT EGGREDGDVV GVGLKQHFVL VHGIGGGSWC WYKIRCLMEN SGYKVSCINL KSAGIDQSDA DSLLFFDDYN
KPLMDFMSSL PENEQVILVG HSAGGLSITQ ACHKFANKIR LAVYVAATML KSGYLTEQDL KDGVPDLSEY GDVYELGFGL
GRDKPPTSAL VKREFQRKIL YPLSPQEDST LAEMLLRPGP LVALTSAQFR EEGDEGVEKV PRVYIRTKQD KVVKAEQQEA
MIKKWPPSTV YELDTDHSPF FSSPFLLFGL LLKAAALDV*