GBrowse Details

Vigan.02G075500.01

Basic Information:
Name: Vigan.02G075500.01
Multiple alignment
Variant Information
Position: Chr02:5792240..5794503 (+ strand)
Length: 2264
Functional Information:
Description: Similar to Uncharacterized protein. [C6T0E5, Glycine max]
InterPro: PPPDE putative peptidase domain (IPR008580)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:5.58,6.40,8.70,8.53,10.05,13.44,13.17,12.18
Automatic updates:
Name: BT090899 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-5J23 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:5792240..5792430 (+ strand)
Length: 191
Type: five_prime_UTR
Position: Chr02:5792431..5792569 (+ strand)
Length: 139
Type: CDS
Position: Chr02:5792854..5793141 (+ strand)
Length: 288
Type: CDS
Position: Chr02:5793800..5794044 (+ strand)
Length: 245
Type: CDS
Position: Chr02:5794045..5794503 (+ strand)
Length: 459
Type: three_prime_UTR

>Vigan.02G075500.01 class=Sequence position=Chr02:5792240..5794503 (+ strand)
TTTCGGCCGC CGATAGATGC CAGAGCCGCA CTCATAGAGA TTCTTTATCT TCTTCTTTCC ATTCTTCTTC ATTTTCTTTT
CTTTTCTTCT TCCTAACTAA AAGGACCACT CATATTCTTC TCTCTATCAC CCACAAAAAC GCTTTCTTTG TATTTTTCTC
TCCATTTCAC TGTTATTTCA GACACTCCAC AATGCTGCGT AAGCTTGTCT CAGGGCCACC CAAGAACAAG CCCGGCACCG
TCCCCGTTCA CCTCAACGTC TATGATCTCA CCCCAATCAA TGGCTATGCC TATTGGCTTG GCCTTGGTGT CTACCATTCT
GGGGTTCAAG GTAACCCTTT AACCAATTCC CTCTCTTTTT TCTCTCCTTT TTTTCTTCTT TTTTTCTTTC ATATCGCCAA
ACCCAAATCA AGGTACTCTT CAATTTACAA AAAAAAAAAA AACATTTGCT CAGACCGAAC ATTCGGGTTG TTTGATACAA
CGTTATCGGT TTGTTTGTCA ACTATCATTA CTCATTATTG TGTTACAAAT CCAACCATAT TATGTTATTT GGGTGTACAA
TAGTACCTGT TTTTTCTTTC TTAGTTGATA ATTAAAGTAT TCTTTTACAT TTAGTTCACG GTGTTGAGTA CGGTTTTGGT
GCACATGAGC ATGACACAAC GGGGATTTTT GAAGTGCAAC CGAAACACTG TCCTGGGTTC ACTTTCAGAA AGTCGATTTT
CATCGGAACA ACAGATCTGG GTCAGAAAGA TGTTCGGGCG TTCATGGAGA AACTGGCTCA GGAGTACTCT GGCAACACCT
ATCATCTCAT CTCCAAAAAC TGCAACCACT TCTGTAACGA TGTTTGCCTC AAGTTAACGG GAAAGTCAAT CCCTCGATGG
GTCAATCGCC TTGCTCGACT TGGTAAGGAA TACATTGATC CTATTCTTGT GCTTTATTAA CTTGTTATCT TTTGTAGTTT
GTGTCTGTTG ATTTTTCACA TGTCGCCAGT GAAAACTCCT ATGGCACCTA CGTTGACGTT ATCATAGTTG AATGTTGTGT
ACGGCTTTTA GCTATTGGTG TTGGGTTTTC TTTTTTAGTT AGAATGATAT CTTTTAGGAA AAAAAGGACA GAACTTGCTC
ACTTGCTCTT GGTGTTGTCT TTTAATTTGA ATTGGAGTTC TTAGCAGCAG CTTTCGTTAG ATGTGAAAAC TACATCTATG
TTTTTTTGGG ACAAAATCGA GAAGCAAAAT TAGAGTTAGT AAAGGTTTGT CTTAAGGTCA ACATAGATTA TTAAAGTGAA
ATTTCAATTC TGATTAGAAA AGAACTACAC TTAAAAGAGT AATTATAAAT TGGCTGACAA AGAAGCATGC TTCTTACAAC
ACAGTACAGC CCTTGCAGAA AGTGGCAAGA GGAATGCTCT TTGAGAGCTT TTACTGATAT ATTTTGATTA TGCAAAAAAT
TTCTTCACAA TTAAGTATGT GAATTGATGT TCCTATGATG CACTTTGTAA ACAAAATTTA TGTGATTTCA AAACAACGAG
TGAGCATTTC TGAGTTTGAG TTGTGCTCCT TTACGTGAAG GTCTTCTTTG CAACTGCGTT CTTCCCCCTG GGCTAAATGA
CACGAAGGTT CCACAAGCTA CATCAGAGAG AGTTCAGGAG GGAGAAAAGA GGAAAATAAG AAGTCAATCC TGCAGGTACG
AGGGTTCTTC GAATCCTTCA TTGTCACGAC GTTCGGCAAT TAAAAGTAGT AGCCAAAGAC ATTGTCTTCC AGGATCTACA
TCTTTGCTTA ATGCTACTCC AGCCTCAACC TTAACAGTGA AGTAGTAAAG CTTTGACAAA TATAGGGTGC AAGCAACCCC
AGATGAGCAC GGAAGAAAGT TGTTTATTTG GTTAATCTTT CTGTTCTGAT GTATATCTGT ATGTCAAATA GCTGAATGGT
TGCTTTGTTT TGTCTCTGTT CGTTGTAAAA TGGTTTCGTT CTTAGTGAAT GGAAAGTTCT TCTGTTTCTG CATTTTTTTG
CTATGTAATC TTGATTGATC TTCCTTATTC CGTTGGGTCA GTCCGGTTTT AAAAACAAAG CATATTAAAG GAAAACCAAA
ATCTGAGAAA TTTTGTGACA AGTTGTTTCT GCAGTTTTCT CAGATATGCT TCGTTAACAT CTGTATCAAA AGATCAACAG
TTTCTCAGTT ATCTCTGTCT TGCTATGCTG TACCTGTATG TTTTGATGCA TTTTTGTTCC ACGTAATCGT CATCCATTAA
TATTCTCATG TTTGCTATAC TTTG

>Vigan.02G075500.01
TTTCGGCCGC CGATAGATGC CAGAGCCGCA CTCATAGAGA TTCTTTATCT TCTTCTTTCC ATTCTTCTTC ATTTTCTTTT
CTTTTCTTCT TCCTAACTAA AAGGACCACT CATATTCTTC TCTCTATCAC CCACAAAAAC GCTTTCTTTG TATTTTTCTC
TCCATTTCAC TGTTATTTCA GACACTCCAC AATGCTGCGT AAGCTTGTCT CAGGGCCACC CAAGAACAAG CCCGGCACCG
TCCCCGTTCA CCTCAACGTC TATGATCTCA CCCCAATCAA TGGCTATGCC TATTGGCTTG GCCTTGGTGT CTACCATTCT
GGGGTTCAAG TTCACGGTGT TGAGTACGGT TTTGGTGCAC ATGAGCATGA CACAACGGGG ATTTTTGAAG TGCAACCGAA
ACACTGTCCT GGGTTCACTT TCAGAAAGTC GATTTTCATC GGAACAACAG ATCTGGGTCA GAAAGATGTT CGGGCGTTCA
TGGAGAAACT GGCTCAGGAG TACTCTGGCA ACACCTATCA TCTCATCTCC AAAAACTGCA ACCACTTCTG TAACGATGTT
TGCCTCAAGT TAACGGGAAA GTCAATCCCT CGATGGGTCA ATCGCCTTGC TCGACTTGGT CTTCTTTGCA ACTGCGTTCT
TCCCCCTGGG CTAAATGACA CGAAGGTTCC ACAAGCTACA TCAGAGAGAG TTCAGGAGGG AGAAAAGAGG AAAATAAGAA
GTCAATCCTG CAGGTACGAG GGTTCTTCGA ATCCTTCATT GTCACGACGT TCGGCAATTA AAAGTAGTAG CCAAAGACAT
TGTCTTCCAG GATCTACATC TTTGCTTAAT GCTACTCCAG CCTCAACCTT AACAGTGAAG TAGTAAAGCT TTGACAAATA
TAGGGTGCAA GCAACCCCAG ATGAGCACGG AAGAAAGTTG TTTATTTGGT TAATCTTTCT GTTCTGATGT ATATCTGTAT
GTCAAATAGC TGAATGGTTG CTTTGTTTTG TCTCTGTTCG TTGTAAAATG GTTTCGTTCT TAGTGAATGG AAAGTTCTTC
TGTTTCTGCA TTTTTTTGCT ATGTAATCTT GATTGATCTT CCTTATTCCG TTGGGTCAGT CCGGTTTTAA AAACAAAGCA
TATTAAAGGA AAACCAAAAT CTGAGAAATT TTGTGACAAG TTGTTTCTGC AGTTTTCTCA GATATGCTTC GTTAACATCT
GTATCAAAAG ATCAACAGTT TCTCAGTTAT CTCTGTCTTG CTATGCTGTA CCTGTATGTT TTGATGCATT TTTGTTCCAC
GTAATCGTCA TCCATTAATA TTCTCATGTT TGCTATACTT TG

>Vigan.02G075500.01
ATGCTGCGTA AGCTTGTCTC AGGGCCACCC AAGAACAAGC CCGGCACCGT CCCCGTTCAC CTCAACGTCT ATGATCTCAC
CCCAATCAAT GGCTATGCCT ATTGGCTTGG CCTTGGTGTC TACCATTCTG GGGTTCAAGT TCACGGTGTT GAGTACGGTT
TTGGTGCACA TGAGCATGAC ACAACGGGGA TTTTTGAAGT GCAACCGAAA CACTGTCCTG GGTTCACTTT CAGAAAGTCG
ATTTTCATCG GAACAACAGA TCTGGGTCAG AAAGATGTTC GGGCGTTCAT GGAGAAACTG GCTCAGGAGT ACTCTGGCAA
CACCTATCAT CTCATCTCCA AAAACTGCAA CCACTTCTGT AACGATGTTT GCCTCAAGTT AACGGGAAAG TCAATCCCTC
GATGGGTCAA TCGCCTTGCT CGACTTGGTC TTCTTTGCAA CTGCGTTCTT CCCCCTGGGC TAAATGACAC GAAGGTTCCA
CAAGCTACAT CAGAGAGAGT TCAGGAGGGA GAAAAGAGGA AAATAAGAAG TCAATCCTGC AGGTACGAGG GTTCTTCGAA
TCCTTCATTG TCACGACGTT CGGCAATTAA AAGTAGTAGC CAAAGACATT GTCTTCCAGG ATCTACATCT TTGCTTAATG
CTACTCCAGC CTCAACCTTA ACAGTGAAGT AG

>Vigan.02G075500.01
MLRKLVSGPP KNKPGTVPVH LNVYDLTPIN GYAYWLGLGV YHSGVQVHGV EYGFGAHEHD TTGIFEVQPK HCPGFTFRKS
IFIGTTDLGQ KDVRAFMEKL AQEYSGNTYH LISKNCNHFC NDVCLKLTGK SIPRWVNRLA RLGLLCNCVL PPGLNDTKVP
QATSERVQEG EKRKIRSQSC RYEGSSNPSL SRRSAIKSSS QRHCLPGSTS LLNATPASTL TVK*