GBrowse Details

Vigan.02G044900.01

Basic Information:
Name: Vigan.02G044900.01
Multiple alignment
Variant Information
Position: Chr02:3282363..3287272 (+ strand)
Length: 4910
Functional Information:
Description: Similar to BZIP transcription factor 6. [T2DP33, Phaseolus vulgaris]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: Basic-leucine zipper domain (IPR004827)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:86.77,12.70,14.32,24.27,12.66,10.53,10.54,20.57
Arabidopsis thaliana homolog: AT1G45249.3
Automatic updates:
Name: KT031146 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max clone HN_WYQ_35 BZIP transcription factor (Glyma04g04170.1) mRNA, partial cds.
PubMed ID: 26268547 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:3282363..3283034 (+ strand)
Length: 672
Type: five_prime_UTR
Position: Chr02:3283035..3284102 (+ strand)
Length: 1068
Type: CDS
Position: Chr02:3285074..3285145 (+ strand)
Length: 72
Type: CDS
Position: Chr02:3285266..3285295 (+ strand)
Length: 30
Type: CDS
Position: Chr02:3286693..3286767 (+ strand)
Length: 75
Type: CDS
Position: Chr02:3286768..3287272 (+ strand)
Length: 505
Type: three_prime_UTR

>Vigan.02G044900.01 class=Sequence position=Chr02:3282363..3287272 (+ strand)
GGGATTGTTA GTGTGAAGAG ACAGAAGGAC ACTTGGCGGT TGGAGCAGAG GGTTGGAGAG CGAGGAAGGA GGAACGCAGC
CAAGGAAGTG TAAACTCTCA TCAGACACCA AAATCATACC AAATCGGGAA TACCTAAGTT TTGTAAAATA AATAGCAAAG
GTATTGCTAT TGCTATTGCC CTCCATTCTT TTTATATGCT TACAAATTCT TATCTGCTTT TATTCCTCCA CTTTCTTATT
TCTATCTTTT CTATCTTTCA CTTCAAACAC TAACACGCAA CAATTCTCTT CACAATATCG TCTACTAGGG TTCAAATTCG
GATCTCAATT CATCTTATTA CTAGGATGCT ACATCTAATT ATTTCCTCCA TAATATGTAT AGATAAAATA GGTTACCGAG
ATAAAATGTA AGTGTAACAC AATCCAACTG TATCGCACTC ACTCACAATA GATTAACGCC TCTTTTGTAG TTTCATCATT
CTTGCAAGCT CTCTGCTTCT TCTTTTTTTA GGTTTTTATT TGGATGTAAA TAGTTTGTAC TTGGTTGGTA ATTCATGATT
CTCTGAATTT CCTGCTGGAA AATTAAGAAA CAGACTAGTG TTAGTTTGGT GGAAAACTGA GATTTGGATT CGGATCAGGT
TGGGATTGTG TTTGGTTGTT CATAGTTTCG ATATGAATTT CAAGAGCTTC GGGAATGAAG CTGGTGGCGA CGGAGGAGGG
AGGCCGGTGG GAAACTTCTC CCTCACGCGG CAGCCGTCGG TGTACTCGCT GACGTTCGAC GAGTTCATGA ACAGCATGGG
AGGTTCCGGG AAGGACTTTG GCTCCATGAA CATGGACGAG TTGCTCAAGA ACATTTGGAC GGCGGAGGAG GTTCAGACAA
TGACTTCGGC GGGCGTTGCC ACCGAGGACG TAGGAGCCGG CGTCAGCCAT TTGCAACGGC AGGGGTCGCT GACGCTGCCG
CGAACTCTGA GCCAGAAGAC AGTGGATGAG GTTTGGAAGG ACATTTCGAA GGATTACGGT GGGCACGGAG GGCCCAATCT
TGCACAGACG CCGAGACAGC CCACTCTGGG AGAGATGACT TTGGAGGAGT TTCTGGTCAG AGCTGGTGTT GTTAGAGAAG
ATGCGAAGCC AAACGACGGC GTTTTCATGG ATCTGGCTCG TGCGGGGAAT AACAACGGTT TGGGGTTTGG GTTCCAGCAG
ATGAACAAGG TTTCTACTGC TACCGGTTTG ATGGGTAACC GGTTGAACAA TGATCCACTG GTGGGTCTTC AGTCTTCTGC
CAATTTGCCT TTGAGTGTTA ATGGGGTGAG ATCGTCCAGT CAGCAGCCAC AGATGCAGAG TCCACAGTCT CAGCAACAGC
ATCAGCAGCA GATATTTCCT AAGCAGAGTC CTATGTCTTA TGCAGCTGCT CAGATGCCCC AGGGAATGGT TAGGGGTGGG
ATTGTGGGAC TCGGTGGTGA TCAGGGTTTG AGCATGCAAG GTGGAGGGAT TGGTAGGGTT GGTTTGGCAC CTGGGTCAGT
TCATGTTGCT ACTGGGTCTC CTGCTGCTAA CCAAATATCC GGTGATAAGA TGACCAAGAG CAATGGTGAT ACCTCGTCTG
TCTCACCGGT TCCTTATGTC TTTAACGGAG GCATGCGGGG GAGGAAGACT GGAGGAGCTG TGGAGAAGGT GATAGAGAGG
AGGCAGAGAA GGATGATAAA GAACAGAGAG TCAGCTGCCA GGTCACGGGC ACGCAAGCAG GTGAATATTT GTTCCACTAT
CCTAAATTTA GCAATCATAG TTCTCTTGCA TTTGCATATT CAAAGGAACA ATTACTTAAA TGCAAAAAGA CTGGTTTAAT
TTCTCTAGTT AGAACATAAG GATATCAATG GGTTGATGCA ATCACTTTAA ACATGTACAT AGGCATGTTT GAGTAAAAAT
TTAATTAAAA AGAGCTTATG TCATTAGGGC TTAATCTATA ACTTTGATGA GATCAAGCTA GCATGAAGCT TATTAAAAAG
CAGCTAAAAA GAGCTTTGGG AGGGTTGTAA GCTACGTTTT CAAGCTTTAA TTAAACACCT TTAACTTTCA GTTTAAATGC
CTAAATGCAA GACGAGCCTA TGATAAAACT TGTGTTTGTC TACAACTCAT CTGTTGTCTT GCAACCTCCA TCTACTGGTA
TGAGATAATC AAATGCCTGC CGTTGCAGAC TGTAGATTTT ACTTTCAATA TCAGAAAGGA GGGAGGAGTA GCTGTAACAT
TTTTCATGAA AATACGCCAC ATAATTTTCT ATAATAGGGT TAGTGAATGT TCAGTTCTAA AATCGAAAGA ATATGATGAC
GATATGCGTC ATGTTATTTC TTTACTAATA GTAATACTGC TCGGCCATTG ACGTTCTGCT TTTATCCTCT GTGAACATGC
TGTATACCTT GAAAGATTAT GCAGCAGAAT GGTAATATGA TAGCGATCTG ATCTGATGAA AGGTGAAAGA TTTTGAGAAG
TTACAATCAT GAGAAGTTGT AAAGATCCAG GTTATTACAA GGTAATTGAA CAGCTGGTTG GGAACATCAC TAACAGTTGG
ATCATCATAA AATCCAAAGA AGCATATAAT AAGTAAAAAT GTATTAACTT GCATGACATA ACGTGGGAGG AAGTGCAGGC
TGAAATTTTG TAAGATGTAT TTATTTTTCT GGTGTAAGTT CGGCCTCACA TTTTCATTTT GTTTGTTTCA GGCTTATACC
ATGGAATTGG AAGCAGAAGT TGCAAAGTTA AAAGAAGAGA ACCAAGAACT TGTGAAAAAA CAGGTAATTA TGGTTATTGA
CTCATGTCAC TTCACATACA AATGCAAGCA CCCATGTATA CGAATTTATG TCGAATGTTC GCATTAAAAT TTTCTCTAAT
CGACATTTAT TTGCGTATTG CAGGCTGAAA TCATGGAAAT TCAGAAAAAT CAAGTAAGTT TTTTTTTTTG TCAGCATTCC
ATTTGCTGTT TTTATTTTTC ATTAGTCCTT GTAAAGTATT TTGTAGACCT TAATTTAGGG AGTGCTGTAA CCTTATGTCC
TGTTGCATGA CTGATTGGTT AACATATATC ATGAATCAGG GTTAAATTTT CTACACGAGT ACATATTATT TTATCAGTCC
TTAACTAAGA CCATTTTTTT CCACAAAAAA TATTCACCGA CAAATGGAGC ATACCGAAGA AAATGTGGTC ACAAACTATG
TCAATCAGCG GCACAAATTG GTGTGCCGGT CATGTTAAAC TTGTGATGAA TGAGGTGGTA GGTTTGGTGC AAAATTGTGC
TACAATGATA GACCTGATTT GAACTACCAC CTACTTTAGG TTTTTCCGTT AATTATGTCA TGCGATTAAT TACTAAAACA
AGTGTTTCAG TCCATTTTTA TTTGATTAAA TATTTGTCAA TGTATTGTCT GTAAGGATCA CTTTTAATTC TCTATTTTAG
TCTCTGTCTC TCAGACATTT TTTCTTTGGT TTATGGGTGT TGAATTGATT TGATGATCAT TATGTAAAGC TAGTAAGAAA
TATGTTTTAA TATAACCATT TAAATGAACT GAAAATCCTG TTCACTTAGT AATCATCAAT CTTACAATAG AATCACATGA
AAGGTTGTAG TAGAGAGACA TCAGCAATAA TCACTGTCAG TGAATGTATT TTTGAGATCA GATAATTTTA GCCATGTAAA
CCAGTTTACT GATCTGTTCA TATGGCTTGT GTCCAAAAAG TCTTTTGGAA CAATATGTTA CTAGTTAGGT TGTTTTTTAT
TGTTGGGGGT GGGTGGGTAA ATTTTTGCTA CATTAGTGGA GGAGTGGTTT TGGAATTTCA GCTTAGAAGT CTCTAGGATT
TTCCGTATAA AGAAATGTCA GTTCCGTGCG GTGATTGTGC TTATGTTTTA AATTCCTGGA TAAGATATCA TATCTATATA
CAACTATCAC GTTCAGAAGT TTCATCATAT TAGCCTGTCA TGCCCCAAAC TCGGAGCTCT TTTGATGAGT ACAATACAAT
TACAGTGATT ATGAACTAGA ATGTCCTATT GACGAATTGA CGAATTCCTT TTTAATAAGG GTTTTCTCCC CTGCTTCGTT
GTGTTAATAT ATGTTTAGGA CTGTCTGCAC TTGTTCCAGA ATCGTATAAA GCTAAAACAT AGGATTTTCA AACTCGAACG
AAATGCTCCC ATTTCAATGG ACTATTAATT GATATTGTTC TGTCTGTGTT TTTTTCTTAC AAGTTGTTAC TGTAATATGC
AAGGACTTAC TGATTCAAAG TATATATTGT AAGAGATACA AATTTAAGCA TCCTTTTTAC TGAATTTGCT TTCATCCGAT
AATATTGCAG GTTAAGGAAA TGATGAATTT GCAACGAGAA GTCAAGAGAA GACGCCTCAG ACGAACACAA ACTGGTCCGT
GGTAGAGTGA AGATTGTACT ATGACTCTAC CGTTAAAATA TATGTACATA ATTATAAAAA CGTATTCTGT TGTAGATCGA
GGCTCTGGTA GTTTTTAGAT TAGCACTTGG AAACTTTCAC GAATTACTTA TCTTTTGAAC ACGTTAGGAA GGGTATGCAT
AGTATCATGA GAATATGTTT CAGCACACAT CCAATTTCTT GTCACCATTG GTTGGACAAT CTTGTGAAGT GGCACATTTC
CTGGATTTGA TTTGGTGAGA TTGGGTGTCC AATATATGCA CTTCTCTTCA TTCACCATAT TTTAATTACG AGATCTTCCA
TTTTATCATT TGCATATCTA AATGAGAATG AAAAGTCAGA CATCTTTTGT CAACTCTGGA GGAGATAATT AAGTAAACCA
AACCACTGTG TATTTTTCTT CCGCTTCTGG GATTCAGAAC AATTCACGTA AAAGTTGCGT ATTGTTTCTG AATTCATAAA
AGTGGTCACT ACTATTGTAC TGAAACATGG 

>Vigan.02G044900.01
GGGATTGTTA GTGTGAAGAG ACAGAAGGAC ACTTGGCGGT TGGAGCAGAG GGTTGGAGAG CGAGGAAGGA GGAACGCAGC
CAAGGAAGTG TAAACTCTCA TCAGACACCA AAATCATACC AAATCGGGAA TACCTAAGTT TTGTAAAATA AATAGCAAAG
GTATTGCTAT TGCTATTGCC CTCCATTCTT TTTATATGCT TACAAATTCT TATCTGCTTT TATTCCTCCA CTTTCTTATT
TCTATCTTTT CTATCTTTCA CTTCAAACAC TAACACGCAA CAATTCTCTT CACAATATCG TCTACTAGGG TTCAAATTCG
GATCTCAATT CATCTTATTA CTAGGATGCT ACATCTAATT ATTTCCTCCA TAATATGTAT AGATAAAATA GGTTACCGAG
ATAAAATGTA AGTGTAACAC AATCCAACTG TATCGCACTC ACTCACAATA GATTAACGCC TCTTTTGTAG TTTCATCATT
CTTGCAAGCT CTCTGCTTCT TCTTTTTTTA GGTTTTTATT TGGATGTAAA TAGTTTGTAC TTGGTTGGTA ATTCATGATT
CTCTGAATTT CCTGCTGGAA AATTAAGAAA CAGACTAGTG TTAGTTTGGT GGAAAACTGA GATTTGGATT CGGATCAGGT
TGGGATTGTG TTTGGTTGTT CATAGTTTCG ATATGAATTT CAAGAGCTTC GGGAATGAAG CTGGTGGCGA CGGAGGAGGG
AGGCCGGTGG GAAACTTCTC CCTCACGCGG CAGCCGTCGG TGTACTCGCT GACGTTCGAC GAGTTCATGA ACAGCATGGG
AGGTTCCGGG AAGGACTTTG GCTCCATGAA CATGGACGAG TTGCTCAAGA ACATTTGGAC GGCGGAGGAG GTTCAGACAA
TGACTTCGGC GGGCGTTGCC ACCGAGGACG TAGGAGCCGG CGTCAGCCAT TTGCAACGGC AGGGGTCGCT GACGCTGCCG
CGAACTCTGA GCCAGAAGAC AGTGGATGAG GTTTGGAAGG ACATTTCGAA GGATTACGGT GGGCACGGAG GGCCCAATCT
TGCACAGACG CCGAGACAGC CCACTCTGGG AGAGATGACT TTGGAGGAGT TTCTGGTCAG AGCTGGTGTT GTTAGAGAAG
ATGCGAAGCC AAACGACGGC GTTTTCATGG ATCTGGCTCG TGCGGGGAAT AACAACGGTT TGGGGTTTGG GTTCCAGCAG
ATGAACAAGG TTTCTACTGC TACCGGTTTG ATGGGTAACC GGTTGAACAA TGATCCACTG GTGGGTCTTC AGTCTTCTGC
CAATTTGCCT TTGAGTGTTA ATGGGGTGAG ATCGTCCAGT CAGCAGCCAC AGATGCAGAG TCCACAGTCT CAGCAACAGC
ATCAGCAGCA GATATTTCCT AAGCAGAGTC CTATGTCTTA TGCAGCTGCT CAGATGCCCC AGGGAATGGT TAGGGGTGGG
ATTGTGGGAC TCGGTGGTGA TCAGGGTTTG AGCATGCAAG GTGGAGGGAT TGGTAGGGTT GGTTTGGCAC CTGGGTCAGT
TCATGTTGCT ACTGGGTCTC CTGCTGCTAA CCAAATATCC GGTGATAAGA TGACCAAGAG CAATGGTGAT ACCTCGTCTG
TCTCACCGGT TCCTTATGTC TTTAACGGAG GCATGCGGGG GAGGAAGACT GGAGGAGCTG TGGAGAAGGT GATAGAGAGG
AGGCAGAGAA GGATGATAAA GAACAGAGAG TCAGCTGCCA GGTCACGGGC ACGCAAGCAG GCTTATACCA TGGAATTGGA
AGCAGAAGTT GCAAAGTTAA AAGAAGAGAA CCAAGAACTT GTGAAAAAAC AGGCTGAAAT CATGGAAATT CAGAAAAATC
AAGTTAAGGA AATGATGAAT TTGCAACGAG AAGTCAAGAG AAGACGCCTC AGACGAACAC AAACTGGTCC GTGGTAGAGT
GAAGATTGTA CTATGACTCT ACCGTTAAAA TATATGTACA TAATTATAAA AACGTATTCT GTTGTAGATC GAGGCTCTGG
TAGTTTTTAG ATTAGCACTT GGAAACTTTC ACGAATTACT TATCTTTTGA ACACGTTAGG AAGGGTATGC ATAGTATCAT
GAGAATATGT TTCAGCACAC ATCCAATTTC TTGTCACCAT TGGTTGGACA ATCTTGTGAA GTGGCACATT TCCTGGATTT
GATTTGGTGA GATTGGGTGT CCAATATATG CACTTCTCTT CATTCACCAT ATTTTAATTA CGAGATCTTC CATTTTATCA
TTTGCATATC TAAATGAGAA TGAAAAGTCA GACATCTTTT GTCAACTCTG GAGGAGATAA TTAAGTAAAC CAAACCACTG
TGTATTTTTC TTCCGCTTCT GGGATTCAGA ACAATTCACG TAAAAGTTGC GTATTGTTTC TGAATTCATA AAAGTGGTCA
CTACTATTGT ACTGAAACAT GG

>Vigan.02G044900.01
ATGAATTTCA AGAGCTTCGG GAATGAAGCT GGTGGCGACG GAGGAGGGAG GCCGGTGGGA AACTTCTCCC TCACGCGGCA
GCCGTCGGTG TACTCGCTGA CGTTCGACGA GTTCATGAAC AGCATGGGAG GTTCCGGGAA GGACTTTGGC TCCATGAACA
TGGACGAGTT GCTCAAGAAC ATTTGGACGG CGGAGGAGGT TCAGACAATG ACTTCGGCGG GCGTTGCCAC CGAGGACGTA
GGAGCCGGCG TCAGCCATTT GCAACGGCAG GGGTCGCTGA CGCTGCCGCG AACTCTGAGC CAGAAGACAG TGGATGAGGT
TTGGAAGGAC ATTTCGAAGG ATTACGGTGG GCACGGAGGG CCCAATCTTG CACAGACGCC GAGACAGCCC ACTCTGGGAG
AGATGACTTT GGAGGAGTTT CTGGTCAGAG CTGGTGTTGT TAGAGAAGAT GCGAAGCCAA ACGACGGCGT TTTCATGGAT
CTGGCTCGTG CGGGGAATAA CAACGGTTTG GGGTTTGGGT TCCAGCAGAT GAACAAGGTT TCTACTGCTA CCGGTTTGAT
GGGTAACCGG TTGAACAATG ATCCACTGGT GGGTCTTCAG TCTTCTGCCA ATTTGCCTTT GAGTGTTAAT GGGGTGAGAT
CGTCCAGTCA GCAGCCACAG ATGCAGAGTC CACAGTCTCA GCAACAGCAT CAGCAGCAGA TATTTCCTAA GCAGAGTCCT
ATGTCTTATG CAGCTGCTCA GATGCCCCAG GGAATGGTTA GGGGTGGGAT TGTGGGACTC GGTGGTGATC AGGGTTTGAG
CATGCAAGGT GGAGGGATTG GTAGGGTTGG TTTGGCACCT GGGTCAGTTC ATGTTGCTAC TGGGTCTCCT GCTGCTAACC
AAATATCCGG TGATAAGATG ACCAAGAGCA ATGGTGATAC CTCGTCTGTC TCACCGGTTC CTTATGTCTT TAACGGAGGC
ATGCGGGGGA GGAAGACTGG AGGAGCTGTG GAGAAGGTGA TAGAGAGGAG GCAGAGAAGG ATGATAAAGA ACAGAGAGTC
AGCTGCCAGG TCACGGGCAC GCAAGCAGGC TTATACCATG GAATTGGAAG CAGAAGTTGC AAAGTTAAAA GAAGAGAACC
AAGAACTTGT GAAAAAACAG GCTGAAATCA TGGAAATTCA GAAAAATCAA GTTAAGGAAA TGATGAATTT GCAACGAGAA
GTCAAGAGAA GACGCCTCAG ACGAACACAA ACTGGTCCGT GGTAG

>Vigan.02G044900.01
MNFKSFGNEA GGDGGGRPVG NFSLTRQPSV YSLTFDEFMN SMGGSGKDFG SMNMDELLKN IWTAEEVQTM TSAGVATEDV
GAGVSHLQRQ GSLTLPRTLS QKTVDEVWKD ISKDYGGHGG PNLAQTPRQP TLGEMTLEEF LVRAGVVRED AKPNDGVFMD
LARAGNNNGL GFGFQQMNKV STATGLMGNR LNNDPLVGLQ SSANLPLSVN GVRSSSQQPQ MQSPQSQQQH QQQIFPKQSP
MSYAAAQMPQ GMVRGGIVGL GGDQGLSMQG GGIGRVGLAP GSVHVATGSP AANQISGDKM TKSNGDTSSV SPVPYVFNGG
MRGRKTGGAV EKVIERRQRR MIKNRESAAR SRARKQAYTM ELEAEVAKLK EENQELVKKQ AEIMEIQKNQ VKEMMNLQRE
VKRRRLRRTQ TGPW*