GBrowse Details

Vigan.02G044600.01

Basic Information:
Name: Vigan.02G044600.01
Multiple alignment
Variant Information
Position: Chr02:3251853..3254821 (+ strand)
Length: 2969
Functional Information:
Description: Similar to Uncharacterized protein. [I1K7Z7, Glycine max]
GO: Biological Process: glycerol ether metabolic process (GO:0006662)
Biological Process: cell redox homeostasis (GO:0045454)
Molecular Function: protein disulfide oxidoreductase activity (GO:0015035)
InterPro: Thioredoxin (IPR005746)
Thioredoxin-like fold (IPR012336)
Thioredoxin domain (IPR013766)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.09,0.02,5.69,20.29,0.43,3.39,0.76,5.97
Arabidopsis thaliana homolog: AT1G07700.3
Automatic updates:
Name: NM_001364200 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max atypical Cys His-rich thioredoxin-like (LOC100809735), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:3251853..3252735 (+ strand)
Length: 883
Type: five_prime_UTR
Position: Chr02:3252736..3253191 (+ strand)
Length: 456
Type: CDS
Position: Chr02:3254053..3254106 (+ strand)
Length: 54
Type: CDS
Position: Chr02:3254433..3254561 (+ strand)
Length: 129
Type: CDS
Position: Chr02:3254562..3254821 (+ strand)
Length: 260
Type: three_prime_UTR

>Vigan.02G044600.01 class=Sequence position=Chr02:3251853..3254821 (+ strand)
CCACAATGAG TGGATATGGG GAGTGCGTGT CTTCTCCTCA TTCGACGTTT GATGTGCAGA GAGAGATATG GCAAAAGCGC
GCTTTTGGTT TCGGCAGTTC TACTGTGCCT GTTTTCTGGT AATTCACACT CTCTCTTTCC TTCATCTCTT CTCTTATCCA
TTGAACAAAA TCAAATCTCA CCCTTCTTCT CTCATTTTCC CGTGCTCTTT GTTTCTGATT CATTTCCAGT GCTTCATACC
ATTTGTTTCT TTCCTTTGCC TGAATTTGTG CTTCCTTTAT TTCGTTTATT CTGAATTCAA CTTCAAAATT AGAATTAGAG
TGAATACTTA GTTAACCCCG CTAGCAGGGT AAAAGAAAAT GCTTGAATTG CATTCAATGG TAGGTGTTGT TGTTATTCAC
AATATATTTA TATAACATGT TGTTCTCACT TTCAAATAGA ATGATCTTCC TTTTGCTGTC AAAAGCAGGG CTGAGTGGAT
GTGCAATGTC TTGGGGATTT GATTTCTGAT TGCTGCTGCT TCAGGACTCT ATCTGGCTTC CAGTTTGAAA TCCTTATACT
ATCGTCGCTA TGTCTAATCT TTGTGTTTTT ATATAAACAT CAATGTCTAT TGTATCACAA CCATTTAGAA TCATTTTCCA
TTTCCCAAAT ATAGTCCACA TTTTAGAGTT TTTTTTTTTT TTTCTGTAAC CGCTATACCT TGGGAAAGTC ATTTTCCTTA
TTGCTAATTT TATCCTTTCA CTTGATGATG CTTCTATATG GTATTGGAAT CAATTGAAAC TCAGCAACCT TTTGTATGAG
GCATCACTGC TACCGGCCAA CTTATTAAAA TTTTCTATTC CAAAATCTTG ATTACGAGCA GTGTAAGCTT TTGAATACGA
AATATGCCGC AGGTTGTCAT TCCTGGGCAG ATTAGCAAGT CCTTTGCCAG TGTTAGAATA GAGATAGAAA AATCAGTTAA
GTGTAGAACT TCCCAGGTAG TTTTCAGCTT AGTTGCTAGA GACAGGCATG GCAAACTATG TCTTGGTCAG ACAAAAGTTG
AACCTCCAGT GAAAATCAGG CACACATTAT TTTCTAGTAG GATAAGAGTT GCTGATGAAT ATAAAGATGG GTTATCTGAT
GAAGATGAAG ATCTCTGTCC CGTTGAATGT GTAAGAGAAT TCACCACTGA TGAAGAGTTC AGCAAAATTC TGGAGAAGTC
TAAAGGAACT GGATCTTTGG TGGTGGTAGA TTTCTTCCGC ACCTCTTGTG GAAGCTGCAA GTATATAGAG CAGGGTTTTG
CAAAGTTGTG CAAGAAATCT GGCGATCATG AAGCTCCGGT AATCTTTCTA AAGCATAATG TAAGTATCTG TTTCCTCCAT
ATAGCAGACA AATATTTATG TTCCTATATT CTGTACAACA GTTTTATTTA GATTAATTTT TCCATACAGT AAATATTATT
ACACTATTAA TTAATCAAAA CTATTTAATA TTTGATTTTT AAAGTAATTA TTGTAAAAGG CAACAAGTTT ATACACACGA
TAACATGTAA TTGGAAGACA GTGTCATTAA CCTCTGCACT ATCAGCGTAT GTTATATTAT TTTATTTTCC AGGTCCTATT
AAGATTTTAT TTTGAGTAAA CATTGTATAT GTGACCATTT GAATGATCTC TATTAGTGAT AATAAATATT AATATTATGT
CAAAACTCAT TAGTGATAAT TTGTAACTAG TTTATAGTGC TATGTAAAGT TCCTTACAGA CTAAAAGTGC ATAAAAGTTA
AAGTCTTTAT TTGTGATGTG TGTGTTTCCT GTCTCCCTTT TACAAACCTC TTTACAGTTT GCGGAGAAGA AATTCACGAT
CAGCTAATAT TTACATTCTC GAAAAAAAGA TTCATCATGA TTTTTAGGAG CGTAAAATAA AAAATAAATA AATAAATAAA
AAATATATAT ATAACAGTTT TATCCTAAAT TAAAATTAGT TCCTCTATAA TCTAATTATA GAAATTATTT CATATTACAT
TTTCCAAAAT TTGATTTCTA ATTTATACAT ACTAATTCTA ATTTACAAAG GAATTGGGTG TTTTTTTTTC TTCCATACAA
ATTTATCCGA CAAGAGCTTT TATCATTGTC ACTCAAACTA GAGGCTTTAT TTGATTAATT ATTAGATTGA ACATGTTAAA
AGTTCATGTA CAAAGACTCT TACTACGCTA TTGCTTGCAG GTAATGGACG AGTATGATGA GCAGTCCGAG GTTGCTGATC
GACTTAGAAT CAGGGTATAT CTCATTTATT GATTACTGAT TATCAAATGA AACTTAATCT TCATAAACTG ACATGCTAAG
CATCAACCAT GGGTTAATCT AAATGTTTGC TGTCCAACTT CTTTTCAATG TTTAGTGGTT AGTGTCTCCA TTTACACCAT
TTATCTAGTT AACTTTATTT AACTGGTGCA CAATGTCATC TTAGTTTTGG TCCTCACCTC ACTTTTATGG TTAATTCAAT
CTTCTTCCAA TCGGCAATAG ATATGTTGTG CATGATTTGT GCTACTGTGC ATTCATGCTC TATAATACGA TGAGTTTGAA
AAGGAAACGA AATGATGCAG GCCGTGCCTC TTTTCCACTT CTACAAAGAT GGCGTGCTGT TGGAAGCATT TCCAACCAGG
GACAAAGAAA GGATTGTTGC AGCCATTCTC AAGTACTCAT CTCTTGAAGC TGAAGATATC TTAGGTTAAC TTCGAATGGG
ATGGGGTCAT TGTCCCTGGG ACGGTTGTGC ACTGCAGGGA AATTAATATT TTTTTGTAAG TGACAATGTT CATTAAACAG
CATGCTGCAT ACTTACCAAA ACACTTCAGT CCTTTCCTAT CTGCTCGAAT TCACTTTGTT AGGACAGGAT ATTGCTTCCT
AAGATCTAGT GAAGAGTTTA TTGTCCACTA TGATATACAC CCTTTACTTT CGTAGAGGTT ATATATAAAT AAAGTTTTAC
TTATCTAGC

>Vigan.02G044600.01
CCACAATGAG TGGATATGGG GAGTGCGTGT CTTCTCCTCA TTCGACGTTT GATGTGCAGA GAGAGATATG GCAAAAGCGC
GCTTTTGGTT TCGGCAGTTC TACTGTGCCT GTTTTCTGGT AATTCACACT CTCTCTTTCC TTCATCTCTT CTCTTATCCA
TTGAACAAAA TCAAATCTCA CCCTTCTTCT CTCATTTTCC CGTGCTCTTT GTTTCTGATT CATTTCCAGT GCTTCATACC
ATTTGTTTCT TTCCTTTGCC TGAATTTGTG CTTCCTTTAT TTCGTTTATT CTGAATTCAA CTTCAAAATT AGAATTAGAG
TGAATACTTA GTTAACCCCG CTAGCAGGGT AAAAGAAAAT GCTTGAATTG CATTCAATGG TAGGTGTTGT TGTTATTCAC
AATATATTTA TATAACATGT TGTTCTCACT TTCAAATAGA ATGATCTTCC TTTTGCTGTC AAAAGCAGGG CTGAGTGGAT
GTGCAATGTC TTGGGGATTT GATTTCTGAT TGCTGCTGCT TCAGGACTCT ATCTGGCTTC CAGTTTGAAA TCCTTATACT
ATCGTCGCTA TGTCTAATCT TTGTGTTTTT ATATAAACAT CAATGTCTAT TGTATCACAA CCATTTAGAA TCATTTTCCA
TTTCCCAAAT ATAGTCCACA TTTTAGAGTT TTTTTTTTTT TTTCTGTAAC CGCTATACCT TGGGAAAGTC ATTTTCCTTA
TTGCTAATTT TATCCTTTCA CTTGATGATG CTTCTATATG GTATTGGAAT CAATTGAAAC TCAGCAACCT TTTGTATGAG
GCATCACTGC TACCGGCCAA CTTATTAAAA TTTTCTATTC CAAAATCTTG ATTACGAGCA GTGTAAGCTT TTGAATACGA
AATATGCCGC AGGTTGTCAT TCCTGGGCAG ATTAGCAAGT CCTTTGCCAG TGTTAGAATA GAGATAGAAA AATCAGTTAA
GTGTAGAACT TCCCAGGTAG TTTTCAGCTT AGTTGCTAGA GACAGGCATG GCAAACTATG TCTTGGTCAG ACAAAAGTTG
AACCTCCAGT GAAAATCAGG CACACATTAT TTTCTAGTAG GATAAGAGTT GCTGATGAAT ATAAAGATGG GTTATCTGAT
GAAGATGAAG ATCTCTGTCC CGTTGAATGT GTAAGAGAAT TCACCACTGA TGAAGAGTTC AGCAAAATTC TGGAGAAGTC
TAAAGGAACT GGATCTTTGG TGGTGGTAGA TTTCTTCCGC ACCTCTTGTG GAAGCTGCAA GTATATAGAG CAGGGTTTTG
CAAAGTTGTG CAAGAAATCT GGCGATCATG AAGCTCCGGT AATCTTTCTA AAGCATAATG TAATGGACGA GTATGATGAG
CAGTCCGAGG TTGCTGATCG ACTTAGAATC AGGGCCGTGC CTCTTTTCCA CTTCTACAAA GATGGCGTGC TGTTGGAAGC
ATTTCCAACC AGGGACAAAG AAAGGATTGT TGCAGCCATT CTCAAGTACT CATCTCTTGA AGCTGAAGAT ATCTTAGGTT
AACTTCGAAT GGGATGGGGT CATTGTCCCT GGGACGGTTG TGCACTGCAG GGAAATTAAT ATTTTTTTGT AAGTGACAAT
GTTCATTAAA CAGCATGCTG CATACTTACC AAAACACTTC AGTCCTTTCC TATCTGCTCG AATTCACTTT GTTAGGACAG
GATATTGCTT CCTAAGATCT AGTGAAGAGT TTATTGTCCA CTATGATATA CACCCTTTAC TTTCGTAGAG GTTATATATA
AATAAAGTTT TACTTATCTA GC

>Vigan.02G044600.01
ATGCCGCAGG TTGTCATTCC TGGGCAGATT AGCAAGTCCT TTGCCAGTGT TAGAATAGAG ATAGAAAAAT CAGTTAAGTG
TAGAACTTCC CAGGTAGTTT TCAGCTTAGT TGCTAGAGAC AGGCATGGCA AACTATGTCT TGGTCAGACA AAAGTTGAAC
CTCCAGTGAA AATCAGGCAC ACATTATTTT CTAGTAGGAT AAGAGTTGCT GATGAATATA AAGATGGGTT ATCTGATGAA
GATGAAGATC TCTGTCCCGT TGAATGTGTA AGAGAATTCA CCACTGATGA AGAGTTCAGC AAAATTCTGG AGAAGTCTAA
AGGAACTGGA TCTTTGGTGG TGGTAGATTT CTTCCGCACC TCTTGTGGAA GCTGCAAGTA TATAGAGCAG GGTTTTGCAA
AGTTGTGCAA GAAATCTGGC GATCATGAAG CTCCGGTAAT CTTTCTAAAG CATAATGTAA TGGACGAGTA TGATGAGCAG
TCCGAGGTTG CTGATCGACT TAGAATCAGG GCCGTGCCTC TTTTCCACTT CTACAAAGAT GGCGTGCTGT TGGAAGCATT
TCCAACCAGG GACAAAGAAA GGATTGTTGC AGCCATTCTC AAGTACTCAT CTCTTGAAGC TGAAGATATC TTAGGTTAA

>Vigan.02G044600.01
MPQVVIPGQI SKSFASVRIE IEKSVKCRTS QVVFSLVARD RHGKLCLGQT KVEPPVKIRH TLFSSRIRVA DEYKDGLSDE
DEDLCPVECV REFTTDEEFS KILEKSKGTG SLVVVDFFRT SCGSCKYIEQ GFAKLCKKSG DHEAPVIFLK HNVMDEYDEQ
SEVADRLRIR AVPLFHFYKD GVLLEAFPTR DKERIVAAIL KYSSLEAEDI LG*