GBrowse Details

Vigan.02G034700.01

Basic Information:
Name: Vigan.02G034700.01
Multiple alignment
Variant Information
Position: Chr02:2609929..2613617 (+ strand)
Length: 3689
Functional Information:
Description: Similar to Uncharacterized protein. [I1JT95, Glycine max]
InterPro: Bacterial transferase hexapeptide repeat (IPR001451)
Trimeric LpxA-like (IPR011004)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:26.82,22.72,22.48,13.38,33.68,21.30,21.67,15.55
Arabidopsis thaliana homolog: AT1G19580.1
Automatic updates:
Name: BT097678 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-16E20 unknown mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001254164 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100805278 (LOC100805278), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:2609929..2610038 (+ strand)
Length: 110
Type: five_prime_UTR
Position: Chr02:2610039..2610153 (+ strand)
Length: 115
Type: CDS
Position: Chr02:2610330..2610473 (+ strand)
Length: 144
Type: CDS
Position: Chr02:2610658..2610783 (+ strand)
Length: 126
Type: CDS
Position: Chr02:2610861..2611012 (+ strand)
Length: 152
Type: CDS
Position: Chr02:2612962..2613246 (+ strand)
Length: 285
Type: CDS
Position: Chr02:2613247..2613617 (+ strand)
Length: 371
Type: three_prime_UTR

>Vigan.02G034700.01 class=Sequence position=Chr02:2609929..2613617 (+ strand)
TTTTTTGTTA TAGTGATGGA AACCCCAAAA TACCCTCTCC ATGAAAGAGG GATACTCTAC TCTTCCATTT TGGTTGGGAG
TGGAAGCGTA AGCAGCGAGC AGTAGTGGAA ATGGGAACCC TTGGGAGAGC GATATACAGC GTTGGTTTCT GGATTCGCGA
GACTGGACAG GCCATCGATC GTCTCGGTTC CCGCCTTCAG GGCGGTTACT TTTTCCAAGA GCAGCGTTTG TCTCTTTCCC
CTTTTCTTTT TCTTCTTTCC CATGCCCTAA TTTCTGCCAT ATTATAATCA CGTTACATTC TATGATCATT GTTCATGATT
CCAGACTTAT GTTCTTCTTT TCCACTTAGA TTCGACCAGG CAGTGACTAA GCCAATTAAT TGTATTCCCT GTTGTGATCA
GTGTCTAGGC ATCGAACTCT GATGAACATA TTTGATAAGG CTCCTGTTGT TGATAAGGAT GTATTTGTTG CGCCAAGTGC
CTCCGTCATT GGAGACGTTC ATGTTGGAAG AGGATCATCC ATTTGGTATG GATGTGTCTT GAGAGGTAAG CTATCCCATT
GGATAATTCA TGTGTCCCAA CATTTCATGG ATATTCTTTT CTTCTCCGTC ATTTCTGAAC AGATTTCGTG TTCTGTGATC
TTTTAATGTA AATTCAACGT GACATGTTTT GCTTTTTATT CGCTGTTGAT ATATGTGTTA ATCATGTGCC AAATTTATTT
TATGAATAGG TGATGTTAAC AGCATCAGAG TTGGAAGTGG AACTAACATA CAGGATAACT CTCTGGTGCA TGTTGCAAAG
TCAAATTTAA GTGGGAAGGT CTTGCCTACA GTTATTGGGG ATAATGTTAC TGTGGGTGAG GAACAATTTT CTAACCATTA
AGAATGGTGC CGTGCTCTGT TTTTAATGGG AATTTATGTT TTTACTTAAC AGGTCATAGT GCTGTTTTAC ACGGTTGTAC
TGTTGAGGAC GAGGCTTTTG TTGGTATGGG TGCCGTATTA CTTGATGGAG TAGTTGTTGA GAAAAATGCC ATGGTTGCTG
CTGGAGCCCT TGTGAGGCAG AATACAAGGA TACCTTCTGG CGAGGTATGT CTGTATTTGT TTACTGTTTT GCTACATTAA
ATAACGAGTA TTAGGATAGT TTTTTTTGGT CATGTTAGTC TACATTTATT TTTGGGATTC ATTCCATTGT TGAGTATTAG
GTTTCGTGAA GTAATAATGT GCTTGCATAT TCAACAAAAT TTCGTGAAGT GGGCACAAGT AAATTGACGC AATAGGTCAG
AGAAAAAAAT ATTTGTTGAC ATTGTCACTT CTAAGAATTT TAATAAAAAA AGACAAATTT ATTTTAATAA AGGAGATGGT
GGAACTTGAT CCATAAGTTG TAACCTTAGA TCATTTGCAA GGTAATGATG ATATGAAGAA TTTTAGGAGT TGACATGGAG
GAGAATAAAT AACTATCACC AGTAATTTAG TCAGAAACTC CTGAATAAAA TATCCATGGA TTTTGACTAT TAGTTGATTG
AGACACTGAT AGTGGGAGCT TTAGTAGCAC AGGCTTGTTA GTGGCCTTTA ATTGAAGACA TTCTTGTATT CTGCTTCTTA
CACTCTTGCT TATCCTAACA ATAGATAGAT AATTCTAACC CACCTGTATG TGAACAGCGT GCAGCTGACA GTTGTAGACA
GTGCCAGTAA CTTGACCATT AGAGGAGATA GGCAGAGTGA GAATGAAACT GCCGTTATAC CAGGTTGTAA AATCTTGCTG
TAATGCTAGA GTGAAAAGGC AATAAACAGC ATCAATATTA ATGTACATCT CAAAATAAAT TACAATTACG AGTAATAAAA
ATTAAGGTGT AACTCCCGAA AAGCAAAGTC TCCGTCTCTT CATTATTAAT CTAAACTAGA CATTAATCTC CAACAATGAA
ACTGCTTCTA ACATAGAACC TTGGTATATA TATTAAATCG TATGCTGTTG CTTATGGAAA CAAGAATCTT AGTATAGAGG
ATGGATAATT ACCGAGTTAA TAAGTTGGGT GAATACCAAA AGAATCTGAG AAGTTTAAGG ATACGAAGGA ACCAAAGGAA
AATTAAATCT TTAACGGTCT TTTCTGATGC AAAATTATCT GTATCTTGAT TTCACTTGAA GAATAATGTA TTGCATATAC
ATGTACGATC ATGAATATTA CTACGTAAAT TACGAGGGAA GTGAGAATGA GAGCAAATTT TTATGAAATT TGAATCAAAT
CTGTAAGTTA TTACACCTGA TAAAATTTAA AACAAATCCT AACCTAATCT GATGCGCAAA TAATAGTGAA AGTGCTTGGT
CATTGTGATC ATGTTTATGA AATTCTGATG TTTCCAAAGC TCCGATACAA GTCCATTTCA TGCCATTTTT ATCTTAGCTT
TGGTTTTGTT GACTGATTGG CAAAGTTTGT GAATCCTTCG TAGGAACACC TGTATTGCAT CAACCAACCC TATCACTATG
ACACCTATCA GTTATGACCA TACCAGAAAC CTAATATCTT TTATAGGGAA TACTTGTGGT TCTTAACTCT CACCTTATCA
ACAAGCCCCA ACCCAGTACC ATATAACACT TTTCTTGAAC TATTACTTGT TACATTTGTC ATGATTCTTA CATTGCTTCT
TGAATATAGG GATAACAATT GAACCTGTCC CTAGCAAATA TCGTCTGAAC CCGTCTGATC TGAGAATCCT TGTATTAATT
GACTATGAAT GAGTATGGTT TATATCCTAT TTTTTTAAAG TTGGGTATGG AAATATCCGT CCTAATACTC ATTTTGTTCT
TATACCCGTT TTTATTTTAA ATTACTAAAA TACATTTAAT TTAGTAGTTA ATTTGAAAAC CCCTTATATA TAACTGCGTG
ATCTTGTATA CTACTGTACT ATGAGTTTTA TCATAAGTTT CAAACTACCT AAATTTTCTT TCTTGGTGAA AAGAATACGA
TTCTAGTGTT GGTTAGGCTG TTTTTTATGC ATGTTATGTG TCGTTAATGA GCTGCAGCTT GGATATTTTA CAGGTATGGG
CAGGCAATCC TGCAAAGTTC CTGAGAAAGC TAAGTAATGA GGAGATAACA TTCATCTCAC AGTCAGCCAT CAATTATACT
AACCTTGCAC AGGTCCATGC TGCTGAGAAT TCGAAGTCGT ATGATGAAAT TGAGTTTGAG AAGGTGTTGC GAAAGAAGTA
TGCTCGTAAA GATGAGGAGT ATGACTCTAT GCTGGGTGTT GTTCGCGAGA TCCCACCAGA GCTTATTCTT CCCGATAATG
TCTTACCTGA TAAAGCAGAA AAGGCTCTTC AAAAATGAGA TATTTTAAAG CATTGTCTTC AATTCTAATA TTGAATGACA
ATGGGACTTT TTTGCATTTA CAAATTCATG GAAGAGGGAT TTTTTTTTCA TTCCCAATAA TAGCAGACAT TGTCTGCGCT
AGAATCAATC GTGCCTCCTT ACGATCCAGG AAGCAGTTAT TCCTTAATAT TTTGAATTCT GTTCACTAAT TTGGTAAAGG
CAAATGCCAT GTAGAATTAT GTATGCCGAT CTTAGTGTTT GTTGTATCCA GTGCAAGTGA TTTCACATTT TTTTATCTTG
TTTATCTTTA TGTTGAAGAC ATTCTTTAGT GCTCGTTGAC ATGTTTTATT GACGAGGACA CCTACGACCG TGTTTATCTT
CAGTATGGT

>Vigan.02G034700.01
TTTTTTGTTA TAGTGATGGA AACCCCAAAA TACCCTCTCC ATGAAAGAGG GATACTCTAC TCTTCCATTT TGGTTGGGAG
TGGAAGCGTA AGCAGCGAGC AGTAGTGGAA ATGGGAACCC TTGGGAGAGC GATATACAGC GTTGGTTTCT GGATTCGCGA
GACTGGACAG GCCATCGATC GTCTCGGTTC CCGCCTTCAG GGCGGTTACT TTTTCCAAGA GCAGCTGTCT AGGCATCGAA
CTCTGATGAA CATATTTGAT AAGGCTCCTG TTGTTGATAA GGATGTATTT GTTGCGCCAA GTGCCTCCGT CATTGGAGAC
GTTCATGTTG GAAGAGGATC ATCCATTTGG TATGGATGTG TCTTGAGAGG TGATGTTAAC AGCATCAGAG TTGGAAGTGG
AACTAACATA CAGGATAACT CTCTGGTGCA TGTTGCAAAG TCAAATTTAA GTGGGAAGGT CTTGCCTACA GTTATTGGGG
ATAATGTTAC TGTGGGTCAT AGTGCTGTTT TACACGGTTG TACTGTTGAG GACGAGGCTT TTGTTGGTAT GGGTGCCGTA
TTACTTGATG GAGTAGTTGT TGAGAAAAAT GCCATGGTTG CTGCTGGAGC CCTTGTGAGG CAGAATACAA GGATACCTTC
TGGCGAGGTA TGGGCAGGCA ATCCTGCAAA GTTCCTGAGA AAGCTAAGTA ATGAGGAGAT AACATTCATC TCACAGTCAG
CCATCAATTA TACTAACCTT GCACAGGTCC ATGCTGCTGA GAATTCGAAG TCGTATGATG AAATTGAGTT TGAGAAGGTG
TTGCGAAAGA AGTATGCTCG TAAAGATGAG GAGTATGACT CTATGCTGGG TGTTGTTCGC GAGATCCCAC CAGAGCTTAT
TCTTCCCGAT AATGTCTTAC CTGATAAAGC AGAAAAGGCT CTTCAAAAAT GAGATATTTT AAAGCATTGT CTTCAATTCT
AATATTGAAT GACAATGGGA CTTTTTTGCA TTTACAAATT CATGGAAGAG GGATTTTTTT TTCATTCCCA ATAATAGCAG
ACATTGTCTG CGCTAGAATC AATCGTGCCT CCTTACGATC CAGGAAGCAG TTATTCCTTA ATATTTTGAA TTCTGTTCAC
TAATTTGGTA AAGGCAAATG CCATGTAGAA TTATGTATGC CGATCTTAGT GTTTGTTGTA TCCAGTGCAA GTGATTTCAC
ATTTTTTTAT CTTGTTTATC TTTATGTTGA AGACATTCTT TAGTGCTCGT TGACATGTTT TATTGACGAG GACACCTACG
ACCGTGTTTA TCTTCAGTAT GGT

>Vigan.02G034700.01
ATGGGAACCC TTGGGAGAGC GATATACAGC GTTGGTTTCT GGATTCGCGA GACTGGACAG GCCATCGATC GTCTCGGTTC
CCGCCTTCAG GGCGGTTACT TTTTCCAAGA GCAGCTGTCT AGGCATCGAA CTCTGATGAA CATATTTGAT AAGGCTCCTG
TTGTTGATAA GGATGTATTT GTTGCGCCAA GTGCCTCCGT CATTGGAGAC GTTCATGTTG GAAGAGGATC ATCCATTTGG
TATGGATGTG TCTTGAGAGG TGATGTTAAC AGCATCAGAG TTGGAAGTGG AACTAACATA CAGGATAACT CTCTGGTGCA
TGTTGCAAAG TCAAATTTAA GTGGGAAGGT CTTGCCTACA GTTATTGGGG ATAATGTTAC TGTGGGTCAT AGTGCTGTTT
TACACGGTTG TACTGTTGAG GACGAGGCTT TTGTTGGTAT GGGTGCCGTA TTACTTGATG GAGTAGTTGT TGAGAAAAAT
GCCATGGTTG CTGCTGGAGC CCTTGTGAGG CAGAATACAA GGATACCTTC TGGCGAGGTA TGGGCAGGCA ATCCTGCAAA
GTTCCTGAGA AAGCTAAGTA ATGAGGAGAT AACATTCATC TCACAGTCAG CCATCAATTA TACTAACCTT GCACAGGTCC
ATGCTGCTGA GAATTCGAAG TCGTATGATG AAATTGAGTT TGAGAAGGTG TTGCGAAAGA AGTATGCTCG TAAAGATGAG
GAGTATGACT CTATGCTGGG TGTTGTTCGC GAGATCCCAC CAGAGCTTAT TCTTCCCGAT AATGTCTTAC CTGATAAAGC
AGAAAAGGCT CTTCAAAAAT GA

>Vigan.02G034700.01
MGTLGRAIYS VGFWIRETGQ AIDRLGSRLQ GGYFFQEQLS RHRTLMNIFD KAPVVDKDVF VAPSASVIGD VHVGRGSSIW
YGCVLRGDVN SIRVGSGTNI QDNSLVHVAK SNLSGKVLPT VIGDNVTVGH SAVLHGCTVE DEAFVGMGAV LLDGVVVEKN
AMVAAGALVR QNTRIPSGEV WAGNPAKFLR KLSNEEITFI SQSAINYTNL AQVHAAENSK SYDEIEFEKV LRKKYARKDE
EYDSMLGVVR EIPPELILPD NVLPDKAEKA LQK*