GBrowse Details

Vigan.02G021500.01

Basic Information:
Name: Vigan.02G021500.01
Multiple alignment
Variant Information
Position: Chr02:1508974..1513855 (- strand)
Length: 4882
Functional Information:
Description: Similar to uncharacterized protein. [B8AFJ4, Oryza sativa subsp. indica]
InterPro: Protein of unknown function DUF760 (IPR008479)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:13.26,9.26,16.98,27.19,8.70,12.49,9.60,12.51
Arabidopsis thaliana homolog: AT1G63610.2
Automatic updates:
Name: NM_001253232 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100815202 (LOC100815202), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:1508974..1509478 (- strand)
Length: 505
Type: three_prime_UTR
Position: Chr02:1509479..1509640 (- strand)
Length: 162
Type: CDS
Position: Chr02:1510653..1510745 (- strand)
Length: 93
Type: CDS
Position: Chr02:1511105..1511323 (- strand)
Length: 219
Type: CDS
Position: Chr02:1512189..1512323 (- strand)
Length: 135
Type: CDS
Position: Chr02:1512843..1512923 (- strand)
Length: 81
Type: CDS
Position: Chr02:1513048..1513137 (- strand)
Length: 90
Type: CDS
Position: Chr02:1513481..1513735 (- strand)
Length: 255
Type: CDS
Position: Chr02:1513736..1513855 (- strand)
Length: 120
Type: five_prime_UTR

>Vigan.02G021500.01 class=Sequence position=Chr02:1508974..1513855 (- strand)
TGGAAAATCA CGTGTGAGCC TCATCCCTGG GAATTAGGAA GCAGAAGAAT GGGACTCCAC AGTTGCAATA TGAAACCTTT
CTCTCTGTGA AACCAGAAAC AGATTATTTA ACCTTTAATC ATGTATTCCT TCACTGTGAA ACCCTTTTTC GTACCTCAAT
TTATTTCTTC TTCTTCTTCT TCTTCAACTT CTACTTCCTC CTCTTCAATT TCTCTCGCCT CCTTCTCATC TCGTTCTCTC
TCATCAATTA GCTTTTCCAG AAATTCAAAG CACAGAGGAA GGTTTGGTCT GAAAGTTGAA GCTTATGATT CCTCCAACAA
CGACGCTTCT AAACCTTCAA GTGCTGGCGA TTCCAAACCC CCTAATGGCA CTTTGGTACT GCTTCTCCTT CTTCTTCATT
TTCTATTAAT AAAAGTTAGA CTTTTAATGG TATATTTTAT CATTTTAACA GAAAAAAGTA TTTTATTAAT TGTGAATGAA
AACCTCTTAC AATAGGTTAG TGTGATCTTG GATCAGTGAA TGAATATTTA TAATCTTTAA ACTCTTCCCT GAAATCTCAA
GTTTCTTCAG CATTATATGC CCTGGCCCGA GTGACTATTT TGATGGATAT GAAATTAAAA TAGGATCTGC TGTCAAAATA
ATTTTTTTTC TGTGAATAAG TATCCACTTC TGTCTGGTAA GTTATCCAAG CTGTGATTTA ATGTTTTGAG TTCACCAGTC
AAAGAGCAGG AGAGAAATTT TACTGGAATA TGTCAAGAAC GTGCAGCCAG AATTTATGGA ATTGTTTGTG AAAAGAGCGC
CTCAACAGGT ATGAGGATGT CTTGTTTATG AACAGTTTAT CTGACTTTTG ATTGATTGCA GCGGAAAGAT GGCTGCTTTT
TTTTTCCTTG CCATGTCCTC TTAGTGTGAA TGAAACTTAT TTTGGTGATT AGGTTGTGGA TGCAATGCGC CAAACAGTGA
CAAATATGAT TGGAACACTG CCCCCTCAAT TTTTTGCTGT AACAATTACC ACTGTAAGAT GCAATGATTT TTTTTTCTCC
TCTTGCTTAA ATTTAACTAT CATTTTTAGT GAGCAATTTT GCAAGCTATG ATGTTTGTAT TTGGATGGAT AGTCAACTTG
TAAGTTTCTT TGATGAAACT TTGTTTAGAG GGGATACCTT ACTTTGTTTG GTTTATTTGT CCCTGAAATC TGTTTCTGCA
ATGACTATCC CCATTTATTT CATGTCACAT ATTAAAATTG GAAGTGTACT TATTTTACCT TTGCTGCCAT TTTTATTTCC
TTTGTTTGTT AATATTTACT ATTTGTGTTG TTAGTCCCAA TCTCAAAGCT TTTTATAAAT TCTTGCCCAA AGAGAAATTG
CCTGAATGAA TTAATTGAAA ATATTCTGGT CTTGGAAGAA TAACATGTTT TAACCACAAA ATGGTTAAAT TGGCAGAGAA
ATGTTGAGCC ATGCGGCTGG ATTGAATTGC AGTTCTTCTT CTTTTTTGCG TGATCTTACG TGTTTCTGTG GAATCATTTG
GCTATTTATT AGGTAGCTGA AAATCTTGCA CAGCTCATGT ACAGTGTCAT AATGACTGGA TACATGTTCA GGAATGCACA
ATACCGTTTG GAGTTGCAAG AAAGTTTGGA ACAAGTTGCT GCCCTGCCAG ATGTGCAAGA TAAAAAGGTA ATACTGTTTC
TCTTTCTTCT CTTTTAGCAT TCTGTATCTG TTTCAAAAAA TAATTAAATG CTTGGACAAG TGAAAGGATG TCACATATTC
AATTTGGTGG ACAGAAGATT CATTTCCTAT CCTTATTAGT CTTTCTTATT TAGACTCCAG TCCAGCTTAC ACAAATGAAA
AATGGCTTCT TTAATTTAAC CAGGTGTTGA CTAGTAGAAG AAGAGCTTGT TATTGGGTGA AGGAGAATAT AATAGTTTCT
TCTTCTTGTT TCTCTCTTCC TCTGTATATT CAATATGGTT TCAAGAGCAT AACATCTTGG TTCTTTGGTC ATGGTGGATT
CTTCTTCATC CCTCTGCCAC ACTCTGTTTC TGCTTCAGTG GTTCCTTCAC TCTCACCAGT CACTCTTCTC ATTCCATTGC
AGAGAAACTC AATTAAGATA ATTTTCTGCT TTGGAGAGAA CGAATTCAAC TTGTGATAAA AGGTCATTAT CTTGCATGAC
CAAATCTGGA TCTGTTAATC CTTCATATCT AACCTGGGAA CAACATTATC AATTACTCTT CTTGTGACTT CAGTCTACTT
TAACAAGTAG TATGCTCATG CAAATCATTG GTTGCGTTCT TTGTTGGGAA CTTTGGGGGA AACTGATGCA CATATGCAAG
TTAAAGCAAA TCAACTGCAC ACTGAATTAC ATAGTACAAT TCCTGAAGGA AAAACCATGA CTGAATTATT GGCTTGTGTG
AAAACACTAG TTGCTTTGAT TACTAAATAG CCATAGTGTT TCCTTTAGGT ACCACATTAT TATTGCACTA AGCAAATTCG
AATAATAATT TAGTTTGTAC TTTCTTTAAT TTATGCTCTT AAAACATTGC AGGATGTGTC AGATTATGCC CCTGGCACAC
AAAAAAATGT TTCAGGTGAA GTTATTCGGT GGAATAATGT TTCTGGGGCT GAGAAAATAG ATGCTAAAAA GTACATTGAA
TTACTTGAAG CGGAGATTGA GGAGCTGAAT CGTCAAGTTG GAAGACAATC TAGCAATGCA CAAAATGAAC TATTAGAATA
CCTAAAATCT CTCGAGCCTC GAAATTTGAA GGTTAACTCA ACTTTTCATT GGTCAATATA ACTCGTTCAT CCAGCTGTTT
TGTGCTGTCT GCTAAGTATA AGTTTTCACA TGTTGAGCTG TACTGTACCT TTTATTTAGA ATTTATACTT AATCAGTATT
GAACAGTCTG GTATTGCATT TTTTTTCATA ACTAGGTATT GGTTTGATGT TGATATATTC ATCTCAATTA TAAACCCGCT
TCCACTGCTG TAGATTTACT TACTGATTGT GATATTTGCT TCTGTATCTA TTGACATTCC CATGCAGATT ATTAAACTTA
ACCAAAATAA GTATCTTTGA TTCTCTGCAG TCAACTTTTT GCCTTAATAA CCCTTCATTT CATTTTGTAG GAGTTGACTA
GCAGTGCTGG TGAGGATGTA GTGTTTGCTA TGAATACGTT TATAAAGCGA TTGCTGGCTG TTTCAGATCC TAGCCAAATG
AAGGTTTACT TCTGCATTAT TTTGATCTCC TTTGTTTTCA TTTTATATTC ATCATTAATG TAAATTTTGT TCTCTTGTCA
TCTTTCAAAA TGGTCTAACA TTTTCAGATT ACAGTCACTG TATTTATGTC TGTTCGAAAA ACTGAACTGA TTTGAATTGT
GTAAAGAAAA AATAATTGTT CTATTAATTT GCTTATTTAA ATTGAATTGC TCTTAAATAA AACTGCTTGA ACTAAACTGA
ATTTTAACTT AAAATATTGG AAAATAAGCT TCAAAATAGG ATGTTTATTA TAATAATTCA AACTATTCAT ATGGTTTAAG
CAATTTAGAT TAGTTAAATT TAGTTAAACC ATGATGTAGT TAAGTTCAAT TCCTTTAAAT CATTATACAA TTCAATTTAG
TTCAGTCAAA TCACTTTTTA AAGTTCAGTT TAGTTTTACA ATAGTTGAGT TCGAATCATG CATTTTGCCT ATCCCTATCA
CTCTATCCAC CATTATTATC TGGGTCAATA TTGAATGCTT TTGTTTTTGT GTGATTAATT TATTTTTAGG ATACGTATTA
AGTTTTAACA TGGAAGATGG AACTTATTTT TGTTTCTGTT TGTAAAATTG AAGTCCTAGT ATTACTTGAA TAGAAAGTTG
CTCAAAAAAG CATATTTGAT AAATACTTCC GTAATCCTTG TTGTGGTGAT GATATATTAT CTATTACTTC AAATAATAGT
TTCTTTGCCT TTTTTGAGTT ATGACTTGAA TGATTGAACT TGAAATGTGC TCTTTAACTG TGTGAACAAC AAGTTGCATG
GAGGCAAAAT TTCCCTATTT TTGAATAATA ATTTTGTCAC GTAAATTGGT GGTGGTTTTG TTTGTATAAA CTGAGGCAAC
CAAAAACTAG AATTTTTCAA ATTGATTTAA GTTCTGTCTG AGTATTGTGA CAGTGAATAA CCTTCTCTAT GCTTATTACT
GTGAACAATG TCATTCAAGA CTTTTGAATT AGTTGTTTTA ATTATGATTT TTCAGACTAG CGTGACGGAG ACCAGTGCAG
CTGAACTTGC TAAGCTGCTT TATTGGTTGA TGGTGGTTGG GTACAGCATT CGCAATATTG AAGTTCGTTT TGATATGGAA
AGAGTACTTG GCACTTCTCC AAAGCTGGCT GAATTGCCAC CAGGTGAAAA TGTTTAAACA ATCTTGAATA AACTAGGTCA
TTGAAGTGCT AATGTCCACA AGTTCTAAGT GGCCTATTTA GATTTTGCAC TTTTTTGGTT GATTGGCTGA ATGAATGGCC
ACGACCTAAA AGAGAAGTCT GCATTTTTCA GCGGCCTTTG AATGATTGGT CTCCTGATAG ATTATTTAAT ATATCTGATG
GACATCATTT TTTCTCTGGG TACTATGAAA ACTCTTATTC GCAATCATCT GACAACGATA TCAGGGTTGA TTTCCCTGAA
GATGTGCTAT GCCTCTATTT TTATGTTACT TCTTTGACTG TCTGAACCCT GGTGATTCTT TATAAAGGCA GCAGTGATCT
TGGTCCCCTT TTCAGCGTTT CTATATTCTT CGCCAGAATG CATCAACATA TATTCTTTTT GTTATGTACG GTGAGCTGAG
TTATTCTTCC TAGATTTATT TTAAATTGTT ATATTTTCTA ATTTCATATT TTAATCTTGT TATTCTTTTA ATTTCTAGTT
CA

>Vigan.02G021500.01
TGGAAAATCA CGTGTGAGCC TCATCCCTGG GAATTAGGAA GCAGAAGAAT GGGACTCCAC AGTTGCAATA TGAAACCTTT
CTCTCTGTGA AACCAGAAAC AGATTATTTA ACCTTTAATC ATGTATTCCT TCACTGTGAA ACCCTTTTTC GTACCTCAAT
TTATTTCTTC TTCTTCTTCT TCTTCAACTT CTACTTCCTC CTCTTCAATT TCTCTCGCCT CCTTCTCATC TCGTTCTCTC
TCATCAATTA GCTTTTCCAG AAATTCAAAG CACAGAGGAA GGTTTGGTCT GAAAGTTGAA GCTTATGATT CCTCCAACAA
CGACGCTTCT AAACCTTCAA GTGCTGGCGA TTCCAAACCC CCTAATGGCA CTTTGTCAAA GAGCAGGAGA GAAATTTTAC
TGGAATATGT CAAGAACGTG CAGCCAGAAT TTATGGAATT GTTTGTGAAA AGAGCGCCTC AACAGGTTGT GGATGCAATG
CGCCAAACAG TGACAAATAT GATTGGAACA CTGCCCCCTC AATTTTTTGC TGTAACAATT ACCACTGTAG CTGAAAATCT
TGCACAGCTC ATGTACAGTG TCATAATGAC TGGATACATG TTCAGGAATG CACAATACCG TTTGGAGTTG CAAGAAAGTT
TGGAACAAGT TGCTGCCCTG CCAGATGTGC AAGATAAAAA GGATGTGTCA GATTATGCCC CTGGCACACA AAAAAATGTT
TCAGGTGAAG TTATTCGGTG GAATAATGTT TCTGGGGCTG AGAAAATAGA TGCTAAAAAG TACATTGAAT TACTTGAAGC
GGAGATTGAG GAGCTGAATC GTCAAGTTGG AAGACAATCT AGCAATGCAC AAAATGAACT ATTAGAATAC CTAAAATCTC
TCGAGCCTCG AAATTTGAAG GAGTTGACTA GCAGTGCTGG TGAGGATGTA GTGTTTGCTA TGAATACGTT TATAAAGCGA
TTGCTGGCTG TTTCAGATCC TAGCCAAATG AAGACTAGCG TGACGGAGAC CAGTGCAGCT GAACTTGCTA AGCTGCTTTA
TTGGTTGATG GTGGTTGGGT ACAGCATTCG CAATATTGAA GTTCGTTTTG ATATGGAAAG AGTACTTGGC ACTTCTCCAA
AGCTGGCTGA ATTGCCACCA GGTGAAAATG TTTAAACAAT CTTGAATAAA CTAGGTCATT GAAGTGCTAA TGTCCACAAG
TTCTAAGTGG CCTATTTAGA TTTTGCACTT TTTTGGTTGA TTGGCTGAAT GAATGGCCAC GACCTAAAAG AGAAGTCTGC
ATTTTTCAGC GGCCTTTGAA TGATTGGTCT CCTGATAGAT TATTTAATAT ATCTGATGGA CATCATTTTT TCTCTGGGTA
CTATGAAAAC TCTTATTCGC AATCATCTGA CAACGATATC AGGGTTGATT TCCCTGAAGA TGTGCTATGC CTCTATTTTT
ATGTTACTTC TTTGACTGTC TGAACCCTGG TGATTCTTTA TAAAGGCAGC AGTGATCTTG GTCCCCTTTT CAGCGTTTCT
ATATTCTTCG CCAGAATGCA TCAACATATA TTCTTTTTGT TATGTACGGT GAGCTGAGTT ATTCTTCCTA GATTTATTTT
AAATTGTTAT ATTTTCTAAT TTCATATTTT AATCTTGTTA TTCTTTTAAT TTCTAGTTCA 

>Vigan.02G021500.01
ATGTATTCCT TCACTGTGAA ACCCTTTTTC GTACCTCAAT TTATTTCTTC TTCTTCTTCT TCTTCAACTT CTACTTCCTC
CTCTTCAATT TCTCTCGCCT CCTTCTCATC TCGTTCTCTC TCATCAATTA GCTTTTCCAG AAATTCAAAG CACAGAGGAA
GGTTTGGTCT GAAAGTTGAA GCTTATGATT CCTCCAACAA CGACGCTTCT AAACCTTCAA GTGCTGGCGA TTCCAAACCC
CCTAATGGCA CTTTGTCAAA GAGCAGGAGA GAAATTTTAC TGGAATATGT CAAGAACGTG CAGCCAGAAT TTATGGAATT
GTTTGTGAAA AGAGCGCCTC AACAGGTTGT GGATGCAATG CGCCAAACAG TGACAAATAT GATTGGAACA CTGCCCCCTC
AATTTTTTGC TGTAACAATT ACCACTGTAG CTGAAAATCT TGCACAGCTC ATGTACAGTG TCATAATGAC TGGATACATG
TTCAGGAATG CACAATACCG TTTGGAGTTG CAAGAAAGTT TGGAACAAGT TGCTGCCCTG CCAGATGTGC AAGATAAAAA
GGATGTGTCA GATTATGCCC CTGGCACACA AAAAAATGTT TCAGGTGAAG TTATTCGGTG GAATAATGTT TCTGGGGCTG
AGAAAATAGA TGCTAAAAAG TACATTGAAT TACTTGAAGC GGAGATTGAG GAGCTGAATC GTCAAGTTGG AAGACAATCT
AGCAATGCAC AAAATGAACT ATTAGAATAC CTAAAATCTC TCGAGCCTCG AAATTTGAAG GAGTTGACTA GCAGTGCTGG
TGAGGATGTA GTGTTTGCTA TGAATACGTT TATAAAGCGA TTGCTGGCTG TTTCAGATCC TAGCCAAATG AAGACTAGCG
TGACGGAGAC CAGTGCAGCT GAACTTGCTA AGCTGCTTTA TTGGTTGATG GTGGTTGGGT ACAGCATTCG CAATATTGAA
GTTCGTTTTG ATATGGAAAG AGTACTTGGC ACTTCTCCAA AGCTGGCTGA ATTGCCACCA GGTGAAAATG TTTAA

>Vigan.02G021500.01
MYSFTVKPFF VPQFISSSSS SSTSTSSSSI SLASFSSRSL SSISFSRNSK HRGRFGLKVE AYDSSNNDAS KPSSAGDSKP
PNGTLSKSRR EILLEYVKNV QPEFMELFVK RAPQQVVDAM RQTVTNMIGT LPPQFFAVTI TTVAENLAQL MYSVIMTGYM
FRNAQYRLEL QESLEQVAAL PDVQDKKDVS DYAPGTQKNV SGEVIRWNNV SGAEKIDAKK YIELLEAEIE ELNRQVGRQS
SNAQNELLEY LKSLEPRNLK ELTSSAGEDV VFAMNTFIKR LLAVSDPSQM KTSVTETSAA ELAKLLYWLM VVGYSIRNIE
VRFDMERVLG TSPKLAELPP GENV*