GBrowse Details

Vigan.01G475400.01

Basic Information:
Name: Vigan.01G475400.01
Multiple alignment
Variant Information
Position: Chr01:60448907..60450748 (- strand)
Length: 1842
Functional Information:
Description: Similar to Uncharacterized protein. [I1LVT6, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.11,0.02,0.02,22.48,0.10,6.78,0.11
Arabidopsis thaliana homolog: AT5G57620.1
Automatic updates:
Name: DQ822971 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB71 (MYB71) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:60448907..60449219 (- strand)
Length: 313
Type: three_prime_UTR
Position: Chr01:60449220..60450039 (- strand)
Length: 820
Type: CDS
Position: Chr01:60450214..60450343 (- strand)
Length: 130
Type: CDS
Position: Chr01:60450435..60450570 (- strand)
Length: 136
Type: CDS
Position: Chr01:60450571..60450748 (- strand)
Length: 178
Type: five_prime_UTR

>Vigan.01G475400.01 class=Sequence position=Chr01:60448907..60450748 (- strand)
GTGAGGTGTG TAAGACTTTT TGTCCTTTTA AGAATCACAT CAGCCATACT TGGCTACCTA TAAATCACAA CCTTCCTTCG
CCGTAGTTTC CCAACAATCC TAGCTAGCAA AGTTGATATT TGCTTCAACA AAAAACATAA AGAGAAACCT AATTGGAGAG
AGACAACAAC ACAACAACAT GGGTAGAGCT CCATGCTGTG ACAAGGCCAA CGTCAAGAAA GGACCATGGT CTCCTGAAGA
GGATGCTGCA CTTAAGGCCT ACATTGAAAA GAACGGAACT GGTGGCAATT GGATTGCTCT TCCTCAGAAA ATTGGTACAC
TCCTTTCTTA TATGTTTATT TATTTTCTAT TGAGAGTTTT ATGAGACCAA GAGAGATCTT ATTGATGGAT ACAAATAATT
CCCAGGGCTC AAGAGATGTG GAAAGAGTTG CAGACTTAGG TGGTTAAATT ACTTGAGACC TAATATCAAA CATGGTGGAT
TTACTGAAGA AGAAGACAAC ATCATCTGCA ATCTTTACAT TAGCATTGGT AGCAGGTCAT TCTCTCTCTC AAAAACCCCA
ATCTCTATCT TCGCGCCTGT GCTGTTGTTT CTCGACATAA CTGTTTGTCC TTTTTCTTTG TCACTAGAAT ATGTCTAGCT
ACCTCCACAT GTTATTTCTT TGGTTGTTCC TAGAAATTAA CCGAACATGT TCCAACATAA TCTGTATAGG TGGTCCATAA
TTGCTGCTCA GTTACCTGGA AGGACAGATA ACGACATCAA GAACTATTGG AACACTAGAT TGAAGAAGAA ACTGCTTGGG
AGGCGCAAAC AATCTAACTT CAACACAAAG GACACAAATA ATGGAATAGA GGAGAACTCT TATTCAAATG CCCTAAGCAG
CTCAGCCCTT GAAAGACTCC AACTGCACAT GCAACTTCAA AGCCTTCAAA ACCCTTTCTC TTTCTACAAT AACCCTGCGT
TGTGGCCTAA GTTGCATCCT TTCCAAGAAA AGATGATCCA GAGCCTGCAA TCTTTGAATG ACGGCTCTAA CCCTGTGGTG
CAAGATGCTT TGCCTACCCC CCATGTCGAA CAAGGACAAA AAGATGAGTT CATCTACAAG CCTCAACATG ATGGTGCAAA
GATCCATAGC CCACAGGTTC ATCTTCTGGA GAATATTCCT TCAAGTAACA GTGGAGTTCC CTTTGTTGCT TCTGAGAGCA
ATAATAATCC AATGCACTCA AGTCTTGCAC CAAGAGCTGA GGCTGTTGAA CAGACTAATA ATGTGGGATT TCAGCAACTC
GGTGCACTGC AAACTGAACT AGATGACATT CTGAACAACA GAACAATGGG TTACGTGCCT CAGGAAGATC ATCAGATGGC
TGAATTTGAT TGTTTCAGAG AGATGAATGG CTCCAAGGAC AGCCTGATTT GGTGGTCCAA TGATTCTGAT ACCAGATCAG
CATCCTCAAA TTCCTGGGAT TCATCTGCTA CTCCAGCTCT TTTAACACAA GGGATGTTCC AAGATTATGA ACTGGGTTAC
AGTCTGTAGT GATTACAAGG ATATAACTTT CTGGTTATGC TAATTTGTTG TGTTAGTCAT AAGATGTGGA ACGAGGAGCA
TGAGTAGTAG CAGGTCTTGT AAACAACATC GTGAATATAA TAATGTAAAT CCGATCAATG TCTGAGTAAT GTAGAAACTA
CTAGTTTGTT CTGAACAATA ACCAACGTGG TCCTTGATAT ATATATTTCT TAAACTTTAA AACATTGTTC CATAATTAGT
TTGATGCTAA CTGAGATTCT AATGCATTTG ATCCCATGTC CTTTGACTCT GCCAGAGTAT AACAAGAATT TCACTGTACT
TG

>Vigan.01G475400.01
GTGAGGTGTG TAAGACTTTT TGTCCTTTTA AGAATCACAT CAGCCATACT TGGCTACCTA TAAATCACAA CCTTCCTTCG
CCGTAGTTTC CCAACAATCC TAGCTAGCAA AGTTGATATT TGCTTCAACA AAAAACATAA AGAGAAACCT AATTGGAGAG
AGACAACAAC ACAACAACAT GGGTAGAGCT CCATGCTGTG ACAAGGCCAA CGTCAAGAAA GGACCATGGT CTCCTGAAGA
GGATGCTGCA CTTAAGGCCT ACATTGAAAA GAACGGAACT GGTGGCAATT GGATTGCTCT TCCTCAGAAA ATTGGGCTCA
AGAGATGTGG AAAGAGTTGC AGACTTAGGT GGTTAAATTA CTTGAGACCT AATATCAAAC ATGGTGGATT TACTGAAGAA
GAAGACAACA TCATCTGCAA TCTTTACATT AGCATTGGTA GCAGGTGGTC CATAATTGCT GCTCAGTTAC CTGGAAGGAC
AGATAACGAC ATCAAGAACT ATTGGAACAC TAGATTGAAG AAGAAACTGC TTGGGAGGCG CAAACAATCT AACTTCAACA
CAAAGGACAC AAATAATGGA ATAGAGGAGA ACTCTTATTC AAATGCCCTA AGCAGCTCAG CCCTTGAAAG ACTCCAACTG
CACATGCAAC TTCAAAGCCT TCAAAACCCT TTCTCTTTCT ACAATAACCC TGCGTTGTGG CCTAAGTTGC ATCCTTTCCA
AGAAAAGATG ATCCAGAGCC TGCAATCTTT GAATGACGGC TCTAACCCTG TGGTGCAAGA TGCTTTGCCT ACCCCCCATG
TCGAACAAGG ACAAAAAGAT GAGTTCATCT ACAAGCCTCA ACATGATGGT GCAAAGATCC ATAGCCCACA GGTTCATCTT
CTGGAGAATA TTCCTTCAAG TAACAGTGGA GTTCCCTTTG TTGCTTCTGA GAGCAATAAT AATCCAATGC ACTCAAGTCT
TGCACCAAGA GCTGAGGCTG TTGAACAGAC TAATAATGTG GGATTTCAGC AACTCGGTGC ACTGCAAACT GAACTAGATG
ACATTCTGAA CAACAGAACA ATGGGTTACG TGCCTCAGGA AGATCATCAG ATGGCTGAAT TTGATTGTTT CAGAGAGATG
AATGGCTCCA AGGACAGCCT GATTTGGTGG TCCAATGATT CTGATACCAG ATCAGCATCC TCAAATTCCT GGGATTCATC
TGCTACTCCA GCTCTTTTAA CACAAGGGAT GTTCCAAGAT TATGAACTGG GTTACAGTCT GTAGTGATTA CAAGGATATA
ACTTTCTGGT TATGCTAATT TGTTGTGTTA GTCATAAGAT GTGGAACGAG GAGCATGAGT AGTAGCAGGT CTTGTAAACA
ACATCGTGAA TATAATAATG TAAATCCGAT CAATGTCTGA GTAATGTAGA AACTACTAGT TTGTTCTGAA CAATAACCAA
CGTGGTCCTT GATATATATA TTTCTTAAAC TTTAAAACAT TGTTCCATAA TTAGTTTGAT GCTAACTGAG ATTCTAATGC
ATTTGATCCC ATGTCCTTTG ACTCTGCCAG AGTATAACAA GAATTTCACT GTACTTG

>Vigan.01G475400.01
ATGGGTAGAG CTCCATGCTG TGACAAGGCC AACGTCAAGA AAGGACCATG GTCTCCTGAA GAGGATGCTG CACTTAAGGC
CTACATTGAA AAGAACGGAA CTGGTGGCAA TTGGATTGCT CTTCCTCAGA AAATTGGGCT CAAGAGATGT GGAAAGAGTT
GCAGACTTAG GTGGTTAAAT TACTTGAGAC CTAATATCAA ACATGGTGGA TTTACTGAAG AAGAAGACAA CATCATCTGC
AATCTTTACA TTAGCATTGG TAGCAGGTGG TCCATAATTG CTGCTCAGTT ACCTGGAAGG ACAGATAACG ACATCAAGAA
CTATTGGAAC ACTAGATTGA AGAAGAAACT GCTTGGGAGG CGCAAACAAT CTAACTTCAA CACAAAGGAC ACAAATAATG
GAATAGAGGA GAACTCTTAT TCAAATGCCC TAAGCAGCTC AGCCCTTGAA AGACTCCAAC TGCACATGCA ACTTCAAAGC
CTTCAAAACC CTTTCTCTTT CTACAATAAC CCTGCGTTGT GGCCTAAGTT GCATCCTTTC CAAGAAAAGA TGATCCAGAG
CCTGCAATCT TTGAATGACG GCTCTAACCC TGTGGTGCAA GATGCTTTGC CTACCCCCCA TGTCGAACAA GGACAAAAAG
ATGAGTTCAT CTACAAGCCT CAACATGATG GTGCAAAGAT CCATAGCCCA CAGGTTCATC TTCTGGAGAA TATTCCTTCA
AGTAACAGTG GAGTTCCCTT TGTTGCTTCT GAGAGCAATA ATAATCCAAT GCACTCAAGT CTTGCACCAA GAGCTGAGGC
TGTTGAACAG ACTAATAATG TGGGATTTCA GCAACTCGGT GCACTGCAAA CTGAACTAGA TGACATTCTG AACAACAGAA
CAATGGGTTA CGTGCCTCAG GAAGATCATC AGATGGCTGA ATTTGATTGT TTCAGAGAGA TGAATGGCTC CAAGGACAGC
CTGATTTGGT GGTCCAATGA TTCTGATACC AGATCAGCAT CCTCAAATTC CTGGGATTCA TCTGCTACTC CAGCTCTTTT
AACACAAGGG ATGTTCCAAG ATTATGAACT GGGTTACAGT CTGTAG

>Vigan.01G475400.01
MGRAPCCDKA NVKKGPWSPE EDAALKAYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FTEEEDNIIC
NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR RKQSNFNTKD TNNGIEENSY SNALSSSALE RLQLHMQLQS
LQNPFSFYNN PALWPKLHPF QEKMIQSLQS LNDGSNPVVQ DALPTPHVEQ GQKDEFIYKP QHDGAKIHSP QVHLLENIPS
SNSGVPFVAS ESNNNPMHSS LAPRAEAVEQ TNNVGFQQLG ALQTELDDIL NNRTMGYVPQ EDHQMAEFDC FREMNGSKDS
LIWWSNDSDT RSASSNSWDS SATPALLTQG MFQDYELGYS L*