GBrowse Details

Vigan.01G354800.01

Basic Information:
Name: Vigan.01G354800.01
Multiple alignment
Variant Information
Position: Chr01:48943614..48945506 (- strand)
Length: 1893
Functional Information:
Description: Similar to lysine-rich arabinogalactan protein 18-like. [XP_004509089.1, Cicer arietinum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.30,3.40,187.72,68.88,290.51,341.53,164.83,235.41
Automatic updates:
Name: AB035291 NCBI(nuccore)
Organism: Vigna angularis
Description: Vigna angularis GAUR3 mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:48943614..48944333 (- strand)
Length: 720
Type: three_prime_UTR
Position: Chr01:48944334..48944417 (- strand)
Length: 84
Type: CDS
Position: Chr01:48944836..48945411 (- strand)
Length: 576
Type: CDS
Position: Chr01:48945412..48945506 (- strand)
Length: 95
Type: five_prime_UTR

>Vigan.01G354800.01 class=Sequence position=Chr01:48943614..48945506 (- strand)
TCTCTCTCTC TCTCTCTCTC TATCTCTCTC TCTCTCTCTC TATCTCTTAA GACACACACA CACGCACTCA CTCTTCACAA
CTGCGATTCA CGCCAATGGA TCGCAACAGT GTCTTCTCTC TCGCGTTCAT CTGCATTGTA ATAGCCGGCG TTGGAGGCCA
GTCTCCGGCG TCAGCGCCGT CGAGCACACC GGCAACTCCC GCCGCTTCCA CTCCTGCGGC AGCCCCTATC ACACCAAAAT
CACCTGCTCC CGTTGCTTCC CCCAAATCCT CTCCTCCCGC AGCATCACCT AAGGCCGCAA CCCCCGCATC GACGCCGGCG
GCATCTCCTC CAACCGCTAC AGCTCCTGCC CCTGCGACCA AGCCTCCGGC AGCGTCTCCT CCGGCTGCAA CTCCAGTGAG
CTCCCCACCG GCTCCAGTTC CAGTGAGCTC TCCCCCAGCT CCGGTTCCGG TGAGTTCTCC CCCTGCACCT GTGCCGACAG
TTGCTCCCGT AGTGGCGCCC ACCACCCCTG TGACTCCGGC TCCGGCTCCG GGAAAGCACA AGAAGACTAA GAAGCACAGT
GCTCCGGCAC CCTCACCGTC GTTGCTTGGT CCCCCTGCTC CACCCACAGG TGCTCCTGGT CCCAGCGAAG ATGCTACTTC
CCCTGGACCT GCATCTTCTG CCAACGATGA GGTATGTTTT ATGTCTTCCG TGTTCTTTCA ACGCTGATTT TGTACAATGT
GCATCAGATC TGTGGATATA AGTCGAATAT TGTCCGGTTA CAACACCAAA ACAGTGGATA TAAAAGAAAG ATAAACCTTA
TCTCTTGAAT CAAAGCTCTG TTGTTATGTT CGTACAGATA CTAGTTCTAT AACATTTTTG AACTTAACTC TTGTTAGGGT
TTGACAGTTT TACTACCTTA AAACTAAAAG TGAACTCAGA TGTAAGGCTT GTATGGTGTG CACGCGCCAC CATTAACCTG
TGTATTTTAT TAGGGTAACC TGTTATACAT TTCCTTTGCA ACAGTTGAGT AAATCTAGGA TTTACAAACT GTGAATATTT
TAACATTATT AACAGTGGGA TCTGACATAT TTTTGCTTTA TATTTTCAGA GTGGAGCAGA GACCATCATG TGCTTGAAGA
AGATTCTAGG AGGCTTAGCT TTGGGCTGGG CTACCCTTGT TTTGGTCTTC TAGACAGACT TTGTTACTGT TATTATATTC
TTGTATTGTA TCATTTATTT CCTTTTTTTT AATTTTTCCT TTTCTTTCTC ACCCTGTTTT GGGTACACAT TACATTTATT
TACATTGTTA CTTGGGACTC TATTATTCGA TTGATGTCGT TGTCATTACT GCTGCGTGCT TTTCTTTTAG TAGTGGTGAA
TCGCCGGATT CTTTACCTGT CTTTCAATTT TCCGGTAGAA TAGGAATTAC AATCTTTAGA GCTAATCTTA AGCCATTACA
ACAGGATTCA AATTAAGCAT TCTTAAAACT TTCCATATAA ATTAAAACTA TTATTTTTAT TTTTAATTGT TCTTCTTTGA
AATTTGAACC ATACGTTTGG GTTACCACTT TTACCATTAA TACCATTAAT AGTTAACCGT GTCTGTGTCT GAGTGATAAT
GAAGACAGTA AAGGAATAAG GTAGAAGAAA ACAAGGAAAA CAAGGAATTC ATATTTCCCT TTTTCTTTGC TTCTACTCAA
CCAAACGCGT GTCAATGGTC CATTGCTTAT TGAATTCGTC ATTGCCATTG ACTGGTTGGA TGAAATGGTA GAACCATATC
ATAACTATTG CACTGGCTCC ACCCGTACCA CATCACCAAT CCAATCCAAT TGCGATGATT GCCACACAAA AGATTACTAC
TTTTAACTAT TATTTTGTAT ATGGTTCTAA ATCATTTATT TGTAATTATT GAT

>Vigan.01G354800.01
TCTCTCTCTC TCTCTCTCTC TATCTCTCTC TCTCTCTCTC TATCTCTTAA GACACACACA CACGCACTCA CTCTTCACAA
CTGCGATTCA CGCCAATGGA TCGCAACAGT GTCTTCTCTC TCGCGTTCAT CTGCATTGTA ATAGCCGGCG TTGGAGGCCA
GTCTCCGGCG TCAGCGCCGT CGAGCACACC GGCAACTCCC GCCGCTTCCA CTCCTGCGGC AGCCCCTATC ACACCAAAAT
CACCTGCTCC CGTTGCTTCC CCCAAATCCT CTCCTCCCGC AGCATCACCT AAGGCCGCAA CCCCCGCATC GACGCCGGCG
GCATCTCCTC CAACCGCTAC AGCTCCTGCC CCTGCGACCA AGCCTCCGGC AGCGTCTCCT CCGGCTGCAA CTCCAGTGAG
CTCCCCACCG GCTCCAGTTC CAGTGAGCTC TCCCCCAGCT CCGGTTCCGG TGAGTTCTCC CCCTGCACCT GTGCCGACAG
TTGCTCCCGT AGTGGCGCCC ACCACCCCTG TGACTCCGGC TCCGGCTCCG GGAAAGCACA AGAAGACTAA GAAGCACAGT
GCTCCGGCAC CCTCACCGTC GTTGCTTGGT CCCCCTGCTC CACCCACAGG TGCTCCTGGT CCCAGCGAAG ATGCTACTTC
CCCTGGACCT GCATCTTCTG CCAACGATGA GAGTGGAGCA GAGACCATCA TGTGCTTGAA GAAGATTCTA GGAGGCTTAG
CTTTGGGCTG GGCTACCCTT GTTTTGGTCT TCTAGACAGA CTTTGTTACT GTTATTATAT TCTTGTATTG TATCATTTAT
TTCCTTTTTT TTAATTTTTC CTTTTCTTTC TCACCCTGTT TTGGGTACAC ATTACATTTA TTTACATTGT TACTTGGGAC
TCTATTATTC GATTGATGTC GTTGTCATTA CTGCTGCGTG CTTTTCTTTT AGTAGTGGTG AATCGCCGGA TTCTTTACCT
GTCTTTCAAT TTTCCGGTAG AATAGGAATT ACAATCTTTA GAGCTAATCT TAAGCCATTA CAACAGGATT CAAATTAAGC
ATTCTTAAAA CTTTCCATAT AAATTAAAAC TATTATTTTT ATTTTTAATT GTTCTTCTTT GAAATTTGAA CCATACGTTT
GGGTTACCAC TTTTACCATT AATACCATTA ATAGTTAACC GTGTCTGTGT CTGAGTGATA ATGAAGACAG TAAAGGAATA
AGGTAGAAGA AAACAAGGAA AACAAGGAAT TCATATTTCC CTTTTTCTTT GCTTCTACTC AACCAAACGC GTGTCAATGG
TCCATTGCTT ATTGAATTCG TCATTGCCAT TGACTGGTTG GATGAAATGG TAGAACCATA TCATAACTAT TGCACTGGCT
CCACCCGTAC CACATCACCA ATCCAATCCA ATTGCGATGA TTGCCACACA AAAGATTACT ACTTTTAACT ATTATTTTGT
ATATGGTTCT AAATCATTTA TTTGTAATTA TTGAT

>Vigan.01G354800.01
ATGGATCGCA ACAGTGTCTT CTCTCTCGCG TTCATCTGCA TTGTAATAGC CGGCGTTGGA GGCCAGTCTC CGGCGTCAGC
GCCGTCGAGC ACACCGGCAA CTCCCGCCGC TTCCACTCCT GCGGCAGCCC CTATCACACC AAAATCACCT GCTCCCGTTG
CTTCCCCCAA ATCCTCTCCT CCCGCAGCAT CACCTAAGGC CGCAACCCCC GCATCGACGC CGGCGGCATC TCCTCCAACC
GCTACAGCTC CTGCCCCTGC GACCAAGCCT CCGGCAGCGT CTCCTCCGGC TGCAACTCCA GTGAGCTCCC CACCGGCTCC
AGTTCCAGTG AGCTCTCCCC CAGCTCCGGT TCCGGTGAGT TCTCCCCCTG CACCTGTGCC GACAGTTGCT CCCGTAGTGG
CGCCCACCAC CCCTGTGACT CCGGCTCCGG CTCCGGGAAA GCACAAGAAG ACTAAGAAGC ACAGTGCTCC GGCACCCTCA
CCGTCGTTGC TTGGTCCCCC TGCTCCACCC ACAGGTGCTC CTGGTCCCAG CGAAGATGCT ACTTCCCCTG GACCTGCATC
TTCTGCCAAC GATGAGAGTG GAGCAGAGAC CATCATGTGC TTGAAGAAGA TTCTAGGAGG CTTAGCTTTG GGCTGGGCTA
CCCTTGTTTT GGTCTTCTAG 

>Vigan.01G354800.01
MDRNSVFSLA FICIVIAGVG GQSPASAPSS TPATPAASTP AAAPITPKSP APVASPKSSP PAASPKAATP ASTPAASPPT
ATAPAPATKP PAASPPAATP VSSPPAPVPV SSPPAPVPVS SPPAPVPTVA PVVAPTTPVT PAPAPGKHKK TKKHSAPAPS
PSLLGPPAPP TGAPGPSEDA TSPGPASSAN DESGAETIMC LKKILGGLAL GWATLVLVF*