GBrowse Details

Vigan.01G260600.01

Basic Information:
Name: Vigan.01G260600.01
Multiple alignment
Variant Information
Position: Chr01:37045789..37046909 (- strand)
Length: 1121
Functional Information:
Description: Similar to Tau class glutathione S-transferase. [K9M8M1, Glycine soja]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.93,4.95,12.24,14.92,78.21,13.41,56.09,9.69
Arabidopsis thaliana homolog: AT3G09270.1
Automatic updates:
Name: KM818427 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU4) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KM818434 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU12) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:37045789..37045949 (- strand)
Length: 161
Type: three_prime_UTR
Position: Chr01:37045950..37046288 (- strand)
Length: 339
Type: CDS
Position: Chr01:37046359..37046679 (- strand)
Length: 321
Type: CDS
Position: Chr01:37046680..37046909 (- strand)
Length: 230
Type: five_prime_UTR

>Vigan.01G260600.01 class=Sequence position=Chr01:37045789..37046909 (- strand)
GGATTGTTTT GTCATCCGGT TCTTAATTGA ATGGAAAAAT ACCGAAAGCT TAATATAATA TGAAATACAT GAGATTGGAG
GAAACCACCT ACCACTAGCT CCACCAAACC CCAGTCCCCC GAAGTTGACC AAAACGAAAC CAAATTCCAA CTTGAGGAAT
CTCTGTGCTC TGTGGAAACC CTACCTATAA AACCGTACTT TGTTGCAGAG TTAAATTTTG TGCATTAGCA ATGGGTTCAG
GGAGCTCGGA AGTGAAGGTA TTGGGGAAGT GGGCGAGCCC ATTTAGCAAC AGGGTTGAGC TCGCTCTGAA GCTGAAGGGA
GTAACCTACG AATACTCCGA GGAAGATCTC GCCAACAAGA GCCATGACCT ACTCAAATAC AACCCTGTTC ACAAGAAGGT
TCCTGTTCTC GTCCACAACG GAAACCCTCT AGCTGAGTCG CTTCTTATTG TTGAATACAT CGATGAGACT TGGAATAATA
ACCCCCTTTT GCCTCAACAC CCTTACGAGA GAGCCTTGGC ACGTTTCTGG GCTAAGACCT TAGATGACAA GGTATGATTT
ACCTTATATT TCTAACACTA TCTTCAATTT CAAAACTCAT CATTCAATTT TATTTTTTTA GATTTTGCCT GCAATATGGA
ATGCATGCTG GAGTGATGAG AAGGGGCGAG ATAAAACAAC GACGGAAGCC ATGGAAGCTT TGGAGATCCT GCAGGAAGCA
CTGAAGGAGA AGAGGTTCTT TGGTGGAGAG AGCATAGGAT TGGTAGATAT TGCTGCCAAT TTCATTGGAT ATTGGGTTGA
AATATTGCAG GAAATTGCAG GGTTGAAATT GCTTACTCTT GAGAAATTTC CCAAGTTATA TAAATGGAGC CAAGAGTTTG
TGAATCACCC TGTCATCAAT GAGGGCCTGC CTCCCAGAGA TCAGTTGTTT GCTTTCTTCA AAGCTTCTTC AAAGAAATAG
AACAATTTCA GAGGTCGGAT TCGTAATAAA TTCCTAATGT TTTTCTTCCA ACTATTCATC AGAAACACCT GCCATTGTTA
GGGTATTGCC TCTTTTGTGT TGGTTCTCTG TTTTGTTGCT TCCCTTAACA ATATTAATAT ATTTATTATT TTCTTTTTAA
A

>Vigan.01G260600.01
GGATTGTTTT GTCATCCGGT TCTTAATTGA ATGGAAAAAT ACCGAAAGCT TAATATAATA TGAAATACAT GAGATTGGAG
GAAACCACCT ACCACTAGCT CCACCAAACC CCAGTCCCCC GAAGTTGACC AAAACGAAAC CAAATTCCAA CTTGAGGAAT
CTCTGTGCTC TGTGGAAACC CTACCTATAA AACCGTACTT TGTTGCAGAG TTAAATTTTG TGCATTAGCA ATGGGTTCAG
GGAGCTCGGA AGTGAAGGTA TTGGGGAAGT GGGCGAGCCC ATTTAGCAAC AGGGTTGAGC TCGCTCTGAA GCTGAAGGGA
GTAACCTACG AATACTCCGA GGAAGATCTC GCCAACAAGA GCCATGACCT ACTCAAATAC AACCCTGTTC ACAAGAAGGT
TCCTGTTCTC GTCCACAACG GAAACCCTCT AGCTGAGTCG CTTCTTATTG TTGAATACAT CGATGAGACT TGGAATAATA
ACCCCCTTTT GCCTCAACAC CCTTACGAGA GAGCCTTGGC ACGTTTCTGG GCTAAGACCT TAGATGACAA GATTTTGCCT
GCAATATGGA ATGCATGCTG GAGTGATGAG AAGGGGCGAG ATAAAACAAC GACGGAAGCC ATGGAAGCTT TGGAGATCCT
GCAGGAAGCA CTGAAGGAGA AGAGGTTCTT TGGTGGAGAG AGCATAGGAT TGGTAGATAT TGCTGCCAAT TTCATTGGAT
ATTGGGTTGA AATATTGCAG GAAATTGCAG GGTTGAAATT GCTTACTCTT GAGAAATTTC CCAAGTTATA TAAATGGAGC
CAAGAGTTTG TGAATCACCC TGTCATCAAT GAGGGCCTGC CTCCCAGAGA TCAGTTGTTT GCTTTCTTCA AAGCTTCTTC
AAAGAAATAG AACAATTTCA GAGGTCGGAT TCGTAATAAA TTCCTAATGT TTTTCTTCCA ACTATTCATC AGAAACACCT
GCCATTGTTA GGGTATTGCC TCTTTTGTGT TGGTTCTCTG TTTTGTTGCT TCCCTTAACA ATATTAATAT ATTTATTATT
TTCTTTTTAA A

>Vigan.01G260600.01
ATGGGTTCAG GGAGCTCGGA AGTGAAGGTA TTGGGGAAGT GGGCGAGCCC ATTTAGCAAC AGGGTTGAGC TCGCTCTGAA
GCTGAAGGGA GTAACCTACG AATACTCCGA GGAAGATCTC GCCAACAAGA GCCATGACCT ACTCAAATAC AACCCTGTTC
ACAAGAAGGT TCCTGTTCTC GTCCACAACG GAAACCCTCT AGCTGAGTCG CTTCTTATTG TTGAATACAT CGATGAGACT
TGGAATAATA ACCCCCTTTT GCCTCAACAC CCTTACGAGA GAGCCTTGGC ACGTTTCTGG GCTAAGACCT TAGATGACAA
GATTTTGCCT GCAATATGGA ATGCATGCTG GAGTGATGAG AAGGGGCGAG ATAAAACAAC GACGGAAGCC ATGGAAGCTT
TGGAGATCCT GCAGGAAGCA CTGAAGGAGA AGAGGTTCTT TGGTGGAGAG AGCATAGGAT TGGTAGATAT TGCTGCCAAT
TTCATTGGAT ATTGGGTTGA AATATTGCAG GAAATTGCAG GGTTGAAATT GCTTACTCTT GAGAAATTTC CCAAGTTATA
TAAATGGAGC CAAGAGTTTG TGAATCACCC TGTCATCAAT GAGGGCCTGC CTCCCAGAGA TCAGTTGTTT GCTTTCTTCA
AAGCTTCTTC AAAGAAATAG 

>Vigan.01G260600.01
MGSGSSEVKV LGKWASPFSN RVELALKLKG VTYEYSEEDL ANKSHDLLKY NPVHKKVPVL VHNGNPLAES LLIVEYIDET
WNNNPLLPQH PYERALARFW AKTLDDKILP AIWNACWSDE KGRDKTTTEA MEALEILQEA LKEKRFFGGE SIGLVDIAAN
FIGYWVEILQ EIAGLKLLTL EKFPKLYKWS QEFVNHPVIN EGLPPRDQLF AFFKASSKK*