GBrowse Details

Vigan.01G032400.01

Basic Information:
Name: Vigan.01G032400.01
Multiple alignment
Variant Information
Position: Chr01:2255816..2259002 (+ strand)
Length: 3187
Functional Information:
Description: Similar to Uncharacterized protein. [I1KPW0, Glycine max]
GO: Biological Process: carbohydrate metabolic process (GO:0005975)
Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553)
InterPro: Glycoside hydrolase, family 17 (IPR000490)
X8 (IPR012946)
Glycoside hydrolase, catalytic domain (IPR013781)
Glycoside hydrolase, superfamily (IPR017853)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.08,4.70,11.73,3.34,8.31,18.51,5.91,7.44
Arabidopsis thaliana homolog: AT4G29360.1, AT5G56590.1
Automatic updates:
Name: NM_001376206 NCBI(nuccore)
Organism: Arachis hypogaea
Description: Arachis hypogaea glucan endo-1,3-beta-glucosidase 13 (LOC112802062), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:2255816..2256073 (+ strand)
Length: 258
Type: five_prime_UTR
Position: Chr01:2256074..2256128 (+ strand)
Length: 55
Type: CDS
Position: Chr01:2256824..2258098 (+ strand)
Length: 1275
Type: CDS
Position: Chr01:2258409..2258439 (+ strand)
Length: 31
Type: CDS
Position: Chr01:2258559..2258700 (+ strand)
Length: 142
Type: CDS
Position: Chr01:2258701..2259002 (+ strand)
Length: 302
Type: three_prime_UTR

>Vigan.01G032400.01 class=Sequence position=Chr01:2255816..2259002 (+ strand)
AAAAAAATGC ATTAGTGGAC AAAACATAAT GTCCTTCTCG CCACTCTCGA GCTCCAATCT CCAGACAGAC ACAGAGAAAC
AGAGAAAGAG AAACAAATAG CCGTTACTTT CTCAGCATTG GAACGTTAGG TAACAAAACC CCTTTCCCAA CATTCACTTC
GCACTTCGCA CTTCGCTCTT CGCTCTTCAC TCTTCACAAC ACAACATCCT CAAACGACAT CAACAACTTT CACTTCACAC
TCTCTGTTCC CCTCACCAAT GGTCACTCGC TTCACCCTCA TCTTTGCGGC TTCACTTTTC CTCTTGCTTC TCGGTTCGTA
TCTTCTATCT CTTCGTCTTT TCCTTTTCCT ACTTTGCTTC TCACAATGTC GGTGCTTCTA ATTTTTCTTT CCTTTTTTAC
ACATGTCAAT AGAGAAATAA TTAATGATCT CACTTGAACC AACGCTTCTA ATAAAAACTA GATTTATGCT TGCAGTTACC
TCTTTATTAA CCATTGTACC TGAGGTAAGG TTTTAATTAA AGAGATGTGT CTGATTTAGC TCTTCCTAGC CCTTCCCTTT
CAACTGGGTA GTGCTTCTTT CTCAATTTGT GTTACAGTTC GTGTGTAGAG ATCATTTGCT GCATCATACT TTGGTTTTGC
GTGACACCTT ATTATAGATA GAGCTGGTAA AATGGTCGAT AGAACCCAGT TTTAATTAAA TGCTGGGTTT TTTAGCTTCA
TCCTAGTATT GTCTTATTTT TTATGGGTTT AACCTTTGAA AGCCCCGCTA AAAGTCTTGC TTTTATTTTG CTCATGCTTA
CTTTAAAGGC CAAGATGACA TGTTTTGCCA CTTTTACCTT ACTGCACTTT GCATTGTGTC TATGGAATGA AAGAACTTAA
CGATTGATTG TTTAGACTTG CAGATACAGC TAGCAGAGCT AGCATTTTTC ACTCTCAATG AATAAGTCGT GTCATCTTTG
TACTGCATAA TTTTATTTAT TTTAATGTTA TGAAATATTC TGTGCCAGAT TGTTGCTCTG GGAGTTTTAT TGGGGTCTGC
TATGGAAGAA GCGCTGATGA CCTCCCTACA CCAGATAAGG TGGCACAATT GGTTCAACTT CACAAAATCA AATATCTCAG
AATTTACGAT TCTAATATAC AGGTTCTGAA GGCGTTTGCA AACACTGGGG TTGAGCTTAT GATTGGGGTT CCGAATTCAG
ATTTGTTGTC TCTGTCTCAG TTCCAATCTA ATGCAGATAG GTGGCTGAAA AACAGTGTTC TTCCTTACTA TCCTGCCACT
AAGATCACGT ACATAACTGT TGGTGCCGAA GTCACTGAGA GTCCTAATAA TGCCTCTTCA CTTGTTGTGC CTGCCATGAC
CAATGTGCTT ACAGCACTCA AGAAACTTGG GCTGCACAAA AAGATTAAAG TTTCCAGTAC CCATTCCCTT GGGGTTTTGT
CCCGATCTTT CCCACCTTCT GCCGGGGCTT TCAATAGCAG TCATGCACAT TTCCTAAAGC CAATGCTAGA ATTTCTTGCA
GAGAATCAGT CACCTTTTAT GATTGATATA TATCCATATT ATGCTTACCG TGACTCCCCT AGTAAAGTGT CTTTAGACTA
TGCCCTTTTT GAGGCATCCT CTGAAGTGAT TGATCCAAAC ACTGGTTTGT TGTATACAAA CATGTTTGAT GCCCAGATTG
ATGCTATTTA CTTTGCACTG ATGGCCTTAA ACTTCAGAAC AATTAAGGTC ATGGTCACTG AGACAGGTTG GCCTTCCAAA
GGATCACCTA AGGAGACAGC TGCAACTCCT GATAATGCAC AAACATACAA TACTAATCTG ATAAGGCATG TTATCAACAA
TACCGGTACT CCTGCAAAGC CCGGAGAGGA GCTAGATGTT TACCTTTTCT CATTGTTCAA TGAAAATAGG AAGCCCGGTT
TAGAATCTGA GAGAAACTGG GGATTATTTT ATCCCGACCA GACAAGTGTG TATAGCCTTG ATTTCACCGG GCGGGGTGCG
GTTGATATGA CCACCCAGGC AAATATAACC AAGTCCAATG GAACCACATG GTGCATTGCC TCGAGTAAGG CCTCACAAAT
TGACTTGCAG AATGCAATAG ATTGGGCATG TGGTCCTGGC AACGTGGACT GTACAGCCAT ACAGCCTAGT CAGCCATGTT
TTGAGCCAGA TAACCTAGCT TCACATGCAT CTTTTGCGTT TAATAGCTAT TATCAGCAAA ACGGAGCTTC TGATGTTGCA
TGCAGTTTTG GGGGCACGGG TATAAAAGTT GACAAGGATC CAAGTACGTT CATCACAACC TACTTCTGAT ACCGCATTTA
TCTTCATTGT TTGTGTTTTG TCATCTGCTG TTTTCCCATA AACTGTTGGA GAAAGCTAGT AAAATAGAAA TCCATTTTAG
CAGAAGAAAG TATTAATCTG TAGAGGGACA TCTGTTCGAT ATCATGGGGA AGTTGTTTGA TATCTGTCAA ACTGGCTGCT
CTCATAGTTA TTATGAATGT GTCCAAAAGT TGGTTTTACT ATGTTGTTTG TTCGTACCTA ACTGTTATGG TAGATTGTTT
TCGGTCACTG ATTAGCTAAT GTCTATTCTG CAGGCTATGA CAACTGCATC TACATGAGAG CTGGGTAAGT TCAATATAGG
CATGATCTTT GGCTGTTCCT TTTATTTTTT GACCTTAAAT TATACAAATT CAATTTAGGA TCAGTTATGA CATTTGGGTT
TTTCTTCCAT TGTTCTTTTG CAGAAGTAAT AAAACTGTGA CAAGCAATAC AACAGCAATG TCTTCTTCAA CTTCATCCTC
TTCACAGAAC GGAAATTCAA CATCAGTTTT TACTATTCTT CTTGTAACTT GTCTCTCCGC CTTGATGAAT ATTCAATCGT
ACTGACAAGC TAGATTGTTA AAAGTGCAGC ACGATTTTGC TTTGTTTTAG ATGTATGCTG CAATAGACAT GGATGGGGAA
GTAATAGCTT AGTGGAAAGC GTTGATATGC TGTGTAATGT ACGCATCAGA AAAAAGTGTA AACTCCGTTG TTGTTATATA
AGAATTGTTT TTTCTTCACT GCATTAGAGC AGTGATAGGC CAACAGTCTT TGGTACCAGT TTTGTGTGAC AAGTTATAAA
AGAAAACGCC TTGTCATCTA ATTTATCTTA AATTATGCGG TGTAATGCGT TGCTGCACCT CACTGTC

>Vigan.01G032400.01
AAAAAAATGC ATTAGTGGAC AAAACATAAT GTCCTTCTCG CCACTCTCGA GCTCCAATCT CCAGACAGAC ACAGAGAAAC
AGAGAAAGAG AAACAAATAG CCGTTACTTT CTCAGCATTG GAACGTTAGG TAACAAAACC CCTTTCCCAA CATTCACTTC
GCACTTCGCA CTTCGCTCTT CGCTCTTCAC TCTTCACAAC ACAACATCCT CAAACGACAT CAACAACTTT CACTTCACAC
TCTCTGTTCC CCTCACCAAT GGTCACTCGC TTCACCCTCA TCTTTGCGGC TTCACTTTTC CTCTTGCTTC TCGATTGTTG
CTCTGGGAGT TTTATTGGGG TCTGCTATGG AAGAAGCGCT GATGACCTCC CTACACCAGA TAAGGTGGCA CAATTGGTTC
AACTTCACAA AATCAAATAT CTCAGAATTT ACGATTCTAA TATACAGGTT CTGAAGGCGT TTGCAAACAC TGGGGTTGAG
CTTATGATTG GGGTTCCGAA TTCAGATTTG TTGTCTCTGT CTCAGTTCCA ATCTAATGCA GATAGGTGGC TGAAAAACAG
TGTTCTTCCT TACTATCCTG CCACTAAGAT CACGTACATA ACTGTTGGTG CCGAAGTCAC TGAGAGTCCT AATAATGCCT
CTTCACTTGT TGTGCCTGCC ATGACCAATG TGCTTACAGC ACTCAAGAAA CTTGGGCTGC ACAAAAAGAT TAAAGTTTCC
AGTACCCATT CCCTTGGGGT TTTGTCCCGA TCTTTCCCAC CTTCTGCCGG GGCTTTCAAT AGCAGTCATG CACATTTCCT
AAAGCCAATG CTAGAATTTC TTGCAGAGAA TCAGTCACCT TTTATGATTG ATATATATCC ATATTATGCT TACCGTGACT
CCCCTAGTAA AGTGTCTTTA GACTATGCCC TTTTTGAGGC ATCCTCTGAA GTGATTGATC CAAACACTGG TTTGTTGTAT
ACAAACATGT TTGATGCCCA GATTGATGCT ATTTACTTTG CACTGATGGC CTTAAACTTC AGAACAATTA AGGTCATGGT
CACTGAGACA GGTTGGCCTT CCAAAGGATC ACCTAAGGAG ACAGCTGCAA CTCCTGATAA TGCACAAACA TACAATACTA
ATCTGATAAG GCATGTTATC AACAATACCG GTACTCCTGC AAAGCCCGGA GAGGAGCTAG ATGTTTACCT TTTCTCATTG
TTCAATGAAA ATAGGAAGCC CGGTTTAGAA TCTGAGAGAA ACTGGGGATT ATTTTATCCC GACCAGACAA GTGTGTATAG
CCTTGATTTC ACCGGGCGGG GTGCGGTTGA TATGACCACC CAGGCAAATA TAACCAAGTC CAATGGAACC ACATGGTGCA
TTGCCTCGAG TAAGGCCTCA CAAATTGACT TGCAGAATGC AATAGATTGG GCATGTGGTC CTGGCAACGT GGACTGTACA
GCCATACAGC CTAGTCAGCC ATGTTTTGAG CCAGATAACC TAGCTTCACA TGCATCTTTT GCGTTTAATA GCTATTATCA
GCAAAACGGA GCTTCTGATG TTGCATGCAG TTTTGGGGGC ACGGGTATAA AAGTTGACAA GGATCCAAGC TATGACAACT
GCATCTACAT GAGAGCTGGA AGTAATAAAA CTGTGACAAG CAATACAACA GCAATGTCTT CTTCAACTTC ATCCTCTTCA
CAGAACGGAA ATTCAACATC AGTTTTTACT ATTCTTCTTG TAACTTGTCT CTCCGCCTTG ATGAATATTC AATCGTACTG
ACAAGCTAGA TTGTTAAAAG TGCAGCACGA TTTTGCTTTG TTTTAGATGT ATGCTGCAAT AGACATGGAT GGGGAAGTAA
TAGCTTAGTG GAAAGCGTTG ATATGCTGTG TAATGTACGC ATCAGAAAAA AGTGTAAACT CCGTTGTTGT TATATAAGAA
TTGTTTTTTC TTCACTGCAT TAGAGCAGTG ATAGGCCAAC AGTCTTTGGT ACCAGTTTTG TGTGACAAGT TATAAAAGAA
AACGCCTTGT CATCTAATTT ATCTTAAATT ATGCGGTGTA ATGCGTTGCT GCACCTCACT GTC

>Vigan.01G032400.01
ATGGTCACTC GCTTCACCCT CATCTTTGCG GCTTCACTTT TCCTCTTGCT TCTCGATTGT TGCTCTGGGA GTTTTATTGG
GGTCTGCTAT GGAAGAAGCG CTGATGACCT CCCTACACCA GATAAGGTGG CACAATTGGT TCAACTTCAC AAAATCAAAT
ATCTCAGAAT TTACGATTCT AATATACAGG TTCTGAAGGC GTTTGCAAAC ACTGGGGTTG AGCTTATGAT TGGGGTTCCG
AATTCAGATT TGTTGTCTCT GTCTCAGTTC CAATCTAATG CAGATAGGTG GCTGAAAAAC AGTGTTCTTC CTTACTATCC
TGCCACTAAG ATCACGTACA TAACTGTTGG TGCCGAAGTC ACTGAGAGTC CTAATAATGC CTCTTCACTT GTTGTGCCTG
CCATGACCAA TGTGCTTACA GCACTCAAGA AACTTGGGCT GCACAAAAAG ATTAAAGTTT CCAGTACCCA TTCCCTTGGG
GTTTTGTCCC GATCTTTCCC ACCTTCTGCC GGGGCTTTCA ATAGCAGTCA TGCACATTTC CTAAAGCCAA TGCTAGAATT
TCTTGCAGAG AATCAGTCAC CTTTTATGAT TGATATATAT CCATATTATG CTTACCGTGA CTCCCCTAGT AAAGTGTCTT
TAGACTATGC CCTTTTTGAG GCATCCTCTG AAGTGATTGA TCCAAACACT GGTTTGTTGT ATACAAACAT GTTTGATGCC
CAGATTGATG CTATTTACTT TGCACTGATG GCCTTAAACT TCAGAACAAT TAAGGTCATG GTCACTGAGA CAGGTTGGCC
TTCCAAAGGA TCACCTAAGG AGACAGCTGC AACTCCTGAT AATGCACAAA CATACAATAC TAATCTGATA AGGCATGTTA
TCAACAATAC CGGTACTCCT GCAAAGCCCG GAGAGGAGCT AGATGTTTAC CTTTTCTCAT TGTTCAATGA AAATAGGAAG
CCCGGTTTAG AATCTGAGAG AAACTGGGGA TTATTTTATC CCGACCAGAC AAGTGTGTAT AGCCTTGATT TCACCGGGCG
GGGTGCGGTT GATATGACCA CCCAGGCAAA TATAACCAAG TCCAATGGAA CCACATGGTG CATTGCCTCG AGTAAGGCCT
CACAAATTGA CTTGCAGAAT GCAATAGATT GGGCATGTGG TCCTGGCAAC GTGGACTGTA CAGCCATACA GCCTAGTCAG
CCATGTTTTG AGCCAGATAA CCTAGCTTCA CATGCATCTT TTGCGTTTAA TAGCTATTAT CAGCAAAACG GAGCTTCTGA
TGTTGCATGC AGTTTTGGGG GCACGGGTAT AAAAGTTGAC AAGGATCCAA GCTATGACAA CTGCATCTAC ATGAGAGCTG
GAAGTAATAA AACTGTGACA AGCAATACAA CAGCAATGTC TTCTTCAACT TCATCCTCTT CACAGAACGG AAATTCAACA
TCAGTTTTTA CTATTCTTCT TGTAACTTGT CTCTCCGCCT TGATGAATAT TCAATCGTAC TGA

>Vigan.01G032400.01
MVTRFTLIFA ASLFLLLLDC CSGSFIGVCY GRSADDLPTP DKVAQLVQLH KIKYLRIYDS NIQVLKAFAN TGVELMIGVP
NSDLLSLSQF QSNADRWLKN SVLPYYPATK ITYITVGAEV TESPNNASSL VVPAMTNVLT ALKKLGLHKK IKVSSTHSLG
VLSRSFPPSA GAFNSSHAHF LKPMLEFLAE NQSPFMIDIY PYYAYRDSPS KVSLDYALFE ASSEVIDPNT GLLYTNMFDA
QIDAIYFALM ALNFRTIKVM VTETGWPSKG SPKETAATPD NAQTYNTNLI RHVINNTGTP AKPGEELDVY LFSLFNENRK
PGLESERNWG LFYPDQTSVY SLDFTGRGAV DMTTQANITK SNGTTWCIAS SKASQIDLQN AIDWACGPGN VDCTAIQPSQ
PCFEPDNLAS HASFAFNSYY QQNGASDVAC SFGGTGIKVD KDPSYDNCIY MRAGSNKTVT SNTTAMSSST SSSSQNGNST
SVFTILLVTC LSALMNIQSY *