GBrowse Details

Vigan.01G023300.01

Basic Information:
Name: Vigan.01G023300.01
Multiple alignment
Variant Information
Position: Chr01:1534876..1538593 (+ strand)
Length: 3718
Functional Information:
Description: Similar to Uncharacterized protein. [I1K5T0, Glycine max]
GO: Molecular Function: aminoacyl-tRNA hydrolase activity (GO:0004045)
InterPro: Peptidyl-tRNA hydrolase (IPR001328)
Peptidyl-tRNA hydrolase, conserved site (IPR018171)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.77,3.57,6.51,12.27,7.84,1.62,5.17,6.53
Arabidopsis thaliana homolog: AT1G18440.1
Automatic updates:
Name: BT091668 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-8D19 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:1534876..1535049 (+ strand)
Length: 174
Type: five_prime_UTR
Position: Chr01:1535050..1535295 (+ strand)
Length: 246
Type: CDS
Position: Chr01:1535421..1535505 (+ strand)
Length: 85
Type: CDS
Position: Chr01:1536265..1536332 (+ strand)
Length: 68
Type: CDS
Position: Chr01:1536651..1536701 (+ strand)
Length: 51
Type: CDS
Position: Chr01:1536778..1536851 (+ strand)
Length: 74
Type: CDS
Position: Chr01:1537659..1537717 (+ strand)
Length: 59
Type: CDS
Position: Chr01:1537800..1537876 (+ strand)
Length: 77
Type: CDS
Position: Chr01:1537964..1538077 (+ strand)
Length: 114
Type: CDS
Position: Chr01:1538078..1538593 (+ strand)
Length: 516
Type: three_prime_UTR

>Vigan.01G023300.01 class=Sequence position=Chr01:1534876..1538593 (+ strand)
TAAGTATTCC CTGTCACGCG GGTGACCCGG GTTCGATCCC CGGCAACGGC GTTGTTTTTG TTTATCATCA TGCGTTTTAT
TTCTGTTTTT CCTGTTACTT TCCAACCTAG CTTCCTCGAT TCTTCTTTTC TAGGGTTTAT CTTTTATGTT TGTGTTTGAT
TGACGTTTGA AAAAATGAAC ATTTGTAGTT TTTGGGTGTC GTCCATGAAA ATCCCCTTTC ACGGGTGTCG ATTCTCAAGG
CCCTTCTTCT CTCTATCTTC TTCGTCTCGC AATCGCATTA TGACCATTCA AAGTTCTTCT TCTTCTACTT CTTCTGCTTC
CATATCAACC GAGTCCAAAG AGAAGAAGAA GGAAAATTTA CCTTGGTTAA TCGTTGGCCT CGGCAATCCA GGCAAAAAGT
ACGCTGCCAC TCGCCACAAT GTCTGTCAGT CACACTATGC ATACCCTCTC CATCTTTTCA TTTTGGATAG TTATAAAATC
AGTTTTGCGT TGCTTTTTTT GACATTTATA TTATTATAAC CTGTTTTGGA GCTTTATATT TTCAGGTGGG CTTTGAGATG
GTTGATGCCA TAGCTGAAGC TGAAGGGATA TCTATGAACA CTGTTTCCTT CAAAGCTTTA TTTGGGAAAG GTTAGATAGA
CCTTGACAAA ACCCTGCCTC TAATATTTCT CTTCAGTTAA TTTGGTTTTA TCTTTTCATA GAGACATGTC AGTCAGCTTT
AAAATTCAAA GTCTAGGTTA TTGGTAAAGA TATGATTTCT TTCTTGCTCC TAGATATCAC AAGTAGGAAT AATGCTTGTT
TTCTTTTTCT GCAATGCTTC TAACCATTGT GTTATCTCAC TGTACAAAGT TACGAGCATT TTGGTTTATC TCGCGGGTGG
CAATTTTTTG GGAGCTGTCT TACATGTCAA TTGTACAATT TAAAATACAT ATACAATTTA ACCAATATAT AATAAGTTTT
AGTGTCGGTT AGTTTATGCC ACTATTTCGG ATTGATAGAT ATGATATGCC TTGCATACTT CTAACGTATA TGTCTGAACT
CTGAATTCCT AACTCCCCAT CATCCTTACC TGTTTTAGCA TCATTTTTGT ATTCAGTTTT CTGCGGTATG ATGATAACTT
TTACTTTTTA GATAAGCCCA ATTGCGTTGT GGTTCGGGAT TTCTGTTGTT GTTAAGTGCG ATAGAAGTTT CTTGCCAAAC
CTGAATCCAT TTGTATTTAA TCACCAAACT AATGTAGTTG CCATGTTATG GTTTTTGCTT AAATTTTCAA ATATTGCAGA
CAGACGCTGG TTCCACAAGC TTTCAGAATA TTGGTGATAA AAGCAAATGG ATAAAAATTT AAGTATTTGC ATGTTCCCAT
TCGTGACGGA AATTGTTTTC TGGTTGCAGG TTTAATAGGT GATGTCCCAG TCATACTTGC AAAACCACAG ACTTTTATGA
ATTCTAGCGG TGAATCTGTA CGTGTGTATC TGGATATAAT GTTCAAATGT TTTAAAGCAA TGACATTTTG TTGTAGCTAT
GCTATGATGA CTCGTGTTTA CTCTTATGAC ATCAATTATT TCTTTTAATT TAAAGCTCTT TCTTAAGGTC AAATTTATAC
ATTTTATTAT ATAGTCATGT ATTATATGGT TTTTTAAAAA AATTCCATGT CTACATGTCC ATGTCCTTGT CATAATATAT
CTATATTCCA AGTTGGACCT TCACTTCCTA CGAATTCACT GTAATAAATA TTATATTTTG ATTATTATGG GTTGTTGTTT
CGATCTATTT TGAAGGTTGG GGCCATAGTT TCGTACTACA AGATTCCACT AAAGCAAGTA CTTGTGGTAT AATATCTATG
CTATGACTAC TTTGTTCTTT TTACTTTTAA AGCAATATGG CATTGATAAT TTTCTTTTTC AGATCTTTGA TGACTTGGAT
TTACCTTTTG CTAAATTGCG GCTTCTACCA AAGGGTGGAC ATGGAGGCCA CAATGGGTAA TTATAATTTT CTTTATTTGC
GCACTCTTTT TGCTACAGAA CCGGGTGTGT GCTTGCTTTG GCACCTTTGA ATATAAATCA ACATGTCCAT TGTTGTGAAT
AGCAAGGCCG GGATTGTTCG TATTTCTGAA AGTTGACATG TGATATTTAT CTTCCTTTAG TCACACCCAC AAGGTCAGGG
AAATGCTTAG CTAGAAAAAT ACTTTGTTGC ACAATCATCT TTTTTCATGC TCATCTGGAT CAAGGAAAAA TATTAGGTTG
TGGGATGCTA GACTCGCATG CCTTGTCTTG GAAAGTAACT ATTTATTTTC ATCTGATGAG GTTACATTTT TTGCATTCTG
TCTAATGATC AAGATGATAT CCTCGCTCAG TCTTGGGGCA AAGGGTGTTT GAGTGGCCTT GTTGTACAAC CAGTACAAAC
ATACAGAGAA CTAGAAAAAT TACTATAGGG AAAAAAAGTG AACAACTCCC TTTCTCTGCT GAAATAATAT GTAGGGATAA
ATCAGCCTCC TTGTCTCTGC ATCAAATCAT TTGATTTATG TGGTTTTTTA CTGTGCAAGT TTAAGAAACT CTTTTCTTGT
GTTGGGATTG GAGGGGGGGA GTGCATTGGG GGAACTGTAT ATAAGTTGTG GAAGAGGGTG GAAAGAAGGT TGCAATATTC
TGAGGGCAGG CATGCCGGAA GGCTAACTAT TTGTATTATG ATAATTTATA CTGGGTGATA TAGCAATAAG CATTTACCTT
GTTTCTTTCA AATCGAAAGA GAAATTAAGT GTCACTATTT TCATTTTCCT TGTTTTTTGG CAGAATGAAG AGTGTTATTA
ATCATTTCAA AGGGAATACT GGTTTTCCTC GTTTAAGAAT TGGTAAATTC ATACCATTTC AGTAATTTAT AATACATCTG
TATTACAATA ATTTATAATA CGATTCTATT TTATTGCTGA TTAGGCATCG GACGACCTCC CGGTAAAATG GATCCTGTAG
CATTTGTTCT TCGCACGTTC ACTAAACAGG AAAGAGAAGA GGTATGCATT TTGTTCACTT TTTGAAGTTT GAACTGACAA
CTGACTTGCC ACACATGGAA GTTCTAAACG TTCATAAAAT TATCTCAGTT GAGTTTTACA TTACAAGATG GAATAGAAGC
TCTTCGGATT CTTTTGCTGG AAGGATTTGA TAAAAGTGCA ACATTTGTTA ATAGTGCCAA AAAGATAGAG CAAACAGGTT
GAGGAATAGC TTATTGAATA TCCTTTTGAC AAGTACAAAC AAGGATCGTA TAGCAAGGAG ATACATACTA AAAAAGAGTA
AATTCGTTCA AGCAAATATT TATCCATTCT TTAAGAGGCA GTTTCTGCTC ATTGAATTCG AACCTGAAGC TTGGAATCTT
CGGGTACTAT TCTGTTGTGT TTTTTCAATT TTAAGCCCTG CCGGCACCCT GAATTATATA GTGTACAATG TTGTGAAATT
ATTATTAGGC AGTTGCAGGT AACTTATATA ATAATGATCA CATAAGATCA CTTTCTCTGT TTGTAAAGAT CCCATTTTTA
GCTGCCAGGA AGTTATAGCT CAAATTCACT CAACATCTGT CTTTTATTCT CTATCACTAT GTACTAGAAG GTTTTTCCCA
TGATTTTTAT TGGTTGACAA GACTATTTAT ACAACACTTG CTGATGCATG ATGTGGTCAA TGAGTTGTGT TTCTTAATCA
AAGTTATTGC GTATAATCTC TGCTTACATA TGTACGAC

>Vigan.01G023300.01
TAAGTATTCC CTGTCACGCG GGTGACCCGG GTTCGATCCC CGGCAACGGC GTTGTTTTTG TTTATCATCA TGCGTTTTAT
TTCTGTTTTT CCTGTTACTT TCCAACCTAG CTTCCTCGAT TCTTCTTTTC TAGGGTTTAT CTTTTATGTT TGTGTTTGAT
TGACGTTTGA AAAAATGAAC ATTTGTAGTT TTTGGGTGTC GTCCATGAAA ATCCCCTTTC ACGGGTGTCG ATTCTCAAGG
CCCTTCTTCT CTCTATCTTC TTCGTCTCGC AATCGCATTA TGACCATTCA AAGTTCTTCT TCTTCTACTT CTTCTGCTTC
CATATCAACC GAGTCCAAAG AGAAGAAGAA GGAAAATTTA CCTTGGTTAA TCGTTGGCCT CGGCAATCCA GGCAAAAAGT
ACGCTGCCAC TCGCCACAAT GTGGGCTTTG AGATGGTTGA TGCCATAGCT GAAGCTGAAG GGATATCTAT GAACACTGTT
TCCTTCAAAG CTTTATTTGG GAAAGGTTTA ATAGGTGATG TCCCAGTCAT ACTTGCAAAA CCACAGACTT TTATGAATTC
TAGCGGTGAA TCTGTTGGGG CCATAGTTTC GTACTACAAG ATTCCACTAA AGCAAGTACT TGTGATCTTT GATGACTTGG
ATTTACCTTT TGCTAAATTG CGGCTTCTAC CAAAGGGTGG ACATGGAGGC CACAATGGAA TGAAGAGTGT TATTAATCAT
TTCAAAGGGA ATACTGGTTT TCCTCGTTTA AGAATTGGCA TCGGACGACC TCCCGGTAAA ATGGATCCTG TAGCATTTGT
TCTTCGCACG TTCACTAAAC AGGAAAGAGA AGAGTTGAGT TTTACATTAC AAGATGGAAT AGAAGCTCTT CGGATTCTTT
TGCTGGAAGG ATTTGATAAA AGTGCAACAT TTGTTAATAG TGCCAAAAAG ATAGAGCAAA CAGGTTGAGG AATAGCTTAT
TGAATATCCT TTTGACAAGT ACAAACAAGG ATCGTATAGC AAGGAGATAC ATACTAAAAA AGAGTAAATT CGTTCAAGCA
AATATTTATC CATTCTTTAA GAGGCAGTTT CTGCTCATTG AATTCGAACC TGAAGCTTGG AATCTTCGGG TACTATTCTG
TTGTGTTTTT TCAATTTTAA GCCCTGCCGG CACCCTGAAT TATATAGTGT ACAATGTTGT GAAATTATTA TTAGGCAGTT
GCAGGTAACT TATATAATAA TGATCACATA AGATCACTTT CTCTGTTTGT AAAGATCCCA TTTTTAGCTG CCAGGAAGTT
ATAGCTCAAA TTCACTCAAC ATCTGTCTTT TATTCTCTAT CACTATGTAC TAGAAGGTTT TTCCCATGAT TTTTATTGGT
TGACAAGACT ATTTATACAA CACTTGCTGA TGCATGATGT GGTCAATGAG TTGTGTTTCT TAATCAAAGT TATTGCGTAT
AATCTCTGCT TACATATGTA CGAC

>Vigan.01G023300.01
ATGAACATTT GTAGTTTTTG GGTGTCGTCC ATGAAAATCC CCTTTCACGG GTGTCGATTC TCAAGGCCCT TCTTCTCTCT
ATCTTCTTCG TCTCGCAATC GCATTATGAC CATTCAAAGT TCTTCTTCTT CTACTTCTTC TGCTTCCATA TCAACCGAGT
CCAAAGAGAA GAAGAAGGAA AATTTACCTT GGTTAATCGT TGGCCTCGGC AATCCAGGCA AAAAGTACGC TGCCACTCGC
CACAATGTGG GCTTTGAGAT GGTTGATGCC ATAGCTGAAG CTGAAGGGAT ATCTATGAAC ACTGTTTCCT TCAAAGCTTT
ATTTGGGAAA GGTTTAATAG GTGATGTCCC AGTCATACTT GCAAAACCAC AGACTTTTAT GAATTCTAGC GGTGAATCTG
TTGGGGCCAT AGTTTCGTAC TACAAGATTC CACTAAAGCA AGTACTTGTG ATCTTTGATG ACTTGGATTT ACCTTTTGCT
AAATTGCGGC TTCTACCAAA GGGTGGACAT GGAGGCCACA ATGGAATGAA GAGTGTTATT AATCATTTCA AAGGGAATAC
TGGTTTTCCT CGTTTAAGAA TTGGCATCGG ACGACCTCCC GGTAAAATGG ATCCTGTAGC ATTTGTTCTT CGCACGTTCA
CTAAACAGGA AAGAGAAGAG TTGAGTTTTA CATTACAAGA TGGAATAGAA GCTCTTCGGA TTCTTTTGCT GGAAGGATTT
GATAAAAGTG CAACATTTGT TAATAGTGCC AAAAAGATAG AGCAAACAGG TTGA

>Vigan.01G023300.01
MNICSFWVSS MKIPFHGCRF SRPFFSLSSS SRNRIMTIQS SSSSTSSASI STESKEKKKE NLPWLIVGLG NPGKKYAATR
HNVGFEMVDA IAEAEGISMN TVSFKALFGK GLIGDVPVIL AKPQTFMNSS GESVGAIVSY YKIPLKQVLV IFDDLDLPFA
KLRLLPKGGH GGHNGMKSVI NHFKGNTGFP RLRIGIGRPP GKMDPVAFVL RTFTKQEREE LSFTLQDGIE ALRILLLEGF
DKSATFVNSA KKIEQTG*