GBrowse Details

Vigan.01G013800.01

Basic Information:
Name: Vigan.01G013800.01
Multiple alignment
Variant Information
Position: Chr01:834909..838105 (- strand)
Length: 3197
Functional Information:
Description: Similar to Uncharacterized protein. [I1KQD5, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Biological Process: response to heat (GO:0009408)
Cellular Component: nucleus (GO:0005634)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: Heat shock factor (HSF)-type, DNA-binding (IPR000232)
Winged helix-turn-helix DNA-binding domain (IPR011991)
Heat shock transcription factor, plant (IPR027709)
Heat shock transcription factor family (IPR027725)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:14.08,13.26,4.23,10.51,9.54,7.68,4.99,6.10
Arabidopsis thaliana homolog: AT1G67970.1
Automatic updates:
Name: NM_001353429 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max heat stress transcription factor 14 (HSF-14), mRNA.
PubMed ID: 25416131 NCBI(pubmed)
18927222 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:834909..835806 (- strand)
Length: 898
Type: three_prime_UTR
Position: Chr01:835807..836676 (- strand)
Length: 870
Type: CDS
Position: Chr01:837733..837957 (- strand)
Length: 225
Type: CDS
Position: Chr01:837958..838105 (- strand)
Length: 148
Type: five_prime_UTR

>Vigan.01G013800.01 class=Sequence position=Chr01:834909..838105 (- strand)
AAAAAAGAAA AAGGTTGGAA AGTGCTGTGA CGGTACATAA GGAGCCGCAT GGAAATTTCA TTTCATTTCG TTTGGAGTTT
ACAACTTTGA ACTCATCTCT TCAGTTCCCT TTTCTCGCTC TTCTCTTCTC TTGTTTGTTG TATTAGCGAT GGTGAAATCG
AACGAAAATG GTTCTGGTTC AGGTGCGGTG CCTCCGTTCT TGAAAAAGTG TTACGATATG GTGGAAGACC GGAACACGGA
CTCCGTTATC CGTTGGAGCG ACGGCGGCGA CAGTTTCGTC ATATCTGACA CCACGCAATT CTCCGTCACG CTACTTCCTA
CCTATTTCAA ACACAACAAC TTCTCCAGTT TTATTAGACA ACTCAATATT TATGTTTGTC TCTTTCACTC TTTTCTTCAG
CTCAATTCTG TATTAGTTGC TTGTTTCTCT TAGTTATCTG AAGATGAATA CATAAATAAA GAAATAAATT ATTATTTGGT
ATGTTTATAA TTCGTTTTTG TCTGATTGTG TGATTCGTAA ATTGGCTGCA ATTTCCATGT TCTTACAGAG TGCCTGAAAT
TGTTGGTGGT GTTAAAAAAA TTAGGTTATG GTTGTGATGC AGAAACTCGC TGTTTGATGT ATATAACTCT TGCATGCACT
TGAAAACCCT TTCTGTAGGG TGAGCCTTTG AAATTGTGTC GGCAACTAGA TGGAAAATAA ATTGGTGTTT GTTCGGATGA
GTTTTACCCG CTTGACAAAT CGTTCTGTGC TCTTAAGATA TTATTTGAGT ACTGTTCGTT TATTTGATTA TTCATTCTTT
TTTACCTTAC ATTTTAGAAT AGTGTTCATA TTTCTCATAC AAGTTACTTT TGTCCAGTTA ACACAATTTG GATATGGTTG
CCTATTCACA CTTAATTTTA ACTTGAACCA GTGTTTTTGA AAGCGATATC AAGTTTGCTT ATTCGAATTC AAAACCATTT
TTGGATATCT ATTAGCGAAG ACGAGAAACA TAAATTTCTA TCTTTTAGGT TGAATTTGGA TTTAGATCAT TGCAGTTGAT
AGCCAAACAC ACTATCAATT TGGAGAATTA GATTGCTTTA AACTTAAGTT TACAAACTTT AATTCAATGC ACAGTCTTAG
AAGAAATGTT CTGATCCATT CCCTTATTAC TGGCTTTATA ACTAATTAGT TGTTAATTTC TGAATTGGCC TCGATATTTC
ATAACAACCT AGTCACTGGG GCGGGCTCCT TGTTGACTGA TAAATTAAAA GCATTTTAAA TAACACCTGA CTTTGTGAAA
TGGTACAACA TCTCAAGAGT ATCGGCTTGT TTATATTGAT GTGCATGTTT GTTGCCTCTA TAGGTTTGTT CCTTTATCTC
TATGTCATTT GTTATGGTTG AGGAGAGAGT CTTTTACTGT AACTAATTGG TAACTGAAAT ATCTAACAGG GTTTTAGGAA
AATTGATACG GATTGCTGGG AATTTGCCAA TGAAAATTTT GTTAGGGGTC AAAAGCAATT GTTGAAAAAT ATACGCAGAA
GAAAACATCC GCACGTTGCA GACCAACAAA AAGCATTGCC GCAGAATGAC AATAGTGATG AACCATCCCA AGAGGTACCC
CATCATGGCC TCTGGAAAGA AGTTGAGAAT CTCAAATCTG ATAAAAATTC GCTGACCCAG GAGTTGGTCA AACTCAGGCA
ACACCAGGAA TCTGCTGAGA ACAAGTTGCT GCTCCTGAGC GATCGCCTTC AAGGAATGGA AAAGCATCAG CAACAGATGT
TATCATTCTT AGTCATGGTC GTGCAAAGCC CTGGGTTCCT GGTTCAATTG CTTCATCCAA AGGAAAATAA TTGGCGTTTG
TCTGAATCAT GGAATGTATT AGATGAAGAT AAACAAGATG ACAAGCCAAT TGCTTCTGAT GGGATGATAA TAAAGTATAA
GCCACCTGTA GGTGAAAAAC TCAAGCCTGT AGTTCCCCTA CCTCCTGCTT TCGAAAAACA ATCAGAACCT GAGCTGGCTG
CCGATGGGTT CAAAGACTTG TGCATTAGTT CCGAGTTCAT GAAAGTGCTT ATGGATGAAA AATTGAGTCC ACTAGAAAAC
CATTCTCCCT TTCTCCTACC AGATTTACCT GATGACGGTT CATGGGAACA GCTTTTCCTA GGCAGTCCTT TCCTGGGAAA
CATTGAAGAT TCTAATAAAG AAAGTGAGGA GCGCACGGAT AGTGGAATGG AAATGGAACC GATAATATCA GAGACTCCAA
ATGAAAATTC TCGAACTTTT GAATCGATGA TTGTAGAGAT GGAGAAAACT CGAGAATGAG TTGGAATTTG GAGGGGCCAG
AGTTTGGAAT CTCATACTGA GCTAATGGAG CTTTTGTTTC TGAAACTAAC AATATATAGG GAAGGAAGTA TTAATGTCCA
TTATTTTTCA GCTGGGCTGT CTTCACAAAT TGCTTGGCGC TATAATTATA TTATAGTATT AAGTCGCAAT TATTATCTCT
CCTATCTTTC ATGGTAGAGA TCCTCATCTC GAATCCGTGT AAGCCTGCTC TCATTTATCT GTTGAGATGC TAGATATGCA
TGTTATTTTT GTGTGTGTGT GTGTGTGTTT TTGGATAGAT GATTAAACAT ACTTTAAGAG TTTGAAGGTT CTGTCGATAT
TGTGCTGTCA GTAAGGTTCA GTTTGTATCT GAAAACTAAT CCTGATTTTC CTCGTGGACA GGTTTTACCA TCTTGATAGA
TGTGAGAATG GGAGATGTCT GGTAGTGTGG CTGCCTATTT ATGATGGATC GAATGTTTCT TACTTGGAGA ATTATAAGGG
AGAACGGCAC CTTTATTTTT TGCATGTTAT TGGACATGCC TTCATATATA AAATTTCATA TGATGCATGC ATACTACTTT
TGCATATTAT TGCAGAAGCC AGTGCTTCTG ACATGCTGTT TGCTACCTAC CTGTATAGTT CTCATGCCTC TGAACCATGT
TTGTGTTTGA TATGGCGGCC AAGAGATTCT GTTGCCCCCA CAAAAAGTGA CATCATAGTA TGACATCTTT TTTTTTTCTT
TGTTAAATTA AGGATCAGGG CTAACTTCAA AACATTTTGG GATGTTTAAC GGGTACATGT AAATTCATTA GGAGTCTGGG
AACACTGATT AGTGACATGA GAAATTCTCG AGAAGATCAT TACTCCATAA GCTATTGCCT CTTATCCAAA ATTATTG

>Vigan.01G013800.01
AAAAAAGAAA AAGGTTGGAA AGTGCTGTGA CGGTACATAA GGAGCCGCAT GGAAATTTCA TTTCATTTCG TTTGGAGTTT
ACAACTTTGA ACTCATCTCT TCAGTTCCCT TTTCTCGCTC TTCTCTTCTC TTGTTTGTTG TATTAGCGAT GGTGAAATCG
AACGAAAATG GTTCTGGTTC AGGTGCGGTG CCTCCGTTCT TGAAAAAGTG TTACGATATG GTGGAAGACC GGAACACGGA
CTCCGTTATC CGTTGGAGCG ACGGCGGCGA CAGTTTCGTC ATATCTGACA CCACGCAATT CTCCGTCACG CTACTTCCTA
CCTATTTCAA ACACAACAAC TTCTCCAGTT TTATTAGACA ACTCAATATT TATGGTTTTA GGAAAATTGA TACGGATTGC
TGGGAATTTG CCAATGAAAA TTTTGTTAGG GGTCAAAAGC AATTGTTGAA AAATATACGC AGAAGAAAAC ATCCGCACGT
TGCAGACCAA CAAAAAGCAT TGCCGCAGAA TGACAATAGT GATGAACCAT CCCAAGAGGT ACCCCATCAT GGCCTCTGGA
AAGAAGTTGA GAATCTCAAA TCTGATAAAA ATTCGCTGAC CCAGGAGTTG GTCAAACTCA GGCAACACCA GGAATCTGCT
GAGAACAAGT TGCTGCTCCT GAGCGATCGC CTTCAAGGAA TGGAAAAGCA TCAGCAACAG ATGTTATCAT TCTTAGTCAT
GGTCGTGCAA AGCCCTGGGT TCCTGGTTCA ATTGCTTCAT CCAAAGGAAA ATAATTGGCG TTTGTCTGAA TCATGGAATG
TATTAGATGA AGATAAACAA GATGACAAGC CAATTGCTTC TGATGGGATG ATAATAAAGT ATAAGCCACC TGTAGGTGAA
AAACTCAAGC CTGTAGTTCC CCTACCTCCT GCTTTCGAAA AACAATCAGA ACCTGAGCTG GCTGCCGATG GGTTCAAAGA
CTTGTGCATT AGTTCCGAGT TCATGAAAGT GCTTATGGAT GAAAAATTGA GTCCACTAGA AAACCATTCT CCCTTTCTCC
TACCAGATTT ACCTGATGAC GGTTCATGGG AACAGCTTTT CCTAGGCAGT CCTTTCCTGG GAAACATTGA AGATTCTAAT
AAAGAAAGTG AGGAGCGCAC GGATAGTGGA ATGGAAATGG AACCGATAAT ATCAGAGACT CCAAATGAAA ATTCTCGAAC
TTTTGAATCG ATGATTGTAG AGATGGAGAA AACTCGAGAA TGAGTTGGAA TTTGGAGGGG CCAGAGTTTG GAATCTCATA
CTGAGCTAAT GGAGCTTTTG TTTCTGAAAC TAACAATATA TAGGGAAGGA AGTATTAATG TCCATTATTT TTCAGCTGGG
CTGTCTTCAC AAATTGCTTG GCGCTATAAT TATATTATAG TATTAAGTCG CAATTATTAT CTCTCCTATC TTTCATGGTA
GAGATCCTCA TCTCGAATCC GTGTAAGCCT GCTCTCATTT ATCTGTTGAG ATGCTAGATA TGCATGTTAT TTTTGTGTGT
GTGTGTGTGT GTTTTTGGAT AGATGATTAA ACATACTTTA AGAGTTTGAA GGTTCTGTCG ATATTGTGCT GTCAGTAAGG
TTCAGTTTGT ATCTGAAAAC TAATCCTGAT TTTCCTCGTG GACAGGTTTT ACCATCTTGA TAGATGTGAG AATGGGAGAT
GTCTGGTAGT GTGGCTGCCT ATTTATGATG GATCGAATGT TTCTTACTTG GAGAATTATA AGGGAGAACG GCACCTTTAT
TTTTTGCATG TTATTGGACA TGCCTTCATA TATAAAATTT CATATGATGC ATGCATACTA CTTTTGCATA TTATTGCAGA
AGCCAGTGCT TCTGACATGC TGTTTGCTAC CTACCTGTAT AGTTCTCATG CCTCTGAACC ATGTTTGTGT TTGATATGGC
GGCCAAGAGA TTCTGTTGCC CCCACAAAAA GTGACATCAT AGTATGACAT CTTTTTTTTT TCTTTGTTAA ATTAAGGATC
AGGGCTAACT TCAAAACATT TTGGGATGTT TAACGGGTAC ATGTAAATTC ATTAGGAGTC TGGGAACACT GATTAGTGAC
ATGAGAAATT CTCGAGAAGA TCATTACTCC ATAAGCTATT GCCTCTTATC CAAAATTATT G

>Vigan.01G013800.01
ATGGTGAAAT CGAACGAAAA TGGTTCTGGT TCAGGTGCGG TGCCTCCGTT CTTGAAAAAG TGTTACGATA TGGTGGAAGA
CCGGAACACG GACTCCGTTA TCCGTTGGAG CGACGGCGGC GACAGTTTCG TCATATCTGA CACCACGCAA TTCTCCGTCA
CGCTACTTCC TACCTATTTC AAACACAACA ACTTCTCCAG TTTTATTAGA CAACTCAATA TTTATGGTTT TAGGAAAATT
GATACGGATT GCTGGGAATT TGCCAATGAA AATTTTGTTA GGGGTCAAAA GCAATTGTTG AAAAATATAC GCAGAAGAAA
ACATCCGCAC GTTGCAGACC AACAAAAAGC ATTGCCGCAG AATGACAATA GTGATGAACC ATCCCAAGAG GTACCCCATC
ATGGCCTCTG GAAAGAAGTT GAGAATCTCA AATCTGATAA AAATTCGCTG ACCCAGGAGT TGGTCAAACT CAGGCAACAC
CAGGAATCTG CTGAGAACAA GTTGCTGCTC CTGAGCGATC GCCTTCAAGG AATGGAAAAG CATCAGCAAC AGATGTTATC
ATTCTTAGTC ATGGTCGTGC AAAGCCCTGG GTTCCTGGTT CAATTGCTTC ATCCAAAGGA AAATAATTGG CGTTTGTCTG
AATCATGGAA TGTATTAGAT GAAGATAAAC AAGATGACAA GCCAATTGCT TCTGATGGGA TGATAATAAA GTATAAGCCA
CCTGTAGGTG AAAAACTCAA GCCTGTAGTT CCCCTACCTC CTGCTTTCGA AAAACAATCA GAACCTGAGC TGGCTGCCGA
TGGGTTCAAA GACTTGTGCA TTAGTTCCGA GTTCATGAAA GTGCTTATGG ATGAAAAATT GAGTCCACTA GAAAACCATT
CTCCCTTTCT CCTACCAGAT TTACCTGATG ACGGTTCATG GGAACAGCTT TTCCTAGGCA GTCCTTTCCT GGGAAACATT
GAAGATTCTA ATAAAGAAAG TGAGGAGCGC ACGGATAGTG GAATGGAAAT GGAACCGATA ATATCAGAGA CTCCAAATGA
AAATTCTCGA ACTTTTGAAT CGATGATTGT AGAGATGGAG AAAACTCGAG AATGA

>Vigan.01G013800.01
MVKSNENGSG SGAVPPFLKK CYDMVEDRNT DSVIRWSDGG DSFVISDTTQ FSVTLLPTYF KHNNFSSFIR QLNIYGFRKI
DTDCWEFANE NFVRGQKQLL KNIRRRKHPH VADQQKALPQ NDNSDEPSQE VPHHGLWKEV ENLKSDKNSL TQELVKLRQH
QESAENKLLL LSDRLQGMEK HQQQMLSFLV MVVQSPGFLV QLLHPKENNW RLSESWNVLD EDKQDDKPIA SDGMIIKYKP
PVGEKLKPVV PLPPAFEKQS EPELAADGFK DLCISSEFMK VLMDEKLSPL ENHSPFLLPD LPDDGSWEQL FLGSPFLGNI
EDSNKESEER TDSGMEMEPI ISETPNENSR TFESMIVEME KTRE*