Variant information

Chr09:32775348 - 32785320

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
32775654GC411580.771.00UPSTREAM(|1895||None|Vigan.09G182600.01), UTR_5_PRIME(|832||None|Vigan.09G182700.01)Vigna nepalensis
32775841GA491903.771.00UPSTREAM(|2082||None|Vigan.09G182600.01), UTR_5_PRIME(|645||None|Vigan.09G182700.01)Vigna nepalensis
32777290CT511982.771.00INTRON(|||None|Vigan.09G182700.01), UPSTREAM(|3531||None|Vigan.09G182600.01)Vigna nepalensis
32777969CG471866.771.00DOWNSTREAM(|4790||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01), UPSTREAM(|4210||None|Vigan.09G182600.01)Vigna nepalensis
32778376CT431694.771.00DOWNSTREAM(|4383||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01), UPSTREAM(|4617||None|Vigan.09G182600.01)Vigna nepalensis
32778428CT511943.771.00DOWNSTREAM(|4331||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01), UPSTREAM(|4669||None|Vigan.09G182600.01)Vigna nepalensis
32778726TC492225.771.00DOWNSTREAM(|4033||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01), UPSTREAM(|4967||None|Vigan.09G182600.01)Vigna nepalensis
32778738GC542393.771.00DOWNSTREAM(|4021||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01), UPSTREAM(|4979||None|Vigan.09G182600.01)Vigna nepalensis
32779053TC592414.771.00DOWNSTREAM(|3706||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32779132TA662348.771.00DOWNSTREAM(|3627||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32779284AG552100.771.00DOWNSTREAM(|3475||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32779359CG522096.771.00DOWNSTREAM(|3400||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32779418AT512008.771.00DOWNSTREAM(|3341||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32779906GA391575.771.00DOWNSTREAM(|2853||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32780388AC451836.771.00DOWNSTREAM(|2371||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32780679CT552198.771.00DOWNSTREAM(|2080||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32780825TA582363.771.00DOWNSTREAM(|1934||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32781253GA451699.771.00DOWNSTREAM(|1506||None|Vigan.09G182800.01), DOWNSTREAM(|4651||None|Vigan.09G182900.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32781623CA471952.771.00DOWNSTREAM(|1136||None|Vigan.09G182800.01), DOWNSTREAM(|4281||None|Vigan.09G182900.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32781701AG522149.771.00DOWNSTREAM(|1058||None|Vigan.09G182800.01), DOWNSTREAM(|4203||None|Vigan.09G182900.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32781884AG662680.771.00DOWNSTREAM(|4020||None|Vigan.09G182900.01), DOWNSTREAM(|875||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32782087GA501985.771.00DOWNSTREAM(|3817||None|Vigan.09G182900.01), DOWNSTREAM(|672||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32782368AG492053.771.00DOWNSTREAM(|3536||None|Vigan.09G182900.01), DOWNSTREAM(|391||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32782497AG421706.771.00DOWNSTREAM(|262||None|Vigan.09G182800.01), DOWNSTREAM(|3407||None|Vigan.09G182900.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32783479CG552181.771.00DOWNSTREAM(|2425||None|Vigan.09G182900.01), INTRON(|||None|Vigan.09G182800.01), NON_SYNONYMOUS_CODING(MISSENSE|Cta/Gta|L253V|None|Vigan.09G182700.01)Vigna nepalensis
32783492TC572237.771.00DOWNSTREAM(|2412||None|Vigan.09G182900.01), INTRON(|||None|Vigan.09G182800.01), NON_SYNONYMOUS_CODING(MISSENSE|gTt/gCt|V257A|None|Vigan.09G182700.01)Vigna nepalensis
32784288AG742995.771.00DOWNSTREAM(|1616||None|Vigan.09G182900.01), SYNONYMOUS_CODING(SILENT|tcA/tcG|S522|None|Vigan.09G182700.01), UTR_3_PRIME(|51||None|Vigan.09G182800.01)Vigna nepalensis
32784681AC532173.771.00DOWNSTREAM(|1223||None|Vigan.09G182900.01), SYNONYMOUS_CODING(SILENT|gcA/gcC|A627|None|Vigan.09G182700.01), UTR_5_PRIME(|130||None|Vigan.09G182800.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
32777273GGC401193.731.00INTRON(|||None|Vigan.09G182700.01), UPSTREAM(|3515||None|Vigan.09G182600.01)Vigna nepalensis
32777329CCCAATATTT522375.731.00INTRON(|||None|Vigan.09G182700.01), UPSTREAM(|3571||None|Vigan.09G182600.01)Vigna nepalensis
32777381AAT491631.731.00INTRON(|||None|Vigan.09G182700.01), UPSTREAM(|3623||None|Vigan.09G182600.01)Vigna nepalensis
32777862TAT481525.731.00DOWNSTREAM(|4896||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01), UPSTREAM(|4104||None|Vigan.09G182600.01)Vigna nepalensis
32780411ATTTATTGGAATATTAATATTGCTCATGCTAATA462024.731.00DOWNSTREAM(|2347||None|Vigan.09G182800.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis
32781116TTG401306.731.00DOWNSTREAM(|1642||None|Vigan.09G182800.01), DOWNSTREAM(|4787||None|Vigan.09G182900.01), INTRON(|||None|Vigan.09G182700.01)Vigna nepalensis