Variant information

Chr08:5283867 - 5288944

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
5283869GA291591.771.00UTR_3_PRIME(|293||None|Vigan.08G067600.01)Vigna nepalensis
5283890AG311501.771.00UTR_3_PRIME(|272||None|Vigan.08G067600.01)Vigna nepalensis
5283908AG281266.771.00UTR_3_PRIME(|254||None|Vigan.08G067600.01)Vigna nepalensis
5283935GT381716.771.00UTR_3_PRIME(|227||None|Vigan.08G067600.01)Vigna nepalensis
5283936TC371761.771.00UTR_3_PRIME(|226||None|Vigan.08G067600.01)Vigna nepalensis
5283939GA401771.771.00UTR_3_PRIME(|223||None|Vigan.08G067600.01)Vigna nepalensis
5283951AG371614.771.00UTR_3_PRIME(|211||None|Vigan.08G067600.01)Vigna nepalensis
5284011TC391726.771.00UTR_3_PRIME(|151||None|Vigan.08G067600.01)Vigna nepalensis
5284013TG391726.771.00UTR_3_PRIME(|149||None|Vigan.08G067600.01)Vigna nepalensis
5284038GA301151.771.00UTR_3_PRIME(|124||None|Vigan.08G067600.01)Vigna nepalensis
5284064AG321312.771.00UTR_3_PRIME(|98||None|Vigan.08G067600.01)Vigna nepalensis
5284126TC371542.771.00UTR_3_PRIME(|36||None|Vigan.08G067600.01)Vigna nepalensis
5284158TA391554.771.00UTR_3_PRIME(|4||None|Vigan.08G067600.01)Vigna nepalensis
5284302TC391431.771.00NON_SYNONYMOUS_CODING(MISSENSE|Aag/Gag|K297E|None|Vigan.08G067600.01)Vigna nepalensis
5284457GA693068.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5284461AG672996.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5284473CT652529.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5284526AC732827.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285055AT582317.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285274AC512032.771.00NON_SYNONYMOUS_CODING(MISSENSE|Tct/Gct|S216A|None|Vigan.08G067600.01)Vigna nepalensis
5285330AG622470.771.00INTRON(|||None|Vigan.08G067600.01), SPLICE_SITE_REGION(|||None|Vigan.08G067600.01)Vigna nepalensis
5285391GT682655.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285435CA592761.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285442GA592671.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285444TC562749.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285453AC562540.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285469GC542400.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285472GA522329.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285635TC522063.771.00SYNONYMOUS_CODING(SILENT|agA/agG|R174|None|Vigan.08G067600.01)Vigna nepalensis
5285688CT562107.771.00NON_SYNONYMOUS_CODING(MISSENSE|Gac/Aac|D157N|None|Vigan.08G067600.01)Vigna nepalensis
5285731AG532062.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285804CT602349.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285835TA632298.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285846TA582162.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285876CA542170.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285891AG542470.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5285892AC562470.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286030GT401657.771.00SYNONYMOUS_CODING(SILENT|Cga/Aga|R126|None|Vigan.08G067600.01)Vigna nepalensis
5286159TG461832.771.00NON_SYNONYMOUS_CODING(MISSENSE|Aaa/Caa|K83Q|None|Vigan.08G067600.01)Vigna nepalensis
5286233GA572540.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286237GT562510.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286270AG582151.770.98NON_SYNONYMOUS_CODING(MISSENSE|aTa/aCa|I73T|None|Vigan.08G067600.01)Vigna nepalensis
5286430CT441746.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286524AC532088.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286567TA622734.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286595AG753089.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286651GA682777.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286755AC702849.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286801AT512222.770.98INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286802TG492222.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286823TC452021.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286857AG381764.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286874AC522220.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286917CT622726.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5287183AT451906.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5287304GC522061.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5287409TC512311.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5287412GA522372.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5287421TA532296.731.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5287549TG662723.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5287594GA622449.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5287942TC401542.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5287987AT361590.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5288007AG371665.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5288051CT301392.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5288059CA341489.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5288241GA371601.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5288510CA411632.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5288523TA401639.771.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5288907TA411683.771.00START_GAINED(|||None|Vigan.08G067600.01), UTR_5_PRIME(|148||None|Vigan.08G067600.01)Vigna nepalensis
5288934CA431718.771.00UTR_5_PRIME(|175||None|Vigan.08G067600.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
5283897CTC311402.731.00UTR_3_PRIME(|264||None|Vigan.08G067600.01)Vigna nepalensis
5284124GTG351533.731.00UTR_3_PRIME(|37||None|Vigan.08G067600.01)Vigna nepalensis
5285427AAATG582641.731.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286556GAG542463.731.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286937GGA612687.731.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5286959TTAA451727.731.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5287705CAGTTTCTTAGCATCTC652852.731.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5288014TTA351515.731.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5288215TAT331091.731.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5288233TTAATATA321672.731.00INTRON(|||None|Vigan.08G067600.01)Vigna nepalensis
5288802CCA381207.731.00UTR_5_PRIME(|44||None|Vigan.08G067600.01)Vigna nepalensis