Variant information

Chr06:37113493 - 37115368

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
37113541TC752858.771.00DOWNSTREAM(|1401||None|Vigan.06G246600.01), DOWNSTREAM(|2462||None|Vigan.06G246800.01), UTR_5_PRIME(|252||None|Vigan.06G246700.01)Vigna nepalensis
37113562CT81354.770.16DOWNSTREAM(|1422||None|Vigan.06G246600.01), DOWNSTREAM(|2441||None|Vigan.06G246800.01), UTR_5_PRIME(|231||None|Vigan.06G246700.01)Vigna nepalensis
37113564AG81354.770.17DOWNSTREAM(|1424||None|Vigan.06G246600.01), DOWNSTREAM(|2439||None|Vigan.06G246800.01), START_GAINED(|||None|Vigan.06G246700.01), UTR_5_PRIME(|229||None|Vigan.06G246700.01)Vigna nepalensis
37113565CT81357.770.17DOWNSTREAM(|1425||None|Vigan.06G246600.01), DOWNSTREAM(|2438||None|Vigan.06G246800.01), START_GAINED(|||None|Vigan.06G246700.01), UTR_5_PRIME(|228||None|Vigan.06G246700.01)Vigna nepalensis
37113598TC80708.770.28DOWNSTREAM(|1458||None|Vigan.06G246600.01), DOWNSTREAM(|2405||None|Vigan.06G246800.01), UTR_5_PRIME(|195||None|Vigan.06G246700.01)Vigna nepalensis
37113606GA77582.770.23DOWNSTREAM(|1466||None|Vigan.06G246600.01), DOWNSTREAM(|2397||None|Vigan.06G246800.01), UTR_5_PRIME(|187||None|Vigan.06G246700.01)Vigna nepalensis
37113627GA74642.770.27DOWNSTREAM(|1487||None|Vigan.06G246600.01), DOWNSTREAM(|2376||None|Vigan.06G246800.01), UTR_5_PRIME(|166||None|Vigan.06G246700.01)Vigna nepalensis
37113644AG81618.770.25DOWNSTREAM(|1504||None|Vigan.06G246600.01), DOWNSTREAM(|2359||None|Vigan.06G246800.01), UTR_5_PRIME(|149||None|Vigan.06G246700.01)Vigna nepalensis
37113648TC78576.770.22DOWNSTREAM(|1508||None|Vigan.06G246600.01), DOWNSTREAM(|2355||None|Vigan.06G246800.01), UTR_5_PRIME(|145||None|Vigan.06G246700.01)Vigna nepalensis
37113740CA92791.770.26DOWNSTREAM(|1600||None|Vigan.06G246600.01), DOWNSTREAM(|2263||None|Vigan.06G246800.01), START_GAINED(|||None|Vigan.06G246700.01), UTR_5_PRIME(|53||None|Vigan.06G246700.01)Vigna nepalensis
37113772TC92388.770.18DOWNSTREAM(|1632||None|Vigan.06G246600.01), DOWNSTREAM(|2231||None|Vigan.06G246800.01), UTR_5_PRIME(|21||None|Vigan.06G246700.01)Vigna nepalensis
37113847GT84599.770.21DOWNSTREAM(|1707||None|Vigan.06G246600.01), DOWNSTREAM(|2156||None|Vigan.06G246800.01), NON_SYNONYMOUS_CODING(MISSENSE|Gct/Tct|A19S|None|Vigan.06G246700.01)Vigna nepalensis
37113867CT89958.770.30DOWNSTREAM(|1727||None|Vigan.06G246600.01), DOWNSTREAM(|2136||None|Vigan.06G246800.01), SYNONYMOUS_CODING(SILENT|ctC/ctT|L25|None|Vigan.06G246700.01)Vigna nepalensis
37114181GA92999.770.34DOWNSTREAM(|1822||None|Vigan.06G246800.01), DOWNSTREAM(|2041||None|Vigan.06G246600.01), INTRON(|||None|Vigan.06G246700.01)Vigna nepalensis
37114196TC78529.770.23DOWNSTREAM(|1807||None|Vigan.06G246800.01), DOWNSTREAM(|2056||None|Vigan.06G246600.01), INTRON(|||None|Vigan.06G246700.01)Vigna nepalensis
37114203GC79400.770.18DOWNSTREAM(|1800||None|Vigan.06G246800.01), DOWNSTREAM(|2063||None|Vigan.06G246600.01), INTRON(|||None|Vigan.06G246700.01)Vigna nepalensis
37115119GT943923.771.00DOWNSTREAM(|2979||None|Vigan.06G246600.01), DOWNSTREAM(|884||None|Vigan.06G246800.01), UTR_3_PRIME(|36||None|Vigan.06G246700.01)Vigna nepalensis
37115133CT951910.770.54DOWNSTREAM(|2993||None|Vigan.06G246600.01), DOWNSTREAM(|870||None|Vigan.06G246800.01), UTR_3_PRIME(|50||None|Vigan.06G246700.01)Vigna nepalensis
37115147CA901434.770.52DOWNSTREAM(|3007||None|Vigan.06G246600.01), DOWNSTREAM(|856||None|Vigan.06G246800.01), UTR_3_PRIME(|64||None|Vigan.06G246700.01)Vigna nepalensis
37115229TC672651.770.97DOWNSTREAM(|3089||None|Vigan.06G246600.01), DOWNSTREAM(|774||None|Vigan.06G246800.01), UTR_3_PRIME(|146||None|Vigan.06G246700.01)Vigna nepalensis
37115307AT532095.771.00DOWNSTREAM(|3167||None|Vigan.06G246600.01), DOWNSTREAM(|696||None|Vigan.06G246800.01), UTR_3_PRIME(|224||None|Vigan.06G246700.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
37115125TTA961845.730.50DOWNSTREAM(|2986||None|Vigan.06G246600.01), DOWNSTREAM(|877||None|Vigan.06G246800.01), UTR_3_PRIME(|43||None|Vigan.06G246700.01)Vigna nepalensis