Variant information

Chr03:2520296 - 2525260

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
2520356CT532032.771.00UPSTREAM(|1738||None|Vigan.03G032400.01), UTR_5_PRIME(|11||None|Vigan.03G032600.01)Vigna nepalensis
2520479TG662557.771.00NON_SYNONYMOUS_CODING(MISSENSE|cTg/cGg|L38R|None|Vigan.03G032600.01), UPSTREAM(|1861||None|Vigan.03G032400.01)Vigna nepalensis
2520498TC702653.771.00SYNONYMOUS_CODING(SILENT|gcT/gcC|A44|None|Vigan.03G032600.01), UPSTREAM(|1880||None|Vigan.03G032400.01)Vigna nepalensis
2520527AC722656.771.00INTRON(|||None|Vigan.03G032600.01), UPSTREAM(|1909||None|Vigan.03G032400.01)Vigna nepalensis
2520574AT742838.771.00INTRON(|||None|Vigan.03G032600.01), UPSTREAM(|1956||None|Vigan.03G032400.01)Vigna nepalensis
2521035CT712838.771.00INTRON(|||None|Vigan.03G032600.01), UPSTREAM(|2417||None|Vigan.03G032400.01)Vigna nepalensis
2521605CG491954.771.00SYNONYMOUS_CODING(SILENT|tcC/tcG|S225|None|Vigan.03G032600.01), UPSTREAM(|2987||None|Vigan.03G032400.01)Vigna nepalensis
2521686CT632504.771.00SYNONYMOUS_CODING(SILENT|gtC/gtT|V252|None|Vigan.03G032600.01), UPSTREAM(|3068||None|Vigan.03G032400.01)Vigna nepalensis
2521825TA632805.771.00INTRON(|||None|Vigan.03G032600.01), UPSTREAM(|3207||None|Vigan.03G032400.01)Vigna nepalensis
2521827TA632805.771.00INTRON(|||None|Vigan.03G032600.01), UPSTREAM(|3209||None|Vigan.03G032400.01)Vigna nepalensis
2522562GA471881.771.00NON_SYNONYMOUS_CODING(MISSENSE|Gta/Ata|V409I|None|Vigan.03G032600.01), UPSTREAM(|3944||None|Vigan.03G032400.01)Vigna nepalensis
2524099AG532152.771.00UTR_3_PRIME(|1442||None|Vigan.03G032600.01)Vigna nepalensis
2525124GT391576.771.00UPSTREAM(|4585||None|Vigan.03G032700.01), UTR_3_PRIME(|2467||None|Vigan.03G032600.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
2521784AAC612799.731.00INTRON(|||None|Vigan.03G032600.01), UPSTREAM(|3167||None|Vigan.03G032400.01)Vigna nepalensis
2521786ATA642799.731.00INTRON(|||None|Vigan.03G032600.01), UPSTREAM(|3169||None|Vigan.03G032400.01)Vigna nepalensis