Variant information

Chr01:23670044 - 23684290

Filter



 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
23670392TC522158.771.00DOWNSTREAM(|1519||None|Vigan.01G192600.01), INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|3520||None|Vigan.01G192500.01)Vigna nepalensis
23670470AG381569.771.00DOWNSTREAM(|1597||None|Vigan.01G192600.01), INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|3598||None|Vigan.01G192500.01)Vigna nepalensis
23671903CA682818.771.00DOWNSTREAM(|3030||None|Vigan.01G192600.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23672462AT552112.771.00DOWNSTREAM(|3589||None|Vigan.01G192600.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23672715AG522025.771.00DOWNSTREAM(|3842||None|Vigan.01G192600.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23672785TG512123.771.00DOWNSTREAM(|3912||None|Vigan.01G192600.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23673715AG542091.771.00DOWNSTREAM(|4842||None|Vigan.01G192600.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23674324TC682554.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23674386TC642454.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23674647CT431584.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23674678CG411531.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23674902CA381587.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23675057GA562216.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23675094TC451781.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23675324AG522137.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23675602TC532045.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23675617TG511988.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23675786AC341314.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23675880TG512117.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23676099CT491828.770.96INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23676204AT461737.771.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23676457TC291045.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|4951||None|Vigan.01G192800.01)Vigna nepalensis
23676707AG461801.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|4701||None|Vigan.01G192800.01)Vigna nepalensis
23676724CT471920.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|4684||None|Vigan.01G192800.01)Vigna nepalensis
23676822GT642331.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|4586||None|Vigan.01G192800.01)Vigna nepalensis
23676861GA552163.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|4547||None|Vigan.01G192800.01)Vigna nepalensis
23677048AG672724.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|4360||None|Vigan.01G192800.01)Vigna nepalensis
23677098AT612471.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|4310||None|Vigan.01G192800.01)Vigna nepalensis
23677297TC612502.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|4111||None|Vigan.01G192800.01)Vigna nepalensis
23677508CT642641.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|3900||None|Vigan.01G192800.01)Vigna nepalensis
23678223GA511911.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|3185||None|Vigan.01G192800.01)Vigna nepalensis
23678368AT421574.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|3040||None|Vigan.01G192800.01)Vigna nepalensis
23678508AT17726.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|2900||None|Vigan.01G192800.01)Vigna nepalensis
23678515AG16691.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|2893||None|Vigan.01G192800.01)Vigna nepalensis
23678731TC491857.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|2677||None|Vigan.01G192800.01)Vigna nepalensis
23678769GA521991.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|2639||None|Vigan.01G192800.01)Vigna nepalensis
23678959CT441821.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|2449||None|Vigan.01G192800.01)Vigna nepalensis
23679163GT501986.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|2245||None|Vigan.01G192800.01)Vigna nepalensis
23679180AG512117.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|2228||None|Vigan.01G192800.01)Vigna nepalensis
23679458GC572505.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|1950||None|Vigan.01G192800.01)Vigna nepalensis
23679469TA552500.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|1939||None|Vigan.01G192800.01)Vigna nepalensis
23679520AT572340.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|1888||None|Vigan.01G192800.01)Vigna nepalensis
23679622CA512109.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|1786||None|Vigan.01G192800.01)Vigna nepalensis
23679762CT602348.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|1646||None|Vigan.01G192800.01)Vigna nepalensis
23680197CG632719.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|1211||None|Vigan.01G192800.01)Vigna nepalensis
23680208AC562551.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|1200||None|Vigan.01G192800.01)Vigna nepalensis
23680447AT552060.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|961||None|Vigan.01G192800.01)Vigna nepalensis
23680501TC491997.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|907||None|Vigan.01G192800.01)Vigna nepalensis
23680554GC461815.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|854||None|Vigan.01G192800.01)Vigna nepalensis
23680571CA511966.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|837||None|Vigan.01G192800.01)Vigna nepalensis
23680597AG461837.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|811||None|Vigan.01G192800.01)Vigna nepalensis
23680655CT391549.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|753||None|Vigan.01G192800.01)Vigna nepalensis
23680699CA411714.770.95INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|709||None|Vigan.01G192800.01)Vigna nepalensis
23680700GA431714.770.95INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|708||None|Vigan.01G192800.01)Vigna nepalensis
23681023GA421853.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|385||None|Vigan.01G192800.01)Vigna nepalensis
23681024AG421853.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|384||None|Vigan.01G192800.01)Vigna nepalensis
23681028GT411851.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|380||None|Vigan.01G192800.01)Vigna nepalensis
23681143AT481949.771.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|265||None|Vigan.01G192800.01)Vigna nepalensis
23681457TC572288.771.00EXON(|||None|Vigan.01G192800.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23681561TC481998.771.00EXON(|||None|Vigan.01G192800.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23681922TC562267.771.00EXON(|||None|Vigan.01G192800.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23683003GT602328.771.00DOWNSTREAM(|750||None|Vigan.01G192800.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23683199TA572287.771.00DOWNSTREAM(|946||None|Vigan.01G192800.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23683539CG572339.771.00DOWNSTREAM(|1286||None|Vigan.01G192800.01), NON_SYNONYMOUS_CODING(MISSENSE|tCc/tGc|S420C|None|Vigan.01G192700.01)Vigna nepalensis
23683640TG522119.771.00DOWNSTREAM(|1387||None|Vigan.01G192800.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
23671743GTCG572511.731.00DOWNSTREAM(|2871||None|Vigan.01G192600.01), INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|4872||None|Vigan.01G192500.01)Vigna nepalensis
23672415CCAAAATT371740.731.00DOWNSTREAM(|3543||None|Vigan.01G192600.01), INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23674208TCGT492156.731.00INTRON(|||None|Vigan.01G192700.01)Vigna nepalensis
23676916GGTA502168.731.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|4491||None|Vigan.01G192800.01)Vigna nepalensis
23677444CCT632195.731.00INTRON(|||None|Vigan.01G192700.01), UPSTREAM(|3963||None|Vigan.01G192800.01)Vigna nepalensis