GBrowse Details

Vigan.11G248000.01

Basic Information:
Name: Vigan.11G248000.01
Multiple alignment
Variant Information
Position: Chr11:37065749..37069537 (- strand)
Length: 3789
Functional Information:
Description: Similar to Uncharacterized protein. [I1L4K3, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:13.33,13.27,8.62,9.85,7.15,7.84,13.49,8.45
Arabidopsis thaliana homolog: AT4G28980.2
Automatic updates:
Name: NM_001348965 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max CDK-activating kinase (LOC548056), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:37065749..37067465 (- strand)
Length: 1717
Type: three_prime_UTR
Position: Chr11:37067466..37068383 (- strand)
Length: 918
Type: CDS
Position: Chr11:37068871..37069338 (- strand)
Length: 468
Type: CDS
Position: Chr11:37069339..37069537 (- strand)
Length: 199
Type: five_prime_UTR

>Vigan.11G248000.01 class=Sequence position=Chr11:37065749..37069537 (- strand)
GTGATAAAAC CAGACAATCC CAAACGTAAA AGAAACATTT TCCTAAATAC AACAATTTAG AAAAAGACAA AGCAAAAAAA
TAGCGTGAAA AAAAGAGTGA AACATTCAGA CCCAAAGACC ATAGCCATAG TCAACACAGT TTCCTTCGTT CTTCTCAATT
CACCAACTAA AAATTTTTGA AACTTTGCGT TGATCACTGA TGGATCCTCC GGCCAAGAGT TGGAGCATCC ACATGCGCTC
CGAGATAACG GCCAAGTACG ATGTTATTGG TCGGGTCGGG TCGGGTGCCT ACGCCGACGT GTACGAAGGA CGGCGCCGCT
CGGACGGTGC GGCGGTGGCG CTGAAGGAGG TGCACGATTC CCAATCGGCG TCTCGCGAAA TCGAAGCCCT GCGGATCCTG
AAAGGGTCCC AAAACGTGGT CGTTCTGCAC GAGTTCTTCT GGCGCGAGGA CGAGGACGCG GTCCTCGTGC TCGAGTTTCT
CGGAACCGAC CTCGCCGCCG TGATCGGAAA AGGTGGTGTC GGAGTCGGTG AGGTTAAGAG GTGGATGGTG CAGGCTCTGA
GTGCTGTGGA TGAGTGCCAC CGGAATATGA TCGTTCATAG AGACTTAAAA CCCGCGAATT TTTTAGTTTC CGATGATGGG
GTGCTCAAGT TAGCAGATTT TGGACAGGTT TAAGGGATAA AGTTTTCGAT TTCGTTTTAA TCTACTTTGG GGTTTTCTTT
TTTGTTTTAT GGGATTGTGT TGGTTACTTT ATCATTACGT GACTTGTTTT TTTTCTTTTC TCTTTTCTTA TTTGATTAAA
GTCATGTGGT TTGTGTTAAT CTATGATCAT GGTGATCGAT CGTATTTCTG TGGCACAGGC TCCTAACCTT GGTTGCAAAT
TTTGATAATT TTTGTTTTGC TGCTGAAACC TGTAGTCGAT GATTCTCTTC TCTATCTAAA GAATTATTTG AATTTGGATA
GGGGAAAATG GAATAGAGGT TGATTTTCAT GATTTATTGA GCAATAAAAA ATCATCTTAT ATGCAACTTC TATGAAACTT
TTGATAAAAA TAAGAAAACT TGCATCATAC TGTACATGAC AATCATCTTC TACCTTTTTC TTTTTGTCTT TGTTTGCTGA
TATATGTGAA TGTTTAGTTT GATTACTTTT TCAGGCAAGG ATACTAGTGG AGTGTGGATT CGATGGTCAC CAGGAAGATG
ATGATGCTTC AAATAGTGAA AGATCACTCC AACAACATCC TGAAGCCATT TCCCAGCTAG ACAACTTAAA TCAAACTGAA
CATGAAAACC CAGATCAGAG AACCTTGAGT CATGAAGAAT ATTTCAGAGT TTTAGATGAG ATGAAAACCA AGAGCTACTC
TTATGACACT GACAAGGAAG CAAATATCCA TGATGGAAAC ACCTCATGTC TTGCAACATG CACAACGAGT GACATAGATG
ATGAACTTTG CAAAGGTTCT TTTACCTATG AAGCTGAGGA GGTGGGAGGG AATGAACTTG GCTGTCTGAC ATCATGTGTT
GGAACACGCT GGTTTCGGGC TCCTGAGTTA CTGTATGGAT CCACAGACTA TGGTGTAGAG GTTGATCTTT GGTCATTGGG
GTGTGTCTTT GCTGAGCTCT TAACATCGAA GCCATTGTTT CCTGGAACAA GTGATGTAGA CCAGCTTAGC AGAATTGTGA
GTGTTTTGGG GAACATTAAT GAGGAAACTT GGCCTGGTTG TCCCAAACTT CCTGATTATG GAAAGATCTC ATTTTTCAAG
GTGGAAAACC CCAGTGGTCT TGAAGCATGC CTGCCCAATT GCACCCCTGA TGAAGTTTCC CTAGTCAAAA GACTGGTTTG
CTATGATCCA GATAAGAGAG CCACAGCAAT GGAGTTGCTT CAAGACAAGT ACTTCAGTGA AGTACCACTT CCTGTTCCAG
TTTCTGAGTT GCGGGTTCCT TTGATTAGTA TTGGACAAGA CAAGGATCGC CCTGGAGGGC ACAATGAAAT GGGTTCTGAT
TCTGATTTGG AGGAGTTTAG AACTTTGAAT ATCACTACAA CTGATTCTGA TTTTTCTATT CAAATACCTT GAACTCGAAG
GATGTGATGC ACCTTGAATA CTGTTTTATA TTTATTTATA AAAAAATGGA ATTCAAGTAG CATCACATTC TTGGGACAGA
ATTTGTCCTG TGTTCTATTG GTATTTTATT TGCTGAATAT CACTAGTGCA ATCCGTGGTT GGATTCTTTG GAATAAGAAT
ATCTTTTGGC AAGAATTCTG AAGAAAGGAT AAAGTATTTA AAAATAAGCT TTATAATAAA ATAGAATTGT TGTTTTACCA
TGCTATCATG TAAAATGTTG CTAAGTGCCA AAATCCTGCA TTCCGGTGAC AAGGACAACG TGTCTATTAT CTAGCCCGTA
GCGTTTAAGC TACGTTCAAT TTATGTCGAC GGGTGAAATT AAGATGCCAA GTTCGAACTA TACTTTTTCC AATCCCATGC
TAGAATTATT CCACCGGAAA ATTGGTCCCT TGTAATATTG GTGATGGACT TTAAAATGTA AAAATAAGTT GTGCTATTCT
ATCTGAAAAT ATGGGCAAAT GTAATTCAAA GCTAATACAA GAATTTTGCA TTTTTCTTTT TTAATTTATT TAAATGGAAG
AGAATGCAAA CAAGAAGCTC TAAACCAGGT TCAAACTTCA AAGATTTATT GAGGAATGAA CCATCAATTT CGTTGATACC
CACTGAGGCA ACTATCCATA AACAGAAAAC AATATCGTTA GGCAAATTTC ATAATTATTT CTTGTGCAAT ATCTTCAGCC
CATTTTCCTC GATATACGCA GTGATAGAAC TCATGCCAGA CTAATCCTTA TCCAAAATGG GTCACAATTC AAGTAATTAA
AAATAATGTC ACGTACAGAC ACAAAATATT ACATGATGAA GTGCTGTAAA TATGTGTATA TAACAGGGTG CATAGATCCC
CCTCGATGAA TATTACACAA GTCATACGTA TGTCTTCCTT TAAGTGGATG CGAAATCAGA GAATCACAAG CCACGAAAAC
ATCAGAAGGG TGTTGTAAGC CGCTATGTAT CCATTACAAA AACAGCCACC CATAATACCT GAAACCTCTT CACTTCAAAT
CTTCGTACTA ATGTTCTATG CCTAGTTCTT GCCTTGGCTT CCCCTTGTAT TGCTAAGCTA GTCAACCAAA ACAGATGAAA
CAATCTGCTC AGCGGAAACT AAGCAAAATT ACAGAAATCA ATGAGTGAAG CTCTAATCTT GGGGAAGAAG TGCAATCTCA
ATTTCATGAA GTGACTTCCC TTTGGTTTCC ACCACATTTC GTTTTACAAA AATTACCGCC ATGATGCAAA AAGTAGCAAA
CATAGAGTAA AGCAGTTGCG GACCGAGTTT CTCCAGCAAA CGCAAGAACA GTAGGCCAAC AAAGAAATTT ATGACCTGTA
CAAGACCATT TAATCTAATG AGAGAAGATT CCGCAAATAC TGACTTTCGA CCTCTTTCTA AGTCATTATG AGATCAGAGA
ATGATAACAG TTTCAGTAGT TTGCAAAGAA GCAGGGAATT TGAGCGGGCC TCGTTTAATT GATTCAACCA AAATGTGTAG
AATCAATAAA GAACCGTAGA ACATAACCGG CCAAACTGAT TCCATTTCAT ATAATAGAAA ATTTCAGAAA AAAATTACCC
AATGCACTGA CATACAGACT GCCATGGCTT TGGCTCTGAT TCGACTTGGA AAGATTTCAG GTAGGAGGAG ACCTGGAACC
GGACCAGCCC CAAGAGCAAA TGTGAAGAC

>Vigan.11G248000.01
GTGATAAAAC CAGACAATCC CAAACGTAAA AGAAACATTT TCCTAAATAC AACAATTTAG AAAAAGACAA AGCAAAAAAA
TAGCGTGAAA AAAAGAGTGA AACATTCAGA CCCAAAGACC ATAGCCATAG TCAACACAGT TTCCTTCGTT CTTCTCAATT
CACCAACTAA AAATTTTTGA AACTTTGCGT TGATCACTGA TGGATCCTCC GGCCAAGAGT TGGAGCATCC ACATGCGCTC
CGAGATAACG GCCAAGTACG ATGTTATTGG TCGGGTCGGG TCGGGTGCCT ACGCCGACGT GTACGAAGGA CGGCGCCGCT
CGGACGGTGC GGCGGTGGCG CTGAAGGAGG TGCACGATTC CCAATCGGCG TCTCGCGAAA TCGAAGCCCT GCGGATCCTG
AAAGGGTCCC AAAACGTGGT CGTTCTGCAC GAGTTCTTCT GGCGCGAGGA CGAGGACGCG GTCCTCGTGC TCGAGTTTCT
CGGAACCGAC CTCGCCGCCG TGATCGGAAA AGGTGGTGTC GGAGTCGGTG AGGTTAAGAG GTGGATGGTG CAGGCTCTGA
GTGCTGTGGA TGAGTGCCAC CGGAATATGA TCGTTCATAG AGACTTAAAA CCCGCGAATT TTTTAGTTTC CGATGATGGG
GTGCTCAAGT TAGCAGATTT TGGACAGGCA AGGATACTAG TGGAGTGTGG ATTCGATGGT CACCAGGAAG ATGATGATGC
TTCAAATAGT GAAAGATCAC TCCAACAACA TCCTGAAGCC ATTTCCCAGC TAGACAACTT AAATCAAACT GAACATGAAA
ACCCAGATCA GAGAACCTTG AGTCATGAAG AATATTTCAG AGTTTTAGAT GAGATGAAAA CCAAGAGCTA CTCTTATGAC
ACTGACAAGG AAGCAAATAT CCATGATGGA AACACCTCAT GTCTTGCAAC ATGCACAACG AGTGACATAG ATGATGAACT
TTGCAAAGGT TCTTTTACCT ATGAAGCTGA GGAGGTGGGA GGGAATGAAC TTGGCTGTCT GACATCATGT GTTGGAACAC
GCTGGTTTCG GGCTCCTGAG TTACTGTATG GATCCACAGA CTATGGTGTA GAGGTTGATC TTTGGTCATT GGGGTGTGTC
TTTGCTGAGC TCTTAACATC GAAGCCATTG TTTCCTGGAA CAAGTGATGT AGACCAGCTT AGCAGAATTG TGAGTGTTTT
GGGGAACATT AATGAGGAAA CTTGGCCTGG TTGTCCCAAA CTTCCTGATT ATGGAAAGAT CTCATTTTTC AAGGTGGAAA
ACCCCAGTGG TCTTGAAGCA TGCCTGCCCA ATTGCACCCC TGATGAAGTT TCCCTAGTCA AAAGACTGGT TTGCTATGAT
CCAGATAAGA GAGCCACAGC AATGGAGTTG CTTCAAGACA AGTACTTCAG TGAAGTACCA CTTCCTGTTC CAGTTTCTGA
GTTGCGGGTT CCTTTGATTA GTATTGGACA AGACAAGGAT CGCCCTGGAG GGCACAATGA AATGGGTTCT GATTCTGATT
TGGAGGAGTT TAGAACTTTG AATATCACTA CAACTGATTC TGATTTTTCT ATTCAAATAC CTTGAACTCG AAGGATGTGA
TGCACCTTGA ATACTGTTTT ATATTTATTT ATAAAAAAAT GGAATTCAAG TAGCATCACA TTCTTGGGAC AGAATTTGTC
CTGTGTTCTA TTGGTATTTT ATTTGCTGAA TATCACTAGT GCAATCCGTG GTTGGATTCT TTGGAATAAG AATATCTTTT
GGCAAGAATT CTGAAGAAAG GATAAAGTAT TTAAAAATAA GCTTTATAAT AAAATAGAAT TGTTGTTTTA CCATGCTATC
ATGTAAAATG TTGCTAAGTG CCAAAATCCT GCATTCCGGT GACAAGGACA ACGTGTCTAT TATCTAGCCC GTAGCGTTTA
AGCTACGTTC AATTTATGTC GACGGGTGAA ATTAAGATGC CAAGTTCGAA CTATACTTTT TCCAATCCCA TGCTAGAATT
ATTCCACCGG AAAATTGGTC CCTTGTAATA TTGGTGATGG ACTTTAAAAT GTAAAAATAA GTTGTGCTAT TCTATCTGAA
AATATGGGCA AATGTAATTC AAAGCTAATA CAAGAATTTT GCATTTTTCT TTTTTAATTT ATTTAAATGG AAGAGAATGC
AAACAAGAAG CTCTAAACCA GGTTCAAACT TCAAAGATTT ATTGAGGAAT GAACCATCAA TTTCGTTGAT ACCCACTGAG
GCAACTATCC ATAAACAGAA AACAATATCG TTAGGCAAAT TTCATAATTA TTTCTTGTGC AATATCTTCA GCCCATTTTC
CTCGATATAC GCAGTGATAG AACTCATGCC AGACTAATCC TTATCCAAAA TGGGTCACAA TTCAAGTAAT TAAAAATAAT
GTCACGTACA GACACAAAAT ATTACATGAT GAAGTGCTGT AAATATGTGT ATATAACAGG GTGCATAGAT CCCCCTCGAT
GAATATTACA CAAGTCATAC GTATGTCTTC CTTTAAGTGG ATGCGAAATC AGAGAATCAC AAGCCACGAA AACATCAGAA
GGGTGTTGTA AGCCGCTATG TATCCATTAC AAAAACAGCC ACCCATAATA CCTGAAACCT CTTCACTTCA AATCTTCGTA
CTAATGTTCT ATGCCTAGTT CTTGCCTTGG CTTCCCCTTG TATTGCTAAG CTAGTCAACC AAAACAGATG AAACAATCTG
CTCAGCGGAA ACTAAGCAAA ATTACAGAAA TCAATGAGTG AAGCTCTAAT CTTGGGGAAG AAGTGCAATC TCAATTTCAT
GAAGTGACTT CCCTTTGGTT TCCACCACAT TTCGTTTTAC AAAAATTACC GCCATGATGC AAAAAGTAGC AAACATAGAG
TAAAGCAGTT GCGGACCGAG TTTCTCCAGC AAACGCAAGA ACAGTAGGCC AACAAAGAAA TTTATGACCT GTACAAGACC
ATTTAATCTA ATGAGAGAAG ATTCCGCAAA TACTGACTTT CGACCTCTTT CTAAGTCATT ATGAGATCAG AGAATGATAA
CAGTTTCAGT AGTTTGCAAA GAAGCAGGGA ATTTGAGCGG GCCTCGTTTA ATTGATTCAA CCAAAATGTG TAGAATCAAT
AAAGAACCGT AGAACATAAC CGGCCAAACT GATTCCATTT CATATAATAG AAAATTTCAG AAAAAAATTA CCCAATGCAC
TGACATACAG ACTGCCATGG CTTTGGCTCT GATTCGACTT GGAAAGATTT CAGGTAGGAG GAGACCTGGA ACCGGACCAG
CCCCAAGAGC AAATGTGAAG AC

>Vigan.11G248000.01
ATGGATCCTC CGGCCAAGAG TTGGAGCATC CACATGCGCT CCGAGATAAC GGCCAAGTAC GATGTTATTG GTCGGGTCGG
GTCGGGTGCC TACGCCGACG TGTACGAAGG ACGGCGCCGC TCGGACGGTG CGGCGGTGGC GCTGAAGGAG GTGCACGATT
CCCAATCGGC GTCTCGCGAA ATCGAAGCCC TGCGGATCCT GAAAGGGTCC CAAAACGTGG TCGTTCTGCA CGAGTTCTTC
TGGCGCGAGG ACGAGGACGC GGTCCTCGTG CTCGAGTTTC TCGGAACCGA CCTCGCCGCC GTGATCGGAA AAGGTGGTGT
CGGAGTCGGT GAGGTTAAGA GGTGGATGGT GCAGGCTCTG AGTGCTGTGG ATGAGTGCCA CCGGAATATG ATCGTTCATA
GAGACTTAAA ACCCGCGAAT TTTTTAGTTT CCGATGATGG GGTGCTCAAG TTAGCAGATT TTGGACAGGC AAGGATACTA
GTGGAGTGTG GATTCGATGG TCACCAGGAA GATGATGATG CTTCAAATAG TGAAAGATCA CTCCAACAAC ATCCTGAAGC
CATTTCCCAG CTAGACAACT TAAATCAAAC TGAACATGAA AACCCAGATC AGAGAACCTT GAGTCATGAA GAATATTTCA
GAGTTTTAGA TGAGATGAAA ACCAAGAGCT ACTCTTATGA CACTGACAAG GAAGCAAATA TCCATGATGG AAACACCTCA
TGTCTTGCAA CATGCACAAC GAGTGACATA GATGATGAAC TTTGCAAAGG TTCTTTTACC TATGAAGCTG AGGAGGTGGG
AGGGAATGAA CTTGGCTGTC TGACATCATG TGTTGGAACA CGCTGGTTTC GGGCTCCTGA GTTACTGTAT GGATCCACAG
ACTATGGTGT AGAGGTTGAT CTTTGGTCAT TGGGGTGTGT CTTTGCTGAG CTCTTAACAT CGAAGCCATT GTTTCCTGGA
ACAAGTGATG TAGACCAGCT TAGCAGAATT GTGAGTGTTT TGGGGAACAT TAATGAGGAA ACTTGGCCTG GTTGTCCCAA
ACTTCCTGAT TATGGAAAGA TCTCATTTTT CAAGGTGGAA AACCCCAGTG GTCTTGAAGC ATGCCTGCCC AATTGCACCC
CTGATGAAGT TTCCCTAGTC AAAAGACTGG TTTGCTATGA TCCAGATAAG AGAGCCACAG CAATGGAGTT GCTTCAAGAC
AAGTACTTCA GTGAAGTACC ACTTCCTGTT CCAGTTTCTG AGTTGCGGGT TCCTTTGATT AGTATTGGAC AAGACAAGGA
TCGCCCTGGA GGGCACAATG AAATGGGTTC TGATTCTGAT TTGGAGGAGT TTAGAACTTT GAATATCACT ACAACTGATT
CTGATTTTTC TATTCAAATA CCTTGA

>Vigan.11G248000.01
MDPPAKSWSI HMRSEITAKY DVIGRVGSGA YADVYEGRRR SDGAAVALKE VHDSQSASRE IEALRILKGS QNVVVLHEFF
WREDEDAVLV LEFLGTDLAA VIGKGGVGVG EVKRWMVQAL SAVDECHRNM IVHRDLKPAN FLVSDDGVLK LADFGQARIL
VECGFDGHQE DDDASNSERS LQQHPEAISQ LDNLNQTEHE NPDQRTLSHE EYFRVLDEMK TKSYSYDTDK EANIHDGNTS
CLATCTTSDI DDELCKGSFT YEAEEVGGNE LGCLTSCVGT RWFRAPELLY GSTDYGVEVD LWSLGCVFAE LLTSKPLFPG
TSDVDQLSRI VSVLGNINEE TWPGCPKLPD YGKISFFKVE NPSGLEACLP NCTPDEVSLV KRLVCYDPDK RATAMELLQD
KYFSEVPLPV PVSELRVPLI SIGQDKDRPG GHNEMGSDSD LEEFRTLNIT TTDSDFSIQI P*