GBrowse Details

Vigan.11G237200.01

Basic Information:
Name: Vigan.11G237200.01
Multiple alignment
Variant Information
Position: Chr11:36198596..36200734 (+ strand)
Length: 2139
Functional Information:
Description: Similar to uncharacterized LOC101219468. [XP_004154918.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:239.40,107.41,49.05,75.33,119.02,52.79,221.68,42.07
Automatic updates:
Name: NM_001251303 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527326 (LOC100527326), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001251499 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499691 (LOC100499691), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:36198596..36199242 (+ strand)
Length: 647
Type: five_prime_UTR
Position: Chr11:36199243..36199538 (+ strand)
Length: 296
Type: CDS
Position: Chr11:36199706..36199769 (+ strand)
Length: 64
Type: CDS
Position: Chr11:36199922..36200188 (+ strand)
Length: 267
Type: CDS
Position: Chr11:36200189..36200734 (+ strand)
Length: 546
Type: three_prime_UTR

>Vigan.11G237200.01 class=Sequence position=Chr11:36198596..36200734 (+ strand)
TCCTTATGCA CCGTACAAGA AGAGGACAGA GAACACAACA CAACACAGAG GTTCATGAAT GTAGGAAGGT CAAAAAGGAA
AAAACACACA CTCCCTGTCC CTTGCCATTT CCATCACATG TCTCATCTAT TGCCACGTCA CCCTATCAAA AGTCTAACCC
CACTATTGAT TTATCACATG GTCTATGAAT GCGGTCTCAT GTTATAACCC CTGCACCCTG TTTCACTTTA TCATTCTCCC
GTGTTTTTCT TCTCTTTTTC CCACAGTCAT CTGCTATGAA TACCCAGCCA CCTCTTTTCC CTTTCTCGCT CTGGTTGTTC
CCTTGATACA TTCACCCAGT TTTTCTGTCC TCTTTTCCTC TTGGAGGAGC CTCTGAGTCT GCTCAGGTAC TCTCTCTCTC
TTTTTCTCTC TCTAAAACTA AGGCAGCTTT TGAAAGCTTA TGCTTTTGCA AAGATTTCAA ATCTGGGTTA AGGTTGTTGG
GAATATTTTG TTTGCTTCAA AGTCTTGAAT TTAAAGGCTT TTAACAAAAG GGTCTTTGAG TATTTTGTTA TTTGTCTCAA
ATTCTACGAT TTGGTTGTGT TCTAGGAGTT TTGGGGAGAA AAGAAAGAAA ATTTCGAAGA AAGGGGTTTC TTTGTGTGTT
TTGGTTGATG AATTTTTTAG ATTTGGTTTA TTTTTGTTCA GATTTGAGAG CAACCTGGGG AAAAATAATT GATTTGTTTG
TGTTTGATGT TGCAGGTGTT CCTTGTCAAG ATCCTCGGTT GAGTTGTGAA GGGAAAAAAG GAAAAAACAT GAATCAGTGT
GGTTATCAGC AGAAGAAGAC CTTGACAACC TGCGAGGAGA TGAGGATGGA ATCAGTGGTG TGCCCTAAAC CTCGAAGATT
GGGCCTCATG AACCACTCAA CCTTTGATAA CCACATCAGA CCCTTCAGGC CACCCTTTAT CAAGTATTCA CTCTTCTGTT
TTCTTTCTTT TTTTAATTAA TATATATATA TATATATATA TATATATATA TATATATATC TAATTTCTTA ATTTTGCTGT
GGATTTTTTT GGTCTAATCA ATTCATTTTG TAAAATTTCT GACTTTATAT TTGTTGGCTA AAATCAACAG CTACCAATCA
GAAATTGAAG ATTCAGGAGT TGGGGCTGAG CTTATGGACA TCATTCTCCC TAAGGTATAT TTTTTTTTCT GTCTCAATCT
GAAAAGAAAG TTTCTTTCTT TGAGATAACA TCTCCATCAT GTGGTTTGGG TGTTGTTTTT GTTGTTGTTG AGTGAAAGAA
GTGTGAAATC TAACGAAAGA TTGGTTTAAT TTGGTGTGTT TTGCAGAGAT CTGGAGGGCA ATTGGCCTCA TCACCCCCAT
TTTACTGTGG ATCTCCACCC AGCAGAGCCT CAAACCCTGT GATTCAAGAT GAGCAATTTG GTAATGGTAT TGAGAATTTT
GGTCCATTCA GCTTGGCACC CCTTTCACCA TCTTCCTCAG CCAGAGGTTG TGTGAGGATG AAGTTTGGTC ACACCCCAGC
TGCAGTGAGG ATCGAAGGTT TTGATTGCCT CAGCAGGGAT AGGCGCAACT GCAGCATTTC TGCCGTTGCT TAATTCAATT
TTAAACAGAG AAAAAGGAAA GCAGAAGAGT CAGAAAGGAG GATTAAGAAT CACCAAAGTT CTAAGAGCAG AGGAGATTTT
TGGGACTAAG GAGCTAATCT TAATTTTAAA TCTTATTTGT ATTATATGTA TATACTGGTC TTATGGAAGT TGTTGATGAG
TTAATTAAGG TGTCGTCATG TATAATTGAG AGAGATGGTG GAAATTTTCT CTTCTTCCTA GTTTTATCCT TTTTGAAGAA
TAATAAAGAA AAGGGAACAA CAACAACAAC AAATCAAGGA AAAGAAAAAG GCAAGCAAAA GTCTTCTTCT TCTCTCTTGT
TAGGTCTATA TATATGATGG AATGAAACTT TCTTGTGAGT TTCATGGATC CAGAGTTTGT AACTTTCATG TCATTTCAAG
CTCAGCTCCT CCTTTTGTAA TTGTATTGTG GAGGAGAAAT TGAGGACTTA TCTTTGGAAT CTTTGTAAAA TATATTTTTT
GTGGGTGCCC TATTTGCAGG TGTCACCTGT TTCAATATAT GAAAGAAATA TTGTTCATA

>Vigan.11G237200.01
TCCTTATGCA CCGTACAAGA AGAGGACAGA GAACACAACA CAACACAGAG GTTCATGAAT GTAGGAAGGT CAAAAAGGAA
AAAACACACA CTCCCTGTCC CTTGCCATTT CCATCACATG TCTCATCTAT TGCCACGTCA CCCTATCAAA AGTCTAACCC
CACTATTGAT TTATCACATG GTCTATGAAT GCGGTCTCAT GTTATAACCC CTGCACCCTG TTTCACTTTA TCATTCTCCC
GTGTTTTTCT TCTCTTTTTC CCACAGTCAT CTGCTATGAA TACCCAGCCA CCTCTTTTCC CTTTCTCGCT CTGGTTGTTC
CCTTGATACA TTCACCCAGT TTTTCTGTCC TCTTTTCCTC TTGGAGGAGC CTCTGAGTCT GCTCAGGTAC TCTCTCTCTC
TTTTTCTCTC TCTAAAACTA AGGCAGCTTT TGAAAGCTTA TGCTTTTGCA AAGATTTCAA ATCTGGGTTA AGGTTGTTGG
GAATATTTTG TTTGCTTCAA AGTCTTGAAT TTAAAGGCTT TTAACAAAAG GGTCTTTGAG TATTTTGTTA TTTGTCTCAA
ATTCTACGAT TTGGTTGTGT TCTAGGAGTT TTGGGGAGAA AAGAAAGAAA ATTTCGAAGA AAGGGGTTTC TTTGTGTGTT
TTGGTTGATG AATTTTTTAG ATTTGGTTTA TTTTTGTTCA GATTTGAGAG CAACCTGGGG AAAAATAATT GATTTGTTTG
TGTTTGATGT TGCAGGTGTT CCTTGTCAAG ATCCTCGGTT GAGTTGTGAA GGGAAAAAAG GAAAAAACAT GAATCAGTGT
GGTTATCAGC AGAAGAAGAC CTTGACAACC TGCGAGGAGA TGAGGATGGA ATCAGTGGTG TGCCCTAAAC CTCGAAGATT
GGGCCTCATG AACCACTCAA CCTTTGATAA CCACATCAGA CCCTTCAGGC CACCCTTTAT CAACTACCAA TCAGAAATTG
AAGATTCAGG AGTTGGGGCT GAGCTTATGG ACATCATTCT CCCTAAGAGA TCTGGAGGGC AATTGGCCTC ATCACCCCCA
TTTTACTGTG GATCTCCACC CAGCAGAGCC TCAAACCCTG TGATTCAAGA TGAGCAATTT GGTAATGGTA TTGAGAATTT
TGGTCCATTC AGCTTGGCAC CCCTTTCACC ATCTTCCTCA GCCAGAGGTT GTGTGAGGAT GAAGTTTGGT CACACCCCAG
CTGCAGTGAG GATCGAAGGT TTTGATTGCC TCAGCAGGGA TAGGCGCAAC TGCAGCATTT CTGCCGTTGC TTAATTCAAT
TTTAAACAGA GAAAAAGGAA AGCAGAAGAG TCAGAAAGGA GGATTAAGAA TCACCAAAGT TCTAAGAGCA GAGGAGATTT
TTGGGACTAA GGAGCTAATC TTAATTTTAA ATCTTATTTG TATTATATGT ATATACTGGT CTTATGGAAG TTGTTGATGA
GTTAATTAAG GTGTCGTCAT GTATAATTGA GAGAGATGGT GGAAATTTTC TCTTCTTCCT AGTTTTATCC TTTTTGAAGA
ATAATAAAGA AAAGGGAACA ACAACAACAA CAAATCAAGG AAAAGAAAAA GGCAAGCAAA AGTCTTCTTC TTCTCTCTTG
TTAGGTCTAT ATATATGATG GAATGAAACT TTCTTGTGAG TTTCATGGAT CCAGAGTTTG TAACTTTCAT GTCATTTCAA
GCTCAGCTCC TCCTTTTGTA ATTGTATTGT GGAGGAGAAA TTGAGGACTT ATCTTTGGAA TCTTTGTAAA ATATATTTTT
TGTGGGTGCC CTATTTGCAG GTGTCACCTG TTTCAATATA TGAAAGAAAT ATTGTTCATA 

>Vigan.11G237200.01
ATGAATTTTT TAGATTTGGT TTATTTTTGT TCAGATTTGA GAGCAACCTG GGGAAAAATA ATTGATTTGT TTGTGTTTGA
TGTTGCAGGT GTTCCTTGTC AAGATCCTCG GTTGAGTTGT GAAGGGAAAA AAGGAAAAAA CATGAATCAG TGTGGTTATC
AGCAGAAGAA GACCTTGACA ACCTGCGAGG AGATGAGGAT GGAATCAGTG GTGTGCCCTA AACCTCGAAG ATTGGGCCTC
ATGAACCACT CAACCTTTGA TAACCACATC AGACCCTTCA GGCCACCCTT TATCAACTAC CAATCAGAAA TTGAAGATTC
AGGAGTTGGG GCTGAGCTTA TGGACATCAT TCTCCCTAAG AGATCTGGAG GGCAATTGGC CTCATCACCC CCATTTTACT
GTGGATCTCC ACCCAGCAGA GCCTCAAACC CTGTGATTCA AGATGAGCAA TTTGGTAATG GTATTGAGAA TTTTGGTCCA
TTCAGCTTGG CACCCCTTTC ACCATCTTCC TCAGCCAGAG GTTGTGTGAG GATGAAGTTT GGTCACACCC CAGCTGCAGT
GAGGATCGAA GGTTTTGATT GCCTCAGCAG GGATAGGCGC AACTGCAGCA TTTCTGCCGT TGCTTAA

>Vigan.11G237200.01
MNFLDLVYFC SDLRATWGKI IDLFVFDVAG VPCQDPRLSC EGKKGKNMNQ CGYQQKKTLT TCEEMRMESV VCPKPRRLGL
MNHSTFDNHI RPFRPPFINY QSEIEDSGVG AELMDIILPK RSGGQLASSP PFYCGSPPSR ASNPVIQDEQ FGNGIENFGP
FSLAPLSPSS SARGCVRMKF GHTPAAVRIE GFDCLSRDRR NCSISAVA*