GBrowse Details

Vigan.11G192800.01

Basic Information:
Name: Vigan.11G192800.01
Multiple alignment
Variant Information
Position: Chr11:31543516..31545880 (+ strand)
Length: 2365
Functional Information:
Description: Similar to Uncharacterized protein. [I1MQ22, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
Molecular Function: chaperone binding (GO:0051087)
InterPro: Ubiquitin domain (IPR000626)
BAG domain (IPR003103)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.81,2.61,47.39,36.33,55.69,24.02,55.45,87.63
Arabidopsis thaliana homolog: AT5G52060.1
Automatic updates:
Name: NM_001255910 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max BAG family molecular chaperone regulator-like protein (LOC100790513), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:31543516..31544119 (+ strand)
Length: 604
Type: five_prime_UTR
Position: Chr11:31544120..31544378 (+ strand)
Length: 259
Type: CDS
Position: Chr11:31544644..31544900 (+ strand)
Length: 257
Type: CDS
Position: Chr11:31544989..31545135 (+ strand)
Length: 147
Type: CDS
Position: Chr11:31545240..31545674 (+ strand)
Length: 435
Type: CDS
Position: Chr11:31545675..31545880 (+ strand)
Length: 206
Type: three_prime_UTR

>Vigan.11G192800.01 class=Sequence position=Chr11:31543516..31545880 (+ strand)
CGTTTTTATA TTATTTTTTT TTTCTGTTTC CATTTCATCA CTTTCTTCTC CCTTTGATTT CTCCACAACA GCAAGGGAGA
ATCAGTTCCT CATCCCTGCA AATTCTTTCC AGATTCTCAC TTTCTTCAAT CTCTTCTCAT CAGTTTCCTT CAGAAAAACG
AAAAACACAG CTTCAGATTG TTCAAGCTCT TTGTTTTTTC CTTGTTCAAG ATTATGCTGT AAAATTCTGA AACTCGCAGG
TTTCAGCCAC ATTTTAGTGA AAAGATCTGT GCCTTGACCC CTGGCAGGTT CACCTTTTGA AGGGGTTGGA GTAGTTCTTC
CTCACAAGCC ATTGATTGGT CCAAGTTTAT TTTTTTTTCT CTCTCTATCC AAGTTCAAAG CTTTTTGGTG TTTTTTATCC
CGTGTCTTTC TCTCTCTTGC TGTGGAATGC TGGGGTCAGA GATTTCTGAG ACATGTTCTT GCAGGCTTTC GGTGAATTGG
GTCAGTGTGG TTTCTGTCAT GGGTGGTAGA GAATCTGAGT CCTCAGAGAT CTAAGCCTCT CCGGTCTTTC CATAAGCACA
CACCCTTTTG TTGCATAGTT GTGAAAGTTA AAGAGTGAGA GAAGATGATG AGGATGAGGA ATAGTGGTGG TAATAACAAT
CATAAGACAA ACGGTCTTTC TTCCATCATG AATGCAGGAG GCTCAGCTGC TTGTAGATCT GAGCCTGGTT CAAAGGAATG
GGAGATGAGA CCAGGTGGAA TGCTGGTTCA GATGAGAACC GCTGATTCGG ATCGGAACCC AGTTCTTGTT CCCACAATTA
GAGTTAGGGT CAAGTACGGT TCAATTTACC ATGAAGTCAA CATTAGTTCT CAAGCTACAT TTGGTAACTC TTCACTTTTT
ATTTATTTTT TCTCAAGTTT TAATGGTTTT TGTTTGCTAG TTATGTTTCT TTACCCTTTT CTTGCGAGAC AAAACTTGGA
CACAAGTTTT TAGGTAATTT TAGTGTTGTT CCTGTTATCT TATAGAAATT AGAGTTTTAC CTTTACATAG ATTTCTTAGT
GAAATTCTAA TTCTGATCGA AGGATAATAC AAAAATTACC CATGTCTAGG TTTTGGTGAA TTTTGTTTTT ATATTTCTGG
GTTTGCAGGG GAGTTGAAGA AGATGTTGTC AGGACCAACT GGGTTACACC ATGAAGACCA AAAGCTGTTT TACAAAGACA
AGGAGAGGGA TTCAAAGGCT TTTCTTGACA TGGTTGGGGT GAAGGATAAA TCCAAGATAG TGCTAGTTGA AGATCCTATT
AGTCAAGAGA AGAGGTTGTT AGAGATAAGG AAGAATGCTA AGATGGAGAA AGCTGCAAAA TCCATCTCAG CAATCAGCTT
GGAAGTAGAC AGGCTTGCAG GGAGGGTATG TATTGTGGTT GCTATTGATA TTACTATGAA TTTTTCTTTT CATTTTTGCA
AAATTTTGAT TATGAATGAT TGGAATTGGT TAGGTATCAG CCTTTGAGTC AATTATTAGC AAAGGTGGGA AAGTTGTGGA
AACAGATGTT CTGAATCTGA TTGAGTTGTT GATGAATCAA TTGCTTAAAT TGGACGGTAT AATGGCTGAT GGGGATGTGA
AATTACAGAG GAAAATGCAG GTAATGTTAG GAATAGGAGA TTCAGATGCA TCATGCTCAT TTGTGTTATT TACAATATCT
CAATTGCCTT CATTCATGGT TCTAAAAAAG CTTAATTTTT GAAGGTAAAA AGAGTTCAAA AGTATGTTGA AACTCTTGAT
CTGCTGAAGG TTAAGAATTC TGTGCCTAGC AGCAATGGAG ACCATGGTGC AGTGCAGCCT CAACAACAGA AGCATTCAAA
TGGGCAGAGG CTGGGAGGTG TTCAAGAGAA ACAACAAAAG CATTCAAATG GACATAATAG GTTAGCCTTA GCACCAATTC
AAGAGCAGCA ACAAGAACAA CCTAGGAACT CAAATGAGAA ATCTCTAGCA CTTTACCAAG AGCAACAACA GCAAACCTCA
AGGAATTCGA CCTCAGAAGT TGTAGTTACC ACAAACTGGG AGTTGTTTGA TTCTGCCCCA CCATTAATCC CTGTGCAGTC
CACATCCCCA CCACAACAAC CCCCCTCAGT GACTCATAAT TCAGGTCCTC CAAAGTTCAA TTGGGAATTC TTCAACTGAG
TACCATACCA CTTGCTTTTA CTTGTGTGGA TGTGATTTGG GTTTGTCTTC CACTTCAGAG TGTTATATGT TTTACATTCT
TTTCTGTATT TAGATTTGTT TACCAACCCC TTATAATCTG TCATTTACTT CACAAATAAA TAGGGTTGCC ATCATAGTCA
TTATCATAAA AAAAAGTTAC ATTTCTGTGA TTTTGGTGTC CACCG

>Vigan.11G192800.01
CGTTTTTATA TTATTTTTTT TTTCTGTTTC CATTTCATCA CTTTCTTCTC CCTTTGATTT CTCCACAACA GCAAGGGAGA
ATCAGTTCCT CATCCCTGCA AATTCTTTCC AGATTCTCAC TTTCTTCAAT CTCTTCTCAT CAGTTTCCTT CAGAAAAACG
AAAAACACAG CTTCAGATTG TTCAAGCTCT TTGTTTTTTC CTTGTTCAAG ATTATGCTGT AAAATTCTGA AACTCGCAGG
TTTCAGCCAC ATTTTAGTGA AAAGATCTGT GCCTTGACCC CTGGCAGGTT CACCTTTTGA AGGGGTTGGA GTAGTTCTTC
CTCACAAGCC ATTGATTGGT CCAAGTTTAT TTTTTTTTCT CTCTCTATCC AAGTTCAAAG CTTTTTGGTG TTTTTTATCC
CGTGTCTTTC TCTCTCTTGC TGTGGAATGC TGGGGTCAGA GATTTCTGAG ACATGTTCTT GCAGGCTTTC GGTGAATTGG
GTCAGTGTGG TTTCTGTCAT GGGTGGTAGA GAATCTGAGT CCTCAGAGAT CTAAGCCTCT CCGGTCTTTC CATAAGCACA
CACCCTTTTG TTGCATAGTT GTGAAAGTTA AAGAGTGAGA GAAGATGATG AGGATGAGGA ATAGTGGTGG TAATAACAAT
CATAAGACAA ACGGTCTTTC TTCCATCATG AATGCAGGAG GCTCAGCTGC TTGTAGATCT GAGCCTGGTT CAAAGGAATG
GGAGATGAGA CCAGGTGGAA TGCTGGTTCA GATGAGAACC GCTGATTCGG ATCGGAACCC AGTTCTTGTT CCCACAATTA
GAGTTAGGGT CAAGTACGGT TCAATTTACC ATGAAGTCAA CATTAGTTCT CAAGCTACAT TTGGGGAGTT GAAGAAGATG
TTGTCAGGAC CAACTGGGTT ACACCATGAA GACCAAAAGC TGTTTTACAA AGACAAGGAG AGGGATTCAA AGGCTTTTCT
TGACATGGTT GGGGTGAAGG ATAAATCCAA GATAGTGCTA GTTGAAGATC CTATTAGTCA AGAGAAGAGG TTGTTAGAGA
TAAGGAAGAA TGCTAAGATG GAGAAAGCTG CAAAATCCAT CTCAGCAATC AGCTTGGAAG TAGACAGGCT TGCAGGGAGG
GTATCAGCCT TTGAGTCAAT TATTAGCAAA GGTGGGAAAG TTGTGGAAAC AGATGTTCTG AATCTGATTG AGTTGTTGAT
GAATCAATTG CTTAAATTGG ACGGTATAAT GGCTGATGGG GATGTGAAAT TACAGAGGAA AATGCAGGTA AAAAGAGTTC
AAAAGTATGT TGAAACTCTT GATCTGCTGA AGGTTAAGAA TTCTGTGCCT AGCAGCAATG GAGACCATGG TGCAGTGCAG
CCTCAACAAC AGAAGCATTC AAATGGGCAG AGGCTGGGAG GTGTTCAAGA GAAACAACAA AAGCATTCAA ATGGACATAA
TAGGTTAGCC TTAGCACCAA TTCAAGAGCA GCAACAAGAA CAACCTAGGA ACTCAAATGA GAAATCTCTA GCACTTTACC
AAGAGCAACA ACAGCAAACC TCAAGGAATT CGACCTCAGA AGTTGTAGTT ACCACAAACT GGGAGTTGTT TGATTCTGCC
CCACCATTAA TCCCTGTGCA GTCCACATCC CCACCACAAC AACCCCCCTC AGTGACTCAT AATTCAGGTC CTCCAAAGTT
CAATTGGGAA TTCTTCAACT GAGTACCATA CCACTTGCTT TTACTTGTGT GGATGTGATT TGGGTTTGTC TTCCACTTCA
GAGTGTTATA TGTTTTACAT TCTTTTCTGT ATTTAGATTT GTTTACCAAC CCCTTATAAT CTGTCATTTA CTTCACAAAT
AAATAGGGTT GCCATCATAG TCATTATCAT AAAAAAAAGT TACATTTCTG TGATTTTGGT GTCCACCG

>Vigan.11G192800.01
ATGATGAGGA TGAGGAATAG TGGTGGTAAT AACAATCATA AGACAAACGG TCTTTCTTCC ATCATGAATG CAGGAGGCTC
AGCTGCTTGT AGATCTGAGC CTGGTTCAAA GGAATGGGAG ATGAGACCAG GTGGAATGCT GGTTCAGATG AGAACCGCTG
ATTCGGATCG GAACCCAGTT CTTGTTCCCA CAATTAGAGT TAGGGTCAAG TACGGTTCAA TTTACCATGA AGTCAACATT
AGTTCTCAAG CTACATTTGG GGAGTTGAAG AAGATGTTGT CAGGACCAAC TGGGTTACAC CATGAAGACC AAAAGCTGTT
TTACAAAGAC AAGGAGAGGG ATTCAAAGGC TTTTCTTGAC ATGGTTGGGG TGAAGGATAA ATCCAAGATA GTGCTAGTTG
AAGATCCTAT TAGTCAAGAG AAGAGGTTGT TAGAGATAAG GAAGAATGCT AAGATGGAGA AAGCTGCAAA ATCCATCTCA
GCAATCAGCT TGGAAGTAGA CAGGCTTGCA GGGAGGGTAT CAGCCTTTGA GTCAATTATT AGCAAAGGTG GGAAAGTTGT
GGAAACAGAT GTTCTGAATC TGATTGAGTT GTTGATGAAT CAATTGCTTA AATTGGACGG TATAATGGCT GATGGGGATG
TGAAATTACA GAGGAAAATG CAGGTAAAAA GAGTTCAAAA GTATGTTGAA ACTCTTGATC TGCTGAAGGT TAAGAATTCT
GTGCCTAGCA GCAATGGAGA CCATGGTGCA GTGCAGCCTC AACAACAGAA GCATTCAAAT GGGCAGAGGC TGGGAGGTGT
TCAAGAGAAA CAACAAAAGC ATTCAAATGG ACATAATAGG TTAGCCTTAG CACCAATTCA AGAGCAGCAA CAAGAACAAC
CTAGGAACTC AAATGAGAAA TCTCTAGCAC TTTACCAAGA GCAACAACAG CAAACCTCAA GGAATTCGAC CTCAGAAGTT
GTAGTTACCA CAAACTGGGA GTTGTTTGAT TCTGCCCCAC CATTAATCCC TGTGCAGTCC ACATCCCCAC CACAACAACC
CCCCTCAGTG ACTCATAATT CAGGTCCTCC AAAGTTCAAT TGGGAATTCT TCAACTGA

>Vigan.11G192800.01
MMRMRNSGGN NNHKTNGLSS IMNAGGSAAC RSEPGSKEWE MRPGGMLVQM RTADSDRNPV LVPTIRVRVK YGSIYHEVNI
SSQATFGELK KMLSGPTGLH HEDQKLFYKD KERDSKAFLD MVGVKDKSKI VLVEDPISQE KRLLEIRKNA KMEKAAKSIS
AISLEVDRLA GRVSAFESII SKGGKVVETD VLNLIELLMN QLLKLDGIMA DGDVKLQRKM QVKRVQKYVE TLDLLKVKNS
VPSSNGDHGA VQPQQQKHSN GQRLGGVQEK QQKHSNGHNR LALAPIQEQQ QEQPRNSNEK SLALYQEQQQ QTSRNSTSEV
VVTTNWELFD SAPPLIPVQS TSPPQQPPSV THNSGPPKFN WEFFN*