GBrowse Details

Vigan.11G108800.01

Basic Information:
Name: Vigan.11G108800.01
Multiple alignment
Variant Information
Position: Chr11:15273415..15277760 (+ strand)
Length: 4346
Functional Information:
Description: Similar to Uncharacterized protein. [E3NYP3, Glycine max]
InterPro: Phosphatidylethanolamine-binding, conserved site (IPR001858)
Phosphatidylethanolamine-binding protein PEBP (IPR008914)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,6.38,36.02,0.00,6.99,0.03, 0.37
Arabidopsis thaliana homolog: AT1G65480.1
Automatic updates:
Name: KJ179953 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max flowering locus T-like protein 2b mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001253256 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phosphatidylethanolamine-binding protein FT2a (GMFT2A), mRNA.
PubMed ID: 29120038 NCBI(pubmed)
24155962 NCBI(pubmed)
22195028 NCBI(pubmed)
20864544 NCBI(pubmed)
Status: Known Variant
Name: NM_001253256 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phosphatidylethanolamine-binding protein FT2a (GMFT2A), mRNA.
PubMed ID: 22195028 NCBI(pubmed)
20864544 NCBI(pubmed)
Status: Known Variant
Name: NM_001289356 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max flowering locus T-like protein 2b (FT2B), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001289356 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein FLOWERING LOCUS T-like (FTL5), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:15273415..15273603 (+ strand)
Length: 189
Type: five_prime_UTR
Position: Chr11:15273604..15273807 (+ strand)
Length: 204
Type: CDS
Position: Chr11:15273941..15274002 (+ strand)
Length: 62
Type: CDS
Position: Chr11:15274104..15274144 (+ strand)
Length: 41
Type: CDS
Position: Chr11:15277253..15277479 (+ strand)
Length: 227
Type: CDS
Position: Chr11:15277480..15277760 (+ strand)
Length: 281
Type: three_prime_UTR

>Vigan.11G108800.01 class=Sequence position=Chr11:15273415..15277760 (+ strand)
CAAAAACTTG CGGGTCCCCA AGAAAATTCA GCTTTTTCTG TCTTGTGTGC TAGGACGAAG ATCTTTTAAT TATTTTGAAA
GGGAAAAGAC GTGGATTGAA AAGGTATTGA GTCGAGTATA AATAGAGAGA ACCTGGTAGG TTGTCTGATA ACAACGCAAG
TTGTATTATT GTTCTGAGGA AACTGATTGA TGATGCCTGG AGGAAGTAGG GACCCTCTGG TTGTAGGGCG TGTGATTGGG
GATGTGTTGG ACCCCTTTCA ATGTTCCATT CCCATGAGGG TCAGCTACAA TAACAAAGAT GTCACCAATG GATGTGAATT
CAAACCTTCA CAAGTTTTCA ACCAACCCAG AATAACTGTC GGTGGAGATG ATCTCAGGAA CTTCTATACC TTGGTAATTC
ATTGCTCCTT CTCTTCTTCT TCTTCTTCTT CTTCTTCAAC TGATTGTCTT TGCCACTGAG TGCAATATAT AATTTCATAT
TTTGGAAGGA TGAACTTTCA CATATTTTAA TTTCTCTCGT TAACAGATCG CAGTTGATCC CGATGCACCC AGTCCGAGTG
ACCCTAATTT GAGAGAATAC CTCCATTGGT GAGCCAGAAT TTGTTCCAAC ACACCATCAA TCTTCTTTTA TATGAACTCA
ATTATACATT ATAACATTTA ACCATCACTC ACTCTCAAGC GTATTTCAGG TTGGTGACTG ATATTCCTGC AACAACGGGA
CCTAGTTTCG GTACGTATGA TATTCCTCCA TTTTATTAAC CTAATGATTA CTCTCTGGGC TGGCTTAAAC ATATTCAAAC
CTTTTTTTTA ACTTAAATTT GATGGTATTT TGTATCTAGG CTTAAATACT GATATCATTT TTATGTTATT GAGTTTATTC
AATTTACTTC TATTTTCTTT TAATTTAGTT CCATTTTATT TTAAAAAAAT TCAGATTAAA TTAAATAAAA ATAAAAATAA
AAAAATTAAA TTGAATATAA AATATTATGA TGGTTTACCA TGTAAACATC TTTATAAAAT TAAAAAACAT AAATAAAAAA
GAAAAAATAT TATATAAAGA AAATGAATTG AGAGGTGGGA AATATTAGTC ACTAAGTATT AATTCTTTAA ACGTGATTAG
TAAAAATCAA AATAAACAAA ATTGAGGAAA ATTGAAACCA AATTGAAAAT AAAAATAAAA ATTCAATTAA ATAAATTCTG
AAAATAAAGA CAAAATTAAT ATTTAAACCT AATACATCTA TATTTTAATA GCATAATTAA TGTTTTCTTT AAGTGTATTT
TTTATTTATG ATTTGTCTAA GTTACTAATA ACACAGGAAC TCAAATTTTC AAACTATTAG TTATTTTTCA TTCATCTCTG
AATTCCTATC TTTCGTCGTT AGGAGTCGTA CGTATCCTTT CCCAAAGTAT GAATATATCG TCCAAAATAG TACACTTAAA
CATTTTCTTA TGTTTTTACT ACAATAAACA TTGTTGCCAA TACTATTTTT ATTTATCTGG TTAATATTTA TACAGTATTA
TATATATATA TATATTTATT TATTGGAGTA TAAATAATTT TAATTGGTTG CATCTTCCTA GTTTACATTT GGCTTTGAAT
TGAATTTGAT CTAAAGGAGT CTTGAATTTA TTTCGATGGC TAACATAATA TGAAACATTA ATATAATTTC GAAACATTGG
ATATGCGAGG TATAAAAGCA TAGAACATCA GATAATATAT ATAGATATTA TTGCACATAG TGAAAGTGAA AAGTGAGTGC
GTTACCCATG GATATAGGAA TACTAAATGT GAGTGTGAAA GCAATGTAAT TAGAAAATCA TGCCTTGACC ACTCCCCTAT
TTATTGGTTT TGATCCTTAA AATTTAATTT TTTTCAAGAT GATTTCTATG ATCACTTTGT GGTATTATGA CATGCATGCA
TATGTTACAT CAATCATATT CTTAAATATT ATGTTATGTG AGATAGGTAG ATAGGCATAT ATATAATATA TTTAAATAAA
TTCAAATTAA GAGGATTAAA AGTGAAAAAA AAATATAGAG ATGATGCATT AAGTCATTTT TACAACGTAC AAGTATTAAA
TAAGAGAATC TCTTGGCTGA TAATGATATT CAAAAATATA CAATAGTAGT TTGAGAATCC AAATTATAAG CTAAATAACA
GTGTAGGAAA AGATTTTTGC ATGTTATTTT GGATATTGTA TTTCGGTTAT AAAATCAAAA TATATTAAGA TTTTTAAAAA
TGAGTAACTT TTTTAAATTT GAGGTAGAAA AGTTCTTATT ATGTTTCGGT TCCATAAAAA ACAAAACATA AAATTATAAA
TAAAAAAAAT ATAAAAAAAT GTGAAATTTG TTTTAATTTT CATAATAATA ACTAGAACCT AAATTCTTTT TGATATAATT
TTTTTTAATT TTAAAGATAT TAGAATTTTG TTAATATTAA AATTGAATAA TACTTTTAAT TAGAGAAGAT ACTAAGATTC
AGTTATAACT ATGACCACAA CCTAATACCT TTTATATTTC GGTTTGGTTT ATAATCAAAG CCTAATATAT ATGCGTTTGT
TTTTTAAATA ATATTTTTGT TTTTATTTTT TTATACATAT TAAATTTGCA GAAAAATAAT GTAGAACTAA TACATAAGTC
ATGGATTAAT CATATGTATA CTTTTCTTCA TTGTGATCTT TTTAAACTGT ATGTATATTG TCAGTATTTT GCATGGTCTT
CAAGTAACTT GAAATGAAAG TGATTATATC ACAAACAAAT TTTAAACCTC TAAACTTAGT AACAATTTTA AAGTTTTGTT
CAATCTTTCA CTCTAGTTCA CCGAAGTAGA ACATACATAT ATCACTTCAA TTCTACAAAA ACAAAAACCT ACAACTTTGT
GTCATAATAA AATAATTAAA AAAGTAGCAA TTTTGAAAAT TTTGCATACT TATAGGCTCA CTCGTATAGG AACCTAAATA
GAACATATAT GACTTTGATT CCTTTGTAAC TTAGACCTAT AAATTTATAA AATTTCCAAA ATTATCACAA CATCTTTATA
TTCCTGGTTT ATTGAAAATC AAAGTATTTC ACGCATTTTT AAAAGTCAAA ATTGGACTGG TGGAAACAAC GAATCATAAA
AGCATGGAAA CCTTGTTTGT TTTCTCTCTT CCATCAGAAT CACAGAGCAT TCGAATTCTT AAAGCGCATA ATCATGTGGG
AAAAGATAGA AGATTTTATT CAAGAAACGA CACGAAAAGC AACAGTATGA CTGAAGGAGA ATATTCATAT TAAATAGATT
ACCTTTTGTT GGCCATCTCT GTAAATCACA TGACAAGATA ACACCAAAAC CTTCATAGTT ACAAGGTCTA TAGATCAGAA
CAGAACATCA TAGAAAAAGC TGCATAACCT GTTGATGCAA CGGGTTTAAC AAAATTTGAC AAGGTGAAGG AAGTGGTAGA
ATAAGAATCA TAAAAGTTTA AATTCAACTC CAAAAATCTT GATCAAACCT GAGTTCGAGT CCATTAGGGT TACTGTGAGA
GACTAAACTT TCATCTCATC AGTTAGAAAA CGACACGTAA TTCTCTTCTG ACATCATTTA TAATTGTTTT TAAGATTTTC
TAGTATTTTC TAATTGGAAG ATATAAAAAG GCACACAACA CTAGTGGCTT TGCTTTTTTA AAAAGTGTAG ACGAATTTTT
ATCCACTTGT AGGTTCTTTG AAGTCTTTTT ATGTGCAGTA CTAGTAGGAC CTTATTTCTT ATTAATATCT GAACTGAAAT
ATACTACTTT ATTGTTGATA ATGACAGTGA CATTTATGTT CGTAACAACG AAATGAGAAA TACAAATTAT TTGAACAGGT
CATGAGGTTG TAACATATGA GAGTCCACGA CCCATGATGG GGATTCATCG TATCGTGTTT GTGTTGTTTC GCCAATTGGG
TAGGGAGACT GTGTATGCAC CAGGATGGCG CCAGAATTTC AACACCAGAG AATTTGCTGA ACTTTACAAC CTTGGATTGC
CCGTTGCGGC TGTCTATTTC AACATTCAGA GGGAATCTGG TTCTGGTGGA AGGAGATTAT ATTAACAAAA CAGAAAACTT
TATAGTATAC AACAAAATAA AGTACTAATT AAACTTCCTT GAGGGTTTCG GAAATATTCG CAATGATCAC CTGCTAAATG
AGTGCCTCTT TAACTTAAAA TCAACATAGA CCAAATAAAT CATTTGCTCG GTTGGATAGC ACCAAGAACT CTATATATGT
ATCCATGAAT GGAACCGAAC TATCCTTCTT GCTTCTTCTT TTTTTTCTTT TCATTTATGT ATTTTCTATT TAAAAAATGT
TATAATATAA AAGTGTGTTA GAAATA

>Vigan.11G108800.01
CAAAAACTTG CGGGTCCCCA AGAAAATTCA GCTTTTTCTG TCTTGTGTGC TAGGACGAAG ATCTTTTAAT TATTTTGAAA
GGGAAAAGAC GTGGATTGAA AAGGTATTGA GTCGAGTATA AATAGAGAGA ACCTGGTAGG TTGTCTGATA ACAACGCAAG
TTGTATTATT GTTCTGAGGA AACTGATTGA TGATGCCTGG AGGAAGTAGG GACCCTCTGG TTGTAGGGCG TGTGATTGGG
GATGTGTTGG ACCCCTTTCA ATGTTCCATT CCCATGAGGG TCAGCTACAA TAACAAAGAT GTCACCAATG GATGTGAATT
CAAACCTTCA CAAGTTTTCA ACCAACCCAG AATAACTGTC GGTGGAGATG ATCTCAGGAA CTTCTATACC TTGATCGCAG
TTGATCCCGA TGCACCCAGT CCGAGTGACC CTAATTTGAG AGAATACCTC CATTGGTTGG TGACTGATAT TCCTGCAACA
ACGGGACCTA GTTTCGGTCA TGAGGTTGTA ACATATGAGA GTCCACGACC CATGATGGGG ATTCATCGTA TCGTGTTTGT
GTTGTTTCGC CAATTGGGTA GGGAGACTGT GTATGCACCA GGATGGCGCC AGAATTTCAA CACCAGAGAA TTTGCTGAAC
TTTACAACCT TGGATTGCCC GTTGCGGCTG TCTATTTCAA CATTCAGAGG GAATCTGGTT CTGGTGGAAG GAGATTATAT
TAACAAAACA GAAAACTTTA TAGTATACAA CAAAATAAAG TACTAATTAA ACTTCCTTGA GGGTTTCGGA AATATTCGCA
ATGATCACCT GCTAAATGAG TGCCTCTTTA ACTTAAAATC AACATAGACC AAATAAATCA TTTGCTCGGT TGGATAGCAC
CAAGAACTCT ATATATGTAT CCATGAATGG AACCGAACTA TCCTTCTTGC TTCTTCTTTT TTTTCTTTTC ATTTATGTAT
TTTCTATTTA AAAAATGTTA TAATATAAAA GTGTGTTAGA AATA

>Vigan.11G108800.01
ATGATGCCTG GAGGAAGTAG GGACCCTCTG GTTGTAGGGC GTGTGATTGG GGATGTGTTG GACCCCTTTC AATGTTCCAT
TCCCATGAGG GTCAGCTACA ATAACAAAGA TGTCACCAAT GGATGTGAAT TCAAACCTTC ACAAGTTTTC AACCAACCCA
GAATAACTGT CGGTGGAGAT GATCTCAGGA ACTTCTATAC CTTGATCGCA GTTGATCCCG ATGCACCCAG TCCGAGTGAC
CCTAATTTGA GAGAATACCT CCATTGGTTG GTGACTGATA TTCCTGCAAC AACGGGACCT AGTTTCGGTC ATGAGGTTGT
AACATATGAG AGTCCACGAC CCATGATGGG GATTCATCGT ATCGTGTTTG TGTTGTTTCG CCAATTGGGT AGGGAGACTG
TGTATGCACC AGGATGGCGC CAGAATTTCA ACACCAGAGA ATTTGCTGAA CTTTACAACC TTGGATTGCC CGTTGCGGCT
GTCTATTTCA ACATTCAGAG GGAATCTGGT TCTGGTGGAA GGAGATTATA TTAA

>Vigan.11G108800.01
MMPGGSRDPL VVGRVIGDVL DPFQCSIPMR VSYNNKDVTN GCEFKPSQVF NQPRITVGGD DLRNFYTLIA VDPDAPSPSD
PNLREYLHWL VTDIPATTGP SFGHEVVTYE SPRPMMGIHR IVFVLFRQLG RETVYAPGWR QNFNTREFAE LYNLGLPVAA
VYFNIQRESG SGGRRLY*