GBrowse Details

Vigan.11G101900.01

Basic Information:
Name: Vigan.11G101900.01
Multiple alignment
Variant Information
Position: Chr11:13633353..13636005 (+ strand)
Length: 2653
Functional Information:
Description: Hypothetical protein.
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:153.85,44.66,65.45,54.67,70.18,111.8 1,73.14,53.16
Automatic updates:
Name: NM_001250131 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100526997 (LOC100526997), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001250131 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100526997 (LOC100526997), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:13633353..13633425 (+ strand)
Length: 73
Type: five_prime_UTR
Position: Chr11:13633426..13633471 (+ strand)
Length: 46
Type: CDS
Position: Chr11:13633608..13633863 (+ strand)
Length: 256
Type: CDS
Position: Chr11:13635202..13635250 (+ strand)
Length: 49
Type: CDS
Position: Chr11:13635251..13636005 (+ strand)
Length: 755
Type: three_prime_UTR

>Vigan.11G101900.01 class=Sequence position=Chr11:13633353..13636005 (+ strand)
CAACTATTTC ATGTCTTCTT CTCTTTCTCA GAGACACAAC ATAACACCAC AGTGAGAAAA CAAAACAAGT GCAATGAGCA
ATTTCCAGAG AATATCGCAC GAATCCTACC CTCCACCAGG TACATACTTC ACACACCAAT CTTATACCCT ATTTCTGATT
CTCTTATTCC ATTTTTATTT TTGATTATTA CAATTTTTCA TCCTAATATT CAGATTCGCG AATTAATTAA TTCATTAAAT
TAATTTTTTG GACAGGATAC GGATCTCCTT ACCCTCCACC GCAACCGGGT TACCCATCGG CGCCGCCGCA AGAAGGCTAC
CCTCCGCCGC CTCCGCCGGG ATACGGGGGT TATCCTCCGC CGCCGCATCC GCCATATGAC TCGTACCAGG GGTATTTCGA
TAACGGGCGT CCTCCGCCAC CTCCTCCGCC CCACTACCAC TACCAGCACC AGCATGTGGC GCATCATCAC CATCACGAGG
AGCGTGAATG CTTTCCGTTC CTCCGAGGAT GGTATGTTTT TTCATAGCTT TTTAAGGGTA AAATGTGCTT TAGGTCGCTC
AATTTTTTTG TGTAAATTAG TTTTGGTGTC TATCTTATAA AGATCATGAC TCTGGTGCAC CTATTCTTTA CATATTTTAT
GGAATTTGGG GTATCAGGCT GTGGGAAGAA ATTCCCTAAT TATTAAAAAT ATGAGAACCA AAATTATCTT TAAGCATAAA
GGCTAAGACA AATTTTAACC TAAATTTGAG GATCTAGAAA TTTTTTTACC TAATTTCTTT TTCCTTCGTT TATTTTATTG
CATGGCTAAT TGTTTAGAGT ATGATAATCT ACCCTCGTGG TCTGCTAGTT ATCTGTGGGG ACATGTTTGA ATAAGCTTTT
GTAAGGACTG TAGAGAGGAA AAAAAAAAAC AATAGCAAAA AGTGAAATAA GTTATTTTAA GATTAAATTA TTTCATACAT
AACATAATTT GGAGAAGTTC TCTCTTAGTT CTTCTAAAAC ATGATTTTTA ACTTTGGAGA AATTTATTTA TTCTTCTTTT
CATACAAGTG TGTACAAAAG AGTTTATCTG AACAGTTCTT AGTTCTACTC CTGTTAGAAT GGAAGTTGTA TTTTAACTTG
TCGGAATTTT ATAGTTAATT AGTTTGAGGG TTTTAACCTT ATAAGTTTTG TCGAATTAGA ATGTGACTGT TGACAAAATG
AACAGTGATT AAACATATAA GATTAGAAGA TGGGGAAGTA TTAAATTTTT AATTATTTAA TTATTTATAT GCAAGTGAGA
AGTGTTCAGT TGAGAGTTGG AGGCTTAGGT TTGATTTTTG TGGTTTGTGT TGGCTTTGGC TTATACAACA CAAACTATTA
TTTTGTTTTG GTTTATTTAA ATCCTCCACA CTGATTGGAT AGTGTACATC TTAGTATGTA TGGAACCGAA AGGATCAACC
GTATGTTGGA AAGAAAAATA AAATTTGTAG GTAGATCTTA CTTTTCTCAA ATATCAAAAT CATGGTTATT GAGTCAGACC
TAATACATAA TTATATGTGC TAATTACTAA CTAACTTGTT ACATTTTCAC TGATGAGCCT AAGGCATTAT TGGTTGATTA
ATTTAGTTAT ACTTATTATT TCTAAATTGA GGTTTCTCCT GATATAAATT GTCTTTTCAG ATTACATAGT ATACAGAAGG
AAATGTTTCA TGCCCTGAAT CTTTTGTGTG CGTCTTCAAT TAGCTTTACT GACGCATCGT TAATGAATTC CTATAGAATT
GCATGAAATC TTAGTTTCTG TTTCTAACTC ATCTTCTGTT AGTTTATGTG GTGGTAACAA GAGTAAGAAT CCTTCATTTA
TATGTGCAGC TTGGCAGCGC TTTGCTGCTG TTGTGTGCTA GAGGAGTGTT GCTTCTGATA ATGACATTAC AAATGCTGTT
TCTTCAGTTT GGTGCACTTG GTTATAGCTC TCTAGACATG TATGTGGCTC AAATTCTACA TAATAAGAGT GCGAGGTGGA
AAGACTTGGT CATTCTCGTA ACACTTTGGT CTTTCCCCTC AACCAAATTT CTGGTCTGTG CATAGGTTCT GTGGTGTGGT
CTATGTGAAT TGATTTGTAC GAACACTATA TTGGAAATCG TGAAACGTCT CTTATAACAG ACAATGAAAT GGTTAAAATT
GTGACAAATT ACTCGGCTTC TTTACTCTTG AATATCATTT GCCTTTTTAC TTAGTATGAG AATTTCTTTT TCTGTTTTTT
TGTCCAGTGA CTAGCTTTTT TAAACATAAT TTCCAGAAGA CGTTTTGAAG TTGAGGCAGC GAAAACGACC TGACCTGTGT
AATTTTGATT ATTACAAAAG GTACAAGATT CTCACGTAGT CTACTTTATT AACAGACTTA TTTGAAAGTG GGTGGCAAGG
ATTATCTAAA GATGTGGATC TCAATTGCAT TTTTTTTGCA CGTTTGAGCT CAATTTCCGG TAAAATTCTC CTACAGGTGT
GATAAGGAGG TGCAATTCTT TTTATCATTT TTATATTTTT TATTTATTTT AATCTTTGAT TAATATAAAT TCTTAAAATC
TTATCATATT TATTTGGTTT TTGCCTGAGA ATTTTAACGT TGGGTGTGTA CGTCGATGAA AAGACCAAAA AAATACACAA
ATGTCACATT TAT

>Vigan.11G101900.01
CAACTATTTC ATGTCTTCTT CTCTTTCTCA GAGACACAAC ATAACACCAC AGTGAGAAAA CAAAACAAGT GCAATGAGCA
ATTTCCAGAG AATATCGCAC GAATCCTACC CTCCACCAGG ATACGGATCT CCTTACCCTC CACCGCAACC GGGTTACCCA
TCGGCGCCGC CGCAAGAAGG CTACCCTCCG CCGCCTCCGC CGGGATACGG GGGTTATCCT CCGCCGCCGC ATCCGCCATA
TGACTCGTAC CAGGGGTATT TCGATAACGG GCGTCCTCCG CCACCTCCTC CGCCCCACTA CCACTACCAG CACCAGCATG
TGGCGCATCA TCACCATCAC GAGGAGCGTG AATGCTTTCC GTTCCTCCGA GGATGCTTGG CAGCGCTTTG CTGCTGTTGT
GTGCTAGAGG AGTGTTGCTT CTGATAATGA CATTACAAAT GCTGTTTCTT CAGTTTGGTG CACTTGGTTA TAGCTCTCTA
GACATGTATG TGGCTCAAAT TCTACATAAT AAGAGTGCGA GGTGGAAAGA CTTGGTCATT CTCGTAACAC TTTGGTCTTT
CCCCTCAACC AAATTTCTGG TCTGTGCATA GGTTCTGTGG TGTGGTCTAT GTGAATTGAT TTGTACGAAC ACTATATTGG
AAATCGTGAA ACGTCTCTTA TAACAGACAA TGAAATGGTT AAAATTGTGA CAAATTACTC GGCTTCTTTA CTCTTGAATA
TCATTTGCCT TTTTACTTAG TATGAGAATT TCTTTTTCTG TTTTTTTGTC CAGTGACTAG CTTTTTTAAA CATAATTTCC
AGAAGACGTT TTGAAGTTGA GGCAGCGAAA ACGACCTGAC CTGTGTAATT TTGATTATTA CAAAAGGTAC AAGATTCTCA
CGTAGTCTAC TTTATTAACA GACTTATTTG AAAGTGGGTG GCAAGGATTA TCTAAAGATG TGGATCTCAA TTGCATTTTT
TTTGCACGTT TGAGCTCAAT TTCCGGTAAA ATTCTCCTAC AGGTGTGATA AGGAGGTGCA ATTCTTTTTA TCATTTTTAT
ATTTTTTATT TATTTTAATC TTTGATTAAT ATAAATTCTT AAAATCTTAT CATATTTATT TGGTTTTTGC CTGAGAATTT
TAACGTTGGG TGTGTACGTC GATGAAAAGA CCAAAAAAAT ACACAAATGT CACATTTAT

>Vigan.11G101900.01
ATGAGCAATT TCCAGAGAAT ATCGCACGAA TCCTACCCTC CACCAGGATA CGGATCTCCT TACCCTCCAC CGCAACCGGG
TTACCCATCG GCGCCGCCGC AAGAAGGCTA CCCTCCGCCG CCTCCGCCGG GATACGGGGG TTATCCTCCG CCGCCGCATC
CGCCATATGA CTCGTACCAG GGGTATTTCG ATAACGGGCG TCCTCCGCCA CCTCCTCCGC CCCACTACCA CTACCAGCAC
CAGCATGTGG CGCATCATCA CCATCACGAG GAGCGTGAAT GCTTTCCGTT CCTCCGAGGA TGCTTGGCAG CGCTTTGCTG
CTGTTGTGTG CTAGAGGAGT GTTGCTTCTG A

>Vigan.11G101900.01
MSNFQRISHE SYPPPGYGSP YPPPQPGYPS APPQEGYPPP PPPGYGGYPP PPHPPYDSYQ GYFDNGRPPP PPPPHYHYQH
QHVAHHHHHE ERECFPFLRG CLAALCCCCV LEECCF*