GBrowse Details

Vigan.11G003400.01

Basic Information:
Name: Vigan.11G003400.01
Multiple alignment
Variant Information
Position: Chr11:427912..431697 (- strand)
Length: 3786
Functional Information:
Description: Similar to Pyruvate kinase. [V7C1T5, Phaseolus vulgaris]
GO: Biological Process: glycolysis (GO:0006096)
Molecular Function: magnesium ion binding (GO:0000287)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: pyruvate kinase activity (GO:0004743)
Molecular Function: potassium ion binding (GO:0030955)
InterPro: Pyruvate kinase (IPR001697)
Pyruvate kinase-like, insert domain (IPR011037)
Pyruvate kinase, barrel (IPR015793)
Pyruvate kinase, alpha/beta (IPR015794)
Pyruvate kinase, C-terminal (IPR015795)
Pyruvate kinase, beta-barrel insert domain (IPR015806)
Pyruvate/Phosphoenolpyruvate kinase-like domain (IPR015813)
Pyruvate kinase, active site (IPR018209)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:42.15,73.45,53.20,21.67,163.88,133.4 0,209.42,35.16
Arabidopsis thaliana homolog: AT3G04050.1, AT3G25960.1, AT3G55650.1, AT3G55810.1, AT4G26390.1, AT5G08570.1, AT5G56350.1, AT5G63680.1
Structure :
Position: Chr11:427912..428345 (- strand)
Length: 434
Type: three_prime_UTR
Position: Chr11:428346..429158 (- strand)
Length: 813
Type: CDS
Position: Chr11:429480..429941 (- strand)
Length: 462
Type: CDS
Position: Chr11:430942..431199 (- strand)
Length: 258
Type: CDS
Position: Chr11:431200..431697 (- strand)
Length: 498
Type: five_prime_UTR

>Vigan.11G003400.01 class=Sequence position=Chr11:427912..431697 (- strand)
TGTGATTAAA AAAAAGGTTA CAAGCACTTT AATAAATAAC CGCGGTATCT ACTGCTGTAC CTTCATCATA ACTATTAATA
AATACAAACT TAATTTTGGA AAATAAAAAC GCAGAATTCA GTTGTGGAAA GGCGCAAAAG TGCTTCTGTT TCTGTGATTC
TGTGGGAGTT GGGGAAAGTG GTGGACTCGT GGCGACTTTT AAATTCAACA AACATAAAAA TCCCGTAAGG CGTGTTGGGT
GCTGTTTGGA AGACAAAAAA ACATAGGTTT CTATTGTGCA AAAATAAATA AATAAATAGA TACTACAGAG CGTGAGATTA
AGACCCTCTC AACCTAACCC TTCCGACTCA GACCGAGGCT GGTGTTGTCC CAATCTAAGG TTTGTTTGTG CTTCCGCTGT
CGTGTCTGAT TTTTGGTTTT GTTTATTTCA GTTTCATGTG ACATATCCAT TGATCTGCAT GTGCAGAGAA AGGAGTAGCA
GTGAAGGAGT GAGTTAGAAT GGCGAACATA GACATCGAAG GGATCTTGAA GGAGCTACCC AATGACGGGC GTGTTCCAAA
GACCAAAATA GTGTGTACGT TGGGTCCTGC TTCCCGATCC GTAGAGATGA CCGAGAAGCT TCTGAGGGCA GGGATGAACG
TTGCTCGTTT CAACTTCTCT CATGGCAGCC ACGAATATCA TCAGGAAACC CTCAACAATC TCAAAATTGC TATGCACAAC
ACTGGAATAC TCTGTGCTGT CATGCTCGAC ACTAAGGTCA TTTCGCCGTT ACTTTTCATC GGTTCAATTT TTCTGTTATA
CTACTGTGTG CCCTCTTTGA ATTCTTCATT TCCTTTTTTC GTTGCCGATC ATACTTCCTT TCTTCATTCA CTATTGAAGA
AGTGCATTTA TTATGCATTT GGGGACACTT CTAAGCTCAA CCTTTTTATA GCTTTTATGG AAATTTGGTG GGGGCATTTC
TAGAAAGAAA TGCGATTCTA AACAATTAAA ATGATATTTT TGGTGTTTCA AATCAATTTT TTAGCTTTAA ATTGCTTTAA
AATTGTGGTT GATATGAATG TTTTCCAGCA CGTGAGATTC AAGGAGAAAG ATTATATCTT ATGCTCTAGG TAGGGAATTG
TGTAATGTGT ACTATTTTTC TCTACAAATA TGCCTTTTAG ATAAAGAGTT TTCAAGCTCA GATTGCTTCA CTTCCAATTC
AGATTCATCC AAAATGCTCA AAATTGAAAT CATTCAAAGC CTAGTTTGTT AATGCTCACC CTGACACTAC TTAACGTATA
AAATTAGTTA TGCATAAAGT TTAACACTTC TCACTATTCA TGCAGACATG ATTCTCCCAT GTCTAGATTC ATTGCCTGCT
CTAATTTCTT TTAAGTGATC AATGATTTTG GTGATGGAAT GGTGGTAAGT GTTAAGTTTG TTGTTTCCAT TTATAGTGTC
ATATATAGCT ATTAGCTTGT GAACACAATT TCAAAGTGCC TTTGGCCTTC TTGAATGAAT TTTCTGACAA GTGTATTGTA
TCCGGTTGCT ATTAAATGCT TAAATTTTTC GCACTTCTCA TGACCAGTTT ATGCTCTAGT TTTACATTTT AATGCAGTTG
TTGTACAGCT TTGTGTTTTT CCCCTGTAAA TATCTTGTTG AGGAGAATAT CTTGTTCTTG TCATTGTAAA GTTCTGTTTC
TCTTATGATG ATGGATTTCT TATTCAATAA ATCATTAACA TTCCGTGTAC ATCTGCTATA TGCTGTATTT CTGCAGGGAC
CTGAGATTCG GACTGGTTTT CTGAAAGATG GAAAACCTAT TCAACTTAAA GAAGGACAAG AAATCACCAT AACTACTGAT
TATGATATTA AGGGGGACCC GGAGATGATA TCGATGAGTT ACAAGAAACT GCCTGTCCAC TTGAAGCCTG GAAATACCAT
ACTGTGCTCT GATGGGACAA TCACTCTCAA TGTCCTGTCC TGTGATCCTG ATGCTGGTAC TGTTAGATGT CGTTGTGAAA
ACACTGCCAC CTTAGGTGAG AGAAAAAATG TTAATCTTCC TGGTGTTGTG GTGGATCTTC CCACACTTAC TGAGAAGGAT
AAGGAAGATA TTCTTCAATG GGGTGTAACC AACAAGATTG ACATGATTGC TCTTTCGTTT GTTCGGAAAG GCTCAGATCT
TGTTAATGTC CGAAAGGTTC TGGGTCCACA TGCAAAGAAT ATTCAGTTAA TGTCAAAGGT ATTTTTTATT GCATTCTTAT
GCAATTTCCG TAATAAAAAA CCTTGTGCAT CTTTCAAAAT AAACTAGAGT GTTTTTTTAT TAGTTGTGAT CTATTTTTCC
TTTGTGGTTT CTCAGTTGAT GTGGAAATAG CTGCGTTTTT TCCTCATCAT CACGATTTGC ACATCTACTT CAGGAATAGT
GTTTGTTGTG TATTGTAAAA GTGTAATTTA TATTGGTCAA GTGTAATTTT TACATATGCT GAAGGTTTTC TTTTGCTAGT
TCGTCTCTTT CAATTCACAA AACCTGATTT ATATTTTAAT GATTTTATGA TATTCCAAGG TTGAGAATCA GGAGGGAGTC
CTGAATTTTG ATGAAATCCT TCGGGAGACT GATGCATTCA TGGTGGCCCG TGGTGATCTT GGAATGGAGA TCCCGGTTGA
AAAGATTTTT CTGGCACAGA AAATGATGAT ATACAAGTGT AATCTTGTTG GGAAGCCTGT GGTCACTGCC ACCCAAATGC
TTGAATCAAT GATCAAGTCC CCCAGGCCAA CCCGAGCTGA AGCAACTGAT GTAGCTAATG CAGTTCTTGA TGGAACAGAT
TGTGTCATGC TTAGTGGTGA AAGTGCCGCC GGGGCTTACC CTGAACTTGC TGTGAAGATC ATGTCTCGTA TTTGTATTGA
AGCAGAATCA TCCCTTGACT ATGGTGCTAT CTTCAAAGAG ATGATAAAGT CTACCCCCTT GCCTATGAGT CCACTGGAAA
GCCTTGCATC ATCTGCTGTC CGCACAGCTA ACAAGGCCAA AGCAAAACTC ATTGTTGTGC TGACACGTGG TGGGTCTACA
GCCAAATTAG TTGCTAAGTA TAGGCCAGCG GTTCCGATAT TGTCTGTGGT GGTTCCAGTT TTGACCACAG ACTCATTTGA
TTGGACCTGC AGTGATGAGA CGCCAGCAAG GCACAGCTTA ATATACAGGG GCTTGATTCC TATATTGGGC GAGGGATCTG
CTAAAGCTAC TGATGCAGAA TCCACAGAGG TGATTCTAGA AGCTGCTCTT AAGTCTGCAA CAGAAAGGGG GCTTTGTAAG
CCCGGTGATG CTGTTGTTGC GCTGCATCGT ATCGGAGCTG CCTCTGTTAT AAAGATCTGC ATTGTGAAAT AAGTAACGCA
AGATATGCCG ATGAGTTGAA TGTGTTATTC GCCTGCGTGG CACAAACTGA TGCAGAGCTA TGTTTTGGCT TTTGTTTGTG
AAACTTTTGT GCTGTTTATC CATTATATCA TAAAATGGAA GATTTAGTTA CTAGCTTTAG ATGAAGTGAG TTTTGTTATT
CGCTGTTAAT ACTGCGGAGT ACTCTGAAAG AGAGATCATG AAAATAAATC AGTATTCGTG TTTTTAACTA CGATTGGTTT
TGCTGTGATA GATACATCGT TTCATTATCC TCAAAAAAAC TGTTGGCTTG GGAATGGCAA GTGTTTATTT GAAGTAGGGA
TGACAAAATG GTTCTGATAA CGAAGCTGTA CATGTTAGGA ATGAACAAGG CAATGCCATT ATAACATTGC TACAAAAAAC
GAATTAGTGG GTCTTGTATA AAAAAC

>Vigan.11G003400.01
TGTGATTAAA AAAAAGGTTA CAAGCACTTT AATAAATAAC CGCGGTATCT ACTGCTGTAC CTTCATCATA ACTATTAATA
AATACAAACT TAATTTTGGA AAATAAAAAC GCAGAATTCA GTTGTGGAAA GGCGCAAAAG TGCTTCTGTT TCTGTGATTC
TGTGGGAGTT GGGGAAAGTG GTGGACTCGT GGCGACTTTT AAATTCAACA AACATAAAAA TCCCGTAAGG CGTGTTGGGT
GCTGTTTGGA AGACAAAAAA ACATAGGTTT CTATTGTGCA AAAATAAATA AATAAATAGA TACTACAGAG CGTGAGATTA
AGACCCTCTC AACCTAACCC TTCCGACTCA GACCGAGGCT GGTGTTGTCC CAATCTAAGG TTTGTTTGTG CTTCCGCTGT
CGTGTCTGAT TTTTGGTTTT GTTTATTTCA GTTTCATGTG ACATATCCAT TGATCTGCAT GTGCAGAGAA AGGAGTAGCA
GTGAAGGAGT GAGTTAGAAT GGCGAACATA GACATCGAAG GGATCTTGAA GGAGCTACCC AATGACGGGC GTGTTCCAAA
GACCAAAATA GTGTGTACGT TGGGTCCTGC TTCCCGATCC GTAGAGATGA CCGAGAAGCT TCTGAGGGCA GGGATGAACG
TTGCTCGTTT CAACTTCTCT CATGGCAGCC ACGAATATCA TCAGGAAACC CTCAACAATC TCAAAATTGC TATGCACAAC
ACTGGAATAC TCTGTGCTGT CATGCTCGAC ACTAAGGGAC CTGAGATTCG GACTGGTTTT CTGAAAGATG GAAAACCTAT
TCAACTTAAA GAAGGACAAG AAATCACCAT AACTACTGAT TATGATATTA AGGGGGACCC GGAGATGATA TCGATGAGTT
ACAAGAAACT GCCTGTCCAC TTGAAGCCTG GAAATACCAT ACTGTGCTCT GATGGGACAA TCACTCTCAA TGTCCTGTCC
TGTGATCCTG ATGCTGGTAC TGTTAGATGT CGTTGTGAAA ACACTGCCAC CTTAGGTGAG AGAAAAAATG TTAATCTTCC
TGGTGTTGTG GTGGATCTTC CCACACTTAC TGAGAAGGAT AAGGAAGATA TTCTTCAATG GGGTGTAACC AACAAGATTG
ACATGATTGC TCTTTCGTTT GTTCGGAAAG GCTCAGATCT TGTTAATGTC CGAAAGGTTC TGGGTCCACA TGCAAAGAAT
ATTCAGTTAA TGTCAAAGGT TGAGAATCAG GAGGGAGTCC TGAATTTTGA TGAAATCCTT CGGGAGACTG ATGCATTCAT
GGTGGCCCGT GGTGATCTTG GAATGGAGAT CCCGGTTGAA AAGATTTTTC TGGCACAGAA AATGATGATA TACAAGTGTA
ATCTTGTTGG GAAGCCTGTG GTCACTGCCA CCCAAATGCT TGAATCAATG ATCAAGTCCC CCAGGCCAAC CCGAGCTGAA
GCAACTGATG TAGCTAATGC AGTTCTTGAT GGAACAGATT GTGTCATGCT TAGTGGTGAA AGTGCCGCCG GGGCTTACCC
TGAACTTGCT GTGAAGATCA TGTCTCGTAT TTGTATTGAA GCAGAATCAT CCCTTGACTA TGGTGCTATC TTCAAAGAGA
TGATAAAGTC TACCCCCTTG CCTATGAGTC CACTGGAAAG CCTTGCATCA TCTGCTGTCC GCACAGCTAA CAAGGCCAAA
GCAAAACTCA TTGTTGTGCT GACACGTGGT GGGTCTACAG CCAAATTAGT TGCTAAGTAT AGGCCAGCGG TTCCGATATT
GTCTGTGGTG GTTCCAGTTT TGACCACAGA CTCATTTGAT TGGACCTGCA GTGATGAGAC GCCAGCAAGG CACAGCTTAA
TATACAGGGG CTTGATTCCT ATATTGGGCG AGGGATCTGC TAAAGCTACT GATGCAGAAT CCACAGAGGT GATTCTAGAA
GCTGCTCTTA AGTCTGCAAC AGAAAGGGGG CTTTGTAAGC CCGGTGATGC TGTTGTTGCG CTGCATCGTA TCGGAGCTGC
CTCTGTTATA AAGATCTGCA TTGTGAAATA AGTAACGCAA GATATGCCGA TGAGTTGAAT GTGTTATTCG CCTGCGTGGC
ACAAACTGAT GCAGAGCTAT GTTTTGGCTT TTGTTTGTGA AACTTTTGTG CTGTTTATCC ATTATATCAT AAAATGGAAG
ATTTAGTTAC TAGCTTTAGA TGAAGTGAGT TTTGTTATTC GCTGTTAATA CTGCGGAGTA CTCTGAAAGA GAGATCATGA
AAATAAATCA GTATTCGTGT TTTTAACTAC GATTGGTTTT GCTGTGATAG ATACATCGTT TCATTATCCT CAAAAAAACT
GTTGGCTTGG GAATGGCAAG TGTTTATTTG AAGTAGGGAT GACAAAATGG TTCTGATAAC GAAGCTGTAC ATGTTAGGAA
TGAACAAGGC AATGCCATTA TAACATTGCT ACAAAAAACG AATTAGTGGG TCTTGTATAA AAAAC

>Vigan.11G003400.01
ATGGCGAACA TAGACATCGA AGGGATCTTG AAGGAGCTAC CCAATGACGG GCGTGTTCCA AAGACCAAAA TAGTGTGTAC
GTTGGGTCCT GCTTCCCGAT CCGTAGAGAT GACCGAGAAG CTTCTGAGGG CAGGGATGAA CGTTGCTCGT TTCAACTTCT
CTCATGGCAG CCACGAATAT CATCAGGAAA CCCTCAACAA TCTCAAAATT GCTATGCACA ACACTGGAAT ACTCTGTGCT
GTCATGCTCG ACACTAAGGG ACCTGAGATT CGGACTGGTT TTCTGAAAGA TGGAAAACCT ATTCAACTTA AAGAAGGACA
AGAAATCACC ATAACTACTG ATTATGATAT TAAGGGGGAC CCGGAGATGA TATCGATGAG TTACAAGAAA CTGCCTGTCC
ACTTGAAGCC TGGAAATACC ATACTGTGCT CTGATGGGAC AATCACTCTC AATGTCCTGT CCTGTGATCC TGATGCTGGT
ACTGTTAGAT GTCGTTGTGA AAACACTGCC ACCTTAGGTG AGAGAAAAAA TGTTAATCTT CCTGGTGTTG TGGTGGATCT
TCCCACACTT ACTGAGAAGG ATAAGGAAGA TATTCTTCAA TGGGGTGTAA CCAACAAGAT TGACATGATT GCTCTTTCGT
TTGTTCGGAA AGGCTCAGAT CTTGTTAATG TCCGAAAGGT TCTGGGTCCA CATGCAAAGA ATATTCAGTT AATGTCAAAG
GTTGAGAATC AGGAGGGAGT CCTGAATTTT GATGAAATCC TTCGGGAGAC TGATGCATTC ATGGTGGCCC GTGGTGATCT
TGGAATGGAG ATCCCGGTTG AAAAGATTTT TCTGGCACAG AAAATGATGA TATACAAGTG TAATCTTGTT GGGAAGCCTG
TGGTCACTGC CACCCAAATG CTTGAATCAA TGATCAAGTC CCCCAGGCCA ACCCGAGCTG AAGCAACTGA TGTAGCTAAT
GCAGTTCTTG ATGGAACAGA TTGTGTCATG CTTAGTGGTG AAAGTGCCGC CGGGGCTTAC CCTGAACTTG CTGTGAAGAT
CATGTCTCGT ATTTGTATTG AAGCAGAATC ATCCCTTGAC TATGGTGCTA TCTTCAAAGA GATGATAAAG TCTACCCCCT
TGCCTATGAG TCCACTGGAA AGCCTTGCAT CATCTGCTGT CCGCACAGCT AACAAGGCCA AAGCAAAACT CATTGTTGTG
CTGACACGTG GTGGGTCTAC AGCCAAATTA GTTGCTAAGT ATAGGCCAGC GGTTCCGATA TTGTCTGTGG TGGTTCCAGT
TTTGACCACA GACTCATTTG ATTGGACCTG CAGTGATGAG ACGCCAGCAA GGCACAGCTT AATATACAGG GGCTTGATTC
CTATATTGGG CGAGGGATCT GCTAAAGCTA CTGATGCAGA ATCCACAGAG GTGATTCTAG AAGCTGCTCT TAAGTCTGCA
ACAGAAAGGG GGCTTTGTAA GCCCGGTGAT GCTGTTGTTG CGCTGCATCG TATCGGAGCT GCCTCTGTTA TAAAGATCTG
CATTGTGAAA TAA

>Vigan.11G003400.01
MANIDIEGIL KELPNDGRVP KTKIVCTLGP ASRSVEMTEK LLRAGMNVAR FNFSHGSHEY HQETLNNLKI AMHNTGILCA
VMLDTKGPEI RTGFLKDGKP IQLKEGQEIT ITTDYDIKGD PEMISMSYKK LPVHLKPGNT ILCSDGTITL NVLSCDPDAG
TVRCRCENTA TLGERKNVNL PGVVVDLPTL TEKDKEDILQ WGVTNKIDMI ALSFVRKGSD LVNVRKVLGP HAKNIQLMSK
VENQEGVLNF DEILRETDAF MVARGDLGME IPVEKIFLAQ KMMIYKCNLV GKPVVTATQM LESMIKSPRP TRAEATDVAN
AVLDGTDCVM LSGESAAGAY PELAVKIMSR ICIEAESSLD YGAIFKEMIK STPLPMSPLE SLASSAVRTA NKAKAKLIVV
LTRGGSTAKL VAKYRPAVPI LSVVVPVLTT DSFDWTCSDE TPARHSLIYR GLIPILGEGS AKATDAESTE VILEAALKSA
TERGLCKPGD AVVALHRIGA ASVIKICIVK *