GBrowse Details

Vigan.10G185900.01

Basic Information:
Name: Vigan.10G185900.01
Multiple alignment
Variant Information
Position: Chr10:24011399..24013258 (+ strand)
Length: 1860
Functional Information:
Description: Similar to Uncharacterized protein. [I1J9D2, Glycine max]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: peroxidase activity (GO:0004601)
Molecular Function: heme binding (GO:0020037)
InterPro: Plant peroxidase (IPR000823)
Haem peroxidase, plant/fungal/bacterial (IPR002016)
Haem peroxidase (IPR010255)
Peroxidases heam-ligand binding site (IPR019793)
Peroxidase, active site (IPR019794)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.11,0.14,35.82,4.42,121.16,42.23,24.60,35.94
Automatic updates:
Name: NM_001254701 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peroxidase 51-like (LOC100804350), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:24011399..24011609 (+ strand)
Length: 211
Type: five_prime_UTR
Position: Chr10:24011610..24011825 (+ strand)
Length: 216
Type: CDS
Position: Chr10:24011912..24012112 (+ strand)
Length: 201
Type: CDS
Position: Chr10:24012218..24012383 (+ strand)
Length: 166
Type: CDS
Position: Chr10:24012603..24013006 (+ strand)
Length: 404
Type: CDS
Position: Chr10:24013007..24013258 (+ strand)
Length: 252
Type: three_prime_UTR

>Vigan.10G185900.01 class=Sequence position=Chr10:24011399..24013258 (+ strand)
TCAAATTTCA CTTTCTTGCT GTAAAAATAG TTTCAAAGAT TCTAACACAA CTGGCTCGTG AACCCGACTA TTTCATGGCT
CGTAAAGTTA GTGATGTACT AATATATTCC CCTCACTCCC CTTCCACTTT TGCACTCAAC TCAAGCCATC ATTCACAATC
GATCTCCCTC TCTGCATTTT CTATTTCTCC TTTATCTGCA AATAGCAGCA AATGGCTCGG CTTAACCTCA TCCTTGTCTG
GTTATTTTTC TCCACTCTCT GTCTTTATTA TTGTCCTTCC TCTGCTCAGC TTAGTCGACA CCACTACGCA AAAACATGCC
CCAATGTCGA AAACATCGTC AGAGAAGCAG TTAAAAAGAA ATTTCATCAA ACATTCGTCA CGGTCCCTGC TACCCTCCGT
CTCTTCTTCC ACGATTGCTT CGTGCAGGTA ATCAATCGCA TGCATTTCAT TCTTTCATTC ACCGTGTAAA TAATAATAAT
ACTATTAGTG TTGTGTCTGC AATATTACTG CAGGGTTGTG ATGCTTCGGT TTTGGTTGCG TCCACGGGAA ACAACAAAGC
AGAGAAGGAT CACCCTGATA ATCTTTCACT TGCCGGAGAT GGGTTTGACA CGGTGATTAA GGCAAAAGCA GCAGTGGATG
CAGTTCCGCT GTGTAGGAAC AAAGTTTCGT GTGCTGATAT TTTAGCCATG GCAACACGAG ATGTTATTGC ACTGGTTTGT
TCATTGATTA CCTTTTGTGA CTATGATTAC CGTGAGAAAC ATGTTGATCC AATGAGTAAT TATAAGGTTT ATTGAATTAT
AATGCAAATG GTTGTTCAGG CTGGTGGGCC TTTCTACGAA GTTGAATTGG GAAGATTTGA CGGGCTAAGA TCTAAAGCTT
CAGACGTAAA CGGGAGGCTG CCTCAGCCAG AGTTCACCTT GAACCAGCTC AATTCACTGT TTGCGGCGAA CGGTCTCACC
CAGACAGAAA TGGTAGCCCT TTCAGGTAAC GCGCGTGCTC CCAAAAAGAC TCTTCAAATT ATTGAACTCT ATACACGTGT
CTTCACTCTT CAATCCCATT GTTGAGATCC AAAGCAATGG GAAAATTTTA CGGATTTAAA TTTCGTGTCT TGCAAATAAG
AGAAGAGTGA AGACTATCAT AGTTAAGAAG AGGCTGCGTC ATCAAAGTTA GGATTTTTTT GATAATTCAT GTGGGTCTAC
ACAGGTGCGC ACACTGTGGG ATTCTCCCAT TGCAACAAGT TCTCAAAGAG AGTGTATAAT TTCAAGAGCA AAAGTGGAGT
GGACCCTGCA CTGAACGAGA AATACGCATC ACAGCTAAAG TCAATGTGCC CAAGGAATGT GGATCCAAGG ATTGCCATCG
ATATGGACCC AACCACACCA CGAGCATTCG ACAATGTTTA CTACAGAAAT CTTCAGCAAG GGAAGGGCCT CTTCACCTCT
GACCAAGTTC TCTTCACGGA TTCAAGGTCC AAGGCCACCG TCAATGCTTT TGCCAGTAGC AGCAAAATCT TCCGTGCCAA
TTTCGCCGCT GCCATGACCA AATTGGGTCG AGTCGGAGTA AAAAATGCAC AGAATGGCAA CATTCGTACA GATTGTTCAG
TCATCTAATT TTCCACAAAC AACACATCCT CAGGGATTCG TTGTGTATAT TAGGTTTCCT TTATGTTTAA AATAACAAGT
ATTGAAAGAA TTTAATTTAT CACCTTCCTC TGTTTTGTTT TTTGTTTTCG TTCTTCCTCT TATATTATCA GATATTTTCC
AGACATATTA ACATATTAGT GTGGATGAAA CATCAGAATA GTGTTTTTTT CGAATTCACA TAGGTTGCAG CTTACCTTAT
CTCGGAATTG CATATTCTTA 

>Vigan.10G185900.01
TCAAATTTCA CTTTCTTGCT GTAAAAATAG TTTCAAAGAT TCTAACACAA CTGGCTCGTG AACCCGACTA TTTCATGGCT
CGTAAAGTTA GTGATGTACT AATATATTCC CCTCACTCCC CTTCCACTTT TGCACTCAAC TCAAGCCATC ATTCACAATC
GATCTCCCTC TCTGCATTTT CTATTTCTCC TTTATCTGCA AATAGCAGCA AATGGCTCGG CTTAACCTCA TCCTTGTCTG
GTTATTTTTC TCCACTCTCT GTCTTTATTA TTGTCCTTCC TCTGCTCAGC TTAGTCGACA CCACTACGCA AAAACATGCC
CCAATGTCGA AAACATCGTC AGAGAAGCAG TTAAAAAGAA ATTTCATCAA ACATTCGTCA CGGTCCCTGC TACCCTCCGT
CTCTTCTTCC ACGATTGCTT CGTGCAGGGT TGTGATGCTT CGGTTTTGGT TGCGTCCACG GGAAACAACA AAGCAGAGAA
GGATCACCCT GATAATCTTT CACTTGCCGG AGATGGGTTT GACACGGTGA TTAAGGCAAA AGCAGCAGTG GATGCAGTTC
CGCTGTGTAG GAACAAAGTT TCGTGTGCTG ATATTTTAGC CATGGCAACA CGAGATGTTA TTGCACTGGC TGGTGGGCCT
TTCTACGAAG TTGAATTGGG AAGATTTGAC GGGCTAAGAT CTAAAGCTTC AGACGTAAAC GGGAGGCTGC CTCAGCCAGA
GTTCACCTTG AACCAGCTCA ATTCACTGTT TGCGGCGAAC GGTCTCACCC AGACAGAAAT GGTAGCCCTT TCAGGTGCGC
ACACTGTGGG ATTCTCCCAT TGCAACAAGT TCTCAAAGAG AGTGTATAAT TTCAAGAGCA AAAGTGGAGT GGACCCTGCA
CTGAACGAGA AATACGCATC ACAGCTAAAG TCAATGTGCC CAAGGAATGT GGATCCAAGG ATTGCCATCG ATATGGACCC
AACCACACCA CGAGCATTCG ACAATGTTTA CTACAGAAAT CTTCAGCAAG GGAAGGGCCT CTTCACCTCT GACCAAGTTC
TCTTCACGGA TTCAAGGTCC AAGGCCACCG TCAATGCTTT TGCCAGTAGC AGCAAAATCT TCCGTGCCAA TTTCGCCGCT
GCCATGACCA AATTGGGTCG AGTCGGAGTA AAAAATGCAC AGAATGGCAA CATTCGTACA GATTGTTCAG TCATCTAATT
TTCCACAAAC AACACATCCT CAGGGATTCG TTGTGTATAT TAGGTTTCCT TTATGTTTAA AATAACAAGT ATTGAAAGAA
TTTAATTTAT CACCTTCCTC TGTTTTGTTT TTTGTTTTCG TTCTTCCTCT TATATTATCA GATATTTTCC AGACATATTA
ACATATTAGT GTGGATGAAA CATCAGAATA GTGTTTTTTT CGAATTCACA TAGGTTGCAG CTTACCTTAT CTCGGAATTG
CATATTCTTA 

>Vigan.10G185900.01
ATGGCTCGGC TTAACCTCAT CCTTGTCTGG TTATTTTTCT CCACTCTCTG TCTTTATTAT TGTCCTTCCT CTGCTCAGCT
TAGTCGACAC CACTACGCAA AAACATGCCC CAATGTCGAA AACATCGTCA GAGAAGCAGT TAAAAAGAAA TTTCATCAAA
CATTCGTCAC GGTCCCTGCT ACCCTCCGTC TCTTCTTCCA CGATTGCTTC GTGCAGGGTT GTGATGCTTC GGTTTTGGTT
GCGTCCACGG GAAACAACAA AGCAGAGAAG GATCACCCTG ATAATCTTTC ACTTGCCGGA GATGGGTTTG ACACGGTGAT
TAAGGCAAAA GCAGCAGTGG ATGCAGTTCC GCTGTGTAGG AACAAAGTTT CGTGTGCTGA TATTTTAGCC ATGGCAACAC
GAGATGTTAT TGCACTGGCT GGTGGGCCTT TCTACGAAGT TGAATTGGGA AGATTTGACG GGCTAAGATC TAAAGCTTCA
GACGTAAACG GGAGGCTGCC TCAGCCAGAG TTCACCTTGA ACCAGCTCAA TTCACTGTTT GCGGCGAACG GTCTCACCCA
GACAGAAATG GTAGCCCTTT CAGGTGCGCA CACTGTGGGA TTCTCCCATT GCAACAAGTT CTCAAAGAGA GTGTATAATT
TCAAGAGCAA AAGTGGAGTG GACCCTGCAC TGAACGAGAA ATACGCATCA CAGCTAAAGT CAATGTGCCC AAGGAATGTG
GATCCAAGGA TTGCCATCGA TATGGACCCA ACCACACCAC GAGCATTCGA CAATGTTTAC TACAGAAATC TTCAGCAAGG
GAAGGGCCTC TTCACCTCTG ACCAAGTTCT CTTCACGGAT TCAAGGTCCA AGGCCACCGT CAATGCTTTT GCCAGTAGCA
GCAAAATCTT CCGTGCCAAT TTCGCCGCTG CCATGACCAA ATTGGGTCGA GTCGGAGTAA AAAATGCACA GAATGGCAAC
ATTCGTACAG ATTGTTCAGT CATCTAA

>Vigan.10G185900.01
MARLNLILVW LFFSTLCLYY CPSSAQLSRH HYAKTCPNVE NIVREAVKKK FHQTFVTVPA TLRLFFHDCF VQGCDASVLV
ASTGNNKAEK DHPDNLSLAG DGFDTVIKAK AAVDAVPLCR NKVSCADILA MATRDVIALA GGPFYEVELG RFDGLRSKAS
DVNGRLPQPE FTLNQLNSLF AANGLTQTEM VALSGAHTVG FSHCNKFSKR VYNFKSKSGV DPALNEKYAS QLKSMCPRNV
DPRIAIDMDP TTPRAFDNVY YRNLQQGKGL FTSDQVLFTD SRSKATVNAF ASSSKIFRAN FAAAMTKLGR VGVKNAQNGN
IRTDCSVI*