GBrowse Details

Vigan.10G180600.01

Basic Information:
Name: Vigan.10G180600.01
Multiple alignment
Variant Information
Position: Chr10:23564759..23569309 (+ strand)
Length: 4551
Functional Information:
Description: Similar to Uncharacterized protein. [I1J991, Glycine max]
GO: Molecular Function: adenyl nucleotide binding (GO:0030554)
InterPro: CBS domain (IPR000644)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:62.62,27.80,7.82,97.38,8.49,15.35,9.78,8.79
Arabidopsis thaliana homolog: AT4G36910.1
Automatic updates:
Name: BT092214 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-10I20 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:23564759..23565142 (+ strand)
Length: 384
Type: five_prime_UTR
Position: Chr10:23565143..23565319 (+ strand)
Length: 177
Type: CDS
Position: Chr10:23565880..23565967 (+ strand)
Length: 88
Type: CDS
Position: Chr10:23566091..23566155 (+ strand)
Length: 65
Type: CDS
Position: Chr10:23566970..23567018 (+ strand)
Length: 49
Type: CDS
Position: Chr10:23567204..23567256 (+ strand)
Length: 53
Type: CDS
Position: Chr10:23568425..23568540 (+ strand)
Length: 116
Type: CDS
Position: Chr10:23568634..23568691 (+ strand)
Length: 58
Type: CDS
Position: Chr10:23568773..23568847 (+ strand)
Length: 75
Type: CDS
Position: Chr10:23568848..23569309 (+ strand)
Length: 462
Type: three_prime_UTR

>Vigan.10G180600.01 class=Sequence position=Chr10:23564759..23569309 (+ strand)
TCACAATCTT AAGCAAGAAC CGTATGATAA AATTAAATGT TTGAATGAAA AATTTCGTAG AAAATATTGA GACAGAGTTG
ATCGAAGAAG AATGAAACAC GTGAAAATGG AAGAGTTTTA ATCTGGTGGT GGCGAACATC TTAAGGAAGA AGGAATTACG
AATAACTGAT ATTTTGACGA CAGCAGCAAA CCAGGCCAAA ATTTGTAGGG ATATTTAAAG ATATTTTTAG AATTATATTG
GTAGGCGATG GAGGGGAGAG AAAAGAAATT GACGGTGGAT TTTGTGTGTT TGATATCTGC GGATTAGAGT GAGAAGTCTG
AACCCCCAAA ACAAACAAAC AAAGCCTCTC AATTCCGAAT CGAGTCCAAG CAAACTCCCA ACAAATGGAC TCGCTTCTCT
TCCACTCCCA TCTCCATACT CTTCCTCCGC TTTCCTCCGC CGCTCACCGT CCTCTCTACC AGCCTCTCAC CGCCGCCGCT
TTCCCCCGCT CTTCCCCTCT CCGGAGCTTC CGTCCCCCGC CGCTTCTCGC CGCCAACACC CTCACCGCTA ATTCAGTCTC
GGTATCTCTT CTTATTCTTA TTCTTCTCCT CAATTCCATC CCTGTTTGCA AATTGAGCAA AGCATGTTCT TACCTCGGTA
CCGAATTTTC TCTATTAGCT ACGGCACCGT TAGGATTGGA AATATATTAA TATTTTAGAT TATTGTTGAC AGATTTAATT
CATTTCCGTT ACGCTCACTT GCTGTAGTTG CGCGGATTTT GGTTAAGACA CTGTGAATTT CATTTCGCGG GGTTTTTAAT
TCTATATGTT TTTTCTTTTC TTTTTATTGT GTTATAGCGT TATAGCTTGT AGTATGCAGT TAGGGCGCGT GTAGCTATTT
TTAATTCTTA AGAGGTACCT TCTTCGACGG TGCAGTGATG TAAGTATTTT GAACCTAGCT TCATGCTTTA GTATGAACTG
TCAGTGGATT AGTCTCTTTA TACATGGCAA AATCATGAAC AACTTTTTTT TTTCGTTTTT GGCCTGAGCC ATTCTAGTGA
TTCACCATGT ATGATGTACC AATTCATATA AATATAGAGA CCACTTTTCA CATGGCATGT GTTTTTGGAC ATTACATGCA
GCCAAGAAGT GGACTGTACA CTGTTGGTGA CTTTATGACA AGGAAAGAGG ATTTACATGT GGTGAAACCC ACAACTTCTG
TCGACGAAGG TATATTTCAT CGTCGTTTCA TGTTTTATTT CATGGCATAA GTGTTTTCCA TTTTTTTTTT ATTTGTTGTG
AAAGGAATGG GGGTTTTATA TTTTAATTTC TAAAAGTGTT ATTTTGCAAC AGCTTTGGAT ATTCTTGTTG AGAAAAGGAT
AACTGGTTTT CCTGTGATAG ATGATAACTG GAAACTGGTG AGTTTTTTGT AGCCGTTTTC GTTTTTTCTC TTTTACTTGG
TTTATATGTT TAATAAGTCT CTACCATATT TATTACTAAA ATCTTTGCAA TTTTCCATTT TCATTTTATC TTATTTTTTT
CAAAATACAC TGTTTGACTG TCATATCATG AGAGAAATAA GGTTATGATT TACACACACA ACCTTGACAT ACTGCTAAGG
TAAAATGTTG AGATCAAGTG GTTACAGTTT CAAGTCAGAG AAATTACCTC TCCACACACA TAAGGGTTAG GTGATATAAG
TTTGATGTGG GCGCCTACAC CAGACAGCCT TGAGAATTAC TTTGTTTTTT TTTCTCTTTT TGAAACCATT GCTCTATAAA
ATATGCCAGT ATGTGCCTTT GCAGTTTTAA CAAAGAAATT CTCAAGACTG GTTAATTTTG ATTTGATTAT GAAAATATCA
TTTTAAAAAC CTTTCTAATG TGAATATAGA TAAAACTTTG TTATTGGCAG CGTCTCTGGC TAAAATCCAG TTGATGCTGA
TTTATTCATT TAATGATGAA TCCGAAGATT CTCCACGAAC ATTTTTTCCC TTTTGACTAT TGTAACTATT TAAAACTCTA
TGCATTCAGC AAGTCTAGTT GAATGCCGGT TATCCCTCTA ACAACTGCAT CTGATGGCGA CAACCTTACA GAATGTATCT
GTAATTGCTC ATAGTTTATT ACTTCAGTTC TTCATTTGTA TAATGAAATT TGCATATGAC TTTAACTTAG CAGAACGTTG
CTGGACTAAT TTTCACAGAA ATTATTCTAA AGATTTATTT ATACCCTGCA GGTTGGTGTT GTTTCAGATT ATGACTTGTT
AGCACTGGAC TCTATATCAG GTAAATTATT ATTTTTTTAG AAATAAACAT CTCCTTTATC ATTGGTTGTT AGTGTGATTT
TCACCGCGTT CAAAACTTAT CAGCACTCTC ATGTCACAGG GCAACAAAAA AATATTTTTA TGACTTTTTT ATGCGCTTCC
ATCCCCAAAC CCTATTGCTC AGATTAAGTG TTATGCTGAT TTCAGGTCAC GGGCTAAAGG ATAACAGCAT GTTTCCAGAA
GTTGATAGTT CTTGGAAAGT ATGTTCTTGC TTCTTTCTGT TATAGTTAAT TCATCTTCAC AGGTCGTATT TTAGTATTGT
GTCGTTTTCA TGGTGTTAAT ACTTAAAATT ACCAAATAAG CTCAATTTAC TAAGCTGATA TTTTGGTAAT CAGACCTTTA
GGGAGCTAGG TTGGTCGGGA CTGAAAAAGC AAAACCACAA AGTATAACTG GACATTTCTA CCAGAATACC AACGATTTCT
TATAGAAAAT TCTACAATTC ATTTTTTTTA ATATTTATTC TTTCACCAAT TTCATCAAGT AAACTGAAAA GCCAGATAAA
CTGACATCTT TAAATAAAAT AAATAGAAAA ACACTATTGG CTTCCCCCTT TGTTGCTTTG TTTTCATTCT TCTTCTGTTA
CAGGGTCTTT GCACAGACAG ACACTCTACT CCCTCTATGC TTCTTAATTA GCTATTCAAT TGTCTTGTGT TCATCCATCT
AAAATTGAGG CTTCACACAA TATGTCGATC ACTTTATGTG CTCCTGATTC AGTTTTTTGT TCTGAATTAT GAAATAACAT
ACGATTCTGT TTCTTGGAAC TCAGTTGAAT GGTTTAGTCA GTTCCTAGTT AGAAGTTATA AACGTTTTTT CAATTCCTAT
ACGTTGTTTA AATATGCCTC AAGCTATTTT TGAACTTGTC TTTGAACTTA CTATTTAATA TGATTTGTAA TTTCATTATT
ATAAATAGCT TGACAATTCA TAATTTGATA ACACTGCCTT CAAAATCTAT AATAGCTCGT CTTATTAAGC ATGGTGCTGC
TTGTTAAGAT ATGGTATTAA TTATCCAAAG ACATACTTCT CTAAGCATGT CTGTTGATCC CCTTTTTTCC CTCAGTTACG
TTATTAATTT GAAGCAGTCT CAACCTACAC GAAATGTTTG CGTGGTAATC ATGTGAAATA TCCCATATAG ACAACTAAGT
GACACTGCAG AGTCTAATAC GCCCATGGGT ATTTCGAAGA GTCATATGTC GAATACGGAC AAAGCCTTTC CCTTTTGACT
GGTCATGTTT CATATATGGT AATGATTGGA TTTGAAGTCG ACGGGTTGCA TTGCGTGTTG CATCTCAATT GCTACTAGTT
AATTCTATTT AGCGATGGTC TAGTTAAATA GAGCACCATT TTTGCTGATA TTATGAGCTC TTGCAGACTT TTAACGAGAT
TCAAAAGCTG CTCAGTAAGA CCAACGGAAA ATTGATTGGT GAATTGATGA CCACTGCCCC TATGGTCGTT CGTGAGACCA
CGAATCTTGA GGATGCTGCG AGGTTCTTCC ATGTTTTTCC CTGTTTAACT TTGTTTTTTA GTATATTTTA AGCCGCAAAT
AAAAAAAGAT GACCTTTTTA AATTTCCATC TTTAGGTTGT TGCTAGAAAC CAAATTTCGA CGCCTTCCTG TTGTAGATGC
TGAGGGTAGA CTGGTAAGAT AGTCGTCCAA TCTTGTTATA TCTGTGTTTG TTTTAACTTC AGTGTTTTTA AACGGTCATT
ATTAATATCT GAAGGTCGGG ATTATCACGA GAGGAAATGT TGTAAGAGCC GCACTGCTAG TGAAACGAGC AAACCAGAAT
AAAGCATGAT AGGATTTAGA TGGTCATTCC ATAATTTGTT GCTGGATTTC ATGCAGTAGT TGGATTGAAG TGTATACAGA
AGCTTCGCTT AAATTAAAAT TAAAATTAAA ATTTTGGCTT AGGCATGTAT ATGTTATTGT TTTGCTATTT ACAGAGATGT
TTATCATTGG CAATATTTCA AAAGGGCAAT TATTATTCTT AATGATCTCA TTGTAATTTA TATTGGCCGC CTTGGTGATA
ATGATGTTGA AAATGTTGTA AATTGGCATA CGATTTTCAA CCGGCATTAA TCTACCGCCA TACTTACCAC GTCTGTTAGT
AGTTGAGCTG AAGCGATGAC TGGTCTTGGT CCGTCACTGT AATAAAACTC ATGACTAGAT GTTGATCAGA ACAGTTGGCA
ATAAAAGGTC ATGCTCATCA GAATAGTTGA CAATAACAGC CTGGGACCTG TCTTCTGCTT CTCCATTTTA T

>Vigan.10G180600.01
TCACAATCTT AAGCAAGAAC CGTATGATAA AATTAAATGT TTGAATGAAA AATTTCGTAG AAAATATTGA GACAGAGTTG
ATCGAAGAAG AATGAAACAC GTGAAAATGG AAGAGTTTTA ATCTGGTGGT GGCGAACATC TTAAGGAAGA AGGAATTACG
AATAACTGAT ATTTTGACGA CAGCAGCAAA CCAGGCCAAA ATTTGTAGGG ATATTTAAAG ATATTTTTAG AATTATATTG
GTAGGCGATG GAGGGGAGAG AAAAGAAATT GACGGTGGAT TTTGTGTGTT TGATATCTGC GGATTAGAGT GAGAAGTCTG
AACCCCCAAA ACAAACAAAC AAAGCCTCTC AATTCCGAAT CGAGTCCAAG CAAACTCCCA ACAAATGGAC TCGCTTCTCT
TCCACTCCCA TCTCCATACT CTTCCTCCGC TTTCCTCCGC CGCTCACCGT CCTCTCTACC AGCCTCTCAC CGCCGCCGCT
TTCCCCCGCT CTTCCCCTCT CCGGAGCTTC CGTCCCCCGC CGCTTCTCGC CGCCAACACC CTCACCGCTA ATTCAGTCTC
GCCAAGAAGT GGACTGTACA CTGTTGGTGA CTTTATGACA AGGAAAGAGG ATTTACATGT GGTGAAACCC ACAACTTCTG
TCGACGAAGC TTTGGATATT CTTGTTGAGA AAAGGATAAC TGGTTTTCCT GTGATAGATG ATAACTGGAA ACTGGTTGGT
GTTGTTTCAG ATTATGACTT GTTAGCACTG GACTCTATAT CAGGTCACGG GCTAAAGGAT AACAGCATGT TTCCAGAAGT
TGATAGTTCT TGGAAAACTT TTAACGAGAT TCAAAAGCTG CTCAGTAAGA CCAACGGAAA ATTGATTGGT GAATTGATGA
CCACTGCCCC TATGGTCGTT CGTGAGACCA CGAATCTTGA GGATGCTGCG AGGTTGTTGC TAGAAACCAA ATTTCGACGC
CTTCCTGTTG TAGATGCTGA GGGTAGACTG GTCGGGATTA TCACGAGAGG AAATGTTGTA AGAGCCGCAC TGCTAGTGAA
ACGAGCAAAC CAGAATAAAG CATGATAGGA TTTAGATGGT CATTCCATAA TTTGTTGCTG GATTTCATGC AGTAGTTGGA
TTGAAGTGTA TACAGAAGCT TCGCTTAAAT TAAAATTAAA ATTAAAATTT TGGCTTAGGC ATGTATATGT TATTGTTTTG
CTATTTACAG AGATGTTTAT CATTGGCAAT ATTTCAAAAG GGCAATTATT ATTCTTAATG ATCTCATTGT AATTTATATT
GGCCGCCTTG GTGATAATGA TGTTGAAAAT GTTGTAAATT GGCATACGAT TTTCAACCGG CATTAATCTA CCGCCATACT
TACCACGTCT GTTAGTAGTT GAGCTGAAGC GATGACTGGT CTTGGTCCGT CACTGTAATA AAACTCATGA CTAGATGTTG
ATCAGAACAG TTGGCAATAA AAGGTCATGC TCATCAGAAT AGTTGACAAT AACAGCCTGG GACCTGTCTT CTGCTTCTCC
ATTTTAT

>Vigan.10G180600.01
ATGGACTCGC TTCTCTTCCA CTCCCATCTC CATACTCTTC CTCCGCTTTC CTCCGCCGCT CACCGTCCTC TCTACCAGCC
TCTCACCGCC GCCGCTTTCC CCCGCTCTTC CCCTCTCCGG AGCTTCCGTC CCCCGCCGCT TCTCGCCGCC AACACCCTCA
CCGCTAATTC AGTCTCGCCA AGAAGTGGAC TGTACACTGT TGGTGACTTT ATGACAAGGA AAGAGGATTT ACATGTGGTG
AAACCCACAA CTTCTGTCGA CGAAGCTTTG GATATTCTTG TTGAGAAAAG GATAACTGGT TTTCCTGTGA TAGATGATAA
CTGGAAACTG GTTGGTGTTG TTTCAGATTA TGACTTGTTA GCACTGGACT CTATATCAGG TCACGGGCTA AAGGATAACA
GCATGTTTCC AGAAGTTGAT AGTTCTTGGA AAACTTTTAA CGAGATTCAA AAGCTGCTCA GTAAGACCAA CGGAAAATTG
ATTGGTGAAT TGATGACCAC TGCCCCTATG GTCGTTCGTG AGACCACGAA TCTTGAGGAT GCTGCGAGGT TGTTGCTAGA
AACCAAATTT CGACGCCTTC CTGTTGTAGA TGCTGAGGGT AGACTGGTCG GGATTATCAC GAGAGGAAAT GTTGTAAGAG
CCGCACTGCT AGTGAAACGA GCAAACCAGA ATAAAGCATG A

>Vigan.10G180600.01
MDSLLFHSHL HTLPPLSSAA HRPLYQPLTA AAFPRSSPLR SFRPPPLLAA NTLTANSVSP RSGLYTVGDF MTRKEDLHVV
KPTTSVDEAL DILVEKRITG FPVIDDNWKL VGVVSDYDLL ALDSISGHGL KDNSMFPEVD SSWKTFNEIQ KLLSKTNGKL
IGELMTTAPM VVRETTNLED AARLLLETKF RRLPVVDAEG RLVGIITRGN VVRAALLVKR ANQNKA*