GBrowse Details

Vigan.10G143500.01

Basic Information:
Name: Vigan.10G143500.01
Multiple alignment
Variant Information
Position: Chr10:20249903..20253040 (+ strand)
Length: 3138
Functional Information:
Description: Similar to Uncharacterized protein. [K7K449, Glycine max]
GO: Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079)
Biological Process: regulation of cell cycle (GO:0051726)
Cellular Component: nucleus (GO:0005634)
Molecular Function: protein kinase binding (GO:0019901)
InterPro: Cyclin, C-terminal domain (IPR004367)
Cyclin, N-terminal (IPR006671)
Cyclin-like (IPR013763)
Cyclin A/B/D/E (IPR014400)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,7.98,1.84,5.70,3.08,5.82,3 .58
Arabidopsis thaliana homolog: AT1G20610.1
Automatic updates:
Name: NM_001365106 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max G2/mitotic-specific cyclin-1-like (LOC100798068), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:20249903..20250189 (+ strand)
Length: 287
Type: five_prime_UTR
Position: Chr10:20250190..20250244 (+ strand)
Length: 55
Type: CDS
Position: Chr10:20250361..20250487 (+ strand)
Length: 127
Type: CDS
Position: Chr10:20250599..20250655 (+ strand)
Length: 57
Type: CDS
Position: Chr10:20250885..20250930 (+ strand)
Length: 46
Type: CDS
Position: Chr10:20251039..20251314 (+ strand)
Length: 276
Type: CDS
Position: Chr10:20251644..20251733 (+ strand)
Length: 90
Type: CDS
Position: Chr10:20251822..20252043 (+ strand)
Length: 222
Type: CDS
Position: Chr10:20252136..20252234 (+ strand)
Length: 99
Type: CDS
Position: Chr10:20252318..20252496 (+ strand)
Length: 179
Type: CDS
Position: Chr10:20252578..20252722 (+ strand)
Length: 145
Type: CDS
Position: Chr10:20252723..20253040 (+ strand)
Length: 318
Type: three_prime_UTR

>Vigan.10G143500.01 class=Sequence position=Chr10:20249903..20253040 (+ strand)
ATTTAGGACA GAGAGACAAC GTAGAAAAAA TAGAAAAAAA AAATAAAGTA ATGGTGTTGC CAGCCAAACG ATCCAACGGT
CATTAGTGAC TAGCCGTTGA GTTTTGAAAA GTGGTCTCAC CAGACAAATA CCCCATGGTT TCAGTCCTGC AGTGTAGTGT
TTGTAGTGTC ACTGTTAATT AGTGTAAAAG ATTACCCATC CACTTCCATT TCCTCCTGCA TTACATGCCC TTCTCCCTGT
AATTATAGTC TTGTGGGTGG TTCTTTGTTT CTGTGTGTTC ATCCACAATG GTCATATCAG ATGAGAACAG ATCTAAATCA
GTGAACCCCA CAAGTTTTCA AGGTATTAAG TGAAGGTTTC GGTTTCAATG TTGATGCAAG ATTCAAGATT TAATGATAAA
AACAACACGG CTAATGAGGG TTTTTATTTA TTAATTTTTT GTGTGGATGT TGTGATAGGA GGGATGAATT GTGGGGGAAA
CAGAAAGGTG GGGCAAAACA GAAGGGCGTT GAGCGTGATC AATCAGGATC TGGTGGCGGA AGGGAGACCT TACCCTTGTG
TTGTTAACAA GAGAACATTG GCAGAGTAAT TTTCTTTTTT TAATCTTTTT CGGTTGGGAC AAGCTGTTTT TTTTTCTATT
GAGATTCTTC AGTTTTTTTT TGTCTGTGAT GTTGATGGTG TGGTTTTCAC TTTCAGAAAA CAAGATGTGT GTGAGAAGAA
GCAGGCGGAT CCGGTGCATC GACCCATCAC AAGGTTAGAG GATATAACCT TTAGTGTGAT TTTGAGTTTT GTTTGGGTGG
ATGAAAAAAG TGAAAATAAG TATTTGAATT TTGAAATTGA AGTGTGTTTC AATGAGTGTA GTGTATAGAC CCCTTCGGTT
TTTCACTAGA GGGAAAAAAA ATCGATTAAT GAGACTTTTC TGTTCTTTAA TTTTAGACAC AAGTTTCAAT GTAACAGATA
GTTGATTTTG GTTTACTTTT AGGAGGTTTG CTGCACAGAT TGCCAGCACA CAGCAAAATC GTGCTGAGGT ACTTTTATGA
TGAAATTTTA TGCTTTGCAC ATTGCACATA TCCTTTGACA ATTTGAAAGT TGAAACTGAG ATTTGAGTGG TGGGATCAAT
TTGAATGAAT GAACAGGGAA CCAAGAAGTC AAACTTGGGA AATTCAAATT CGAATGGATT TGGAGAGGTT ATATTTGTTG
ATGATGAACA CAAGCCAACG GATGACCAAC CAGTGCCAAT GACTTTAGAG CAGACAGAGC CAGTGAATAA TGAATTAGAT
CAGATGGAGG AAGTTGAGAT GGAGGATATA ATTGATGAGA CAGTTTTGGA CATTGATATA TGTGACGCAA ATAATCCCCT
TGCAGTGGTG GACTATATAG AAGATCTTTA CGCCTACTAC AGAAAAATGG AGGTAAATTT GGAATTGAAT AGTTTGAATT
CATTACACTT TTCTGACGGT TTCAAAACAG TTTAACTTTA AATGGGGATA CTGTCTGAAT TCTAATTTGT CAGTTGAACT
TTTTTGAGTA CTGCATTCAA AAGTTGCATT TTCTGCTAAA GAAAATTCAT TATATTGTAT TTATATAGCT TTTTACTTTT
GAAAATTTTC TCTGTAGAGT TTAATTCACT TTGATAGTTT TAGAAATCAA AAGGGATTCC AGAATGGCAG CTAAACTAAC
ATGGGAATGC CTTTGTATTG AATTTTGGTT ATGATAACTA AACAACATCG CTACAATGCA GGGTTCTAGC TGTGTCTCAT
CCGATTATAT GACACAGCAG TTTGACATTA ATGAAAGGAT GAGGGCTATA CTTATTGACT GGCTTATTGA GGTAAACCAA
CTGTGCTACA ATGATCCTTG TGGATTTTGT TTTGTTTTCA GTGAATTCTA AACTCCCTAT GTTTGTTTTG ATCCTTCAGG
TGCACGACAA ATTTGACCTC ATGCACGAGA CATTGTTTCT CACAGTTAAT CTCATAGATA GATTTTTGGC AAAGCAGACA
GTTGTAAGAA AGAAGCTTCA GTTGGTTGGA CTAGTTGCAA TGCTTCTGGC ATGCAAGTAT GAAGAAGTTT CAGTTCCTGT
GGTGGGGGAT CTAATTCTCA TATCAGACAA AGCATACACA AGGAAGGAAG TTCTGGAGAT GGTAGATTTG TTTGCCTCGT
GACACAGCAG ATTAACTGTT TGACAGATTC GTGTGGCTGA ACTAACTGAT TTTGTTCATT GTGAACTATG CAGGAGAAGT
TGATGGTCAA CACATTGCAG TTTAACATGT CTGTGCCAAC AGCATATGTT TTTATGAAAA GATTCCTAAA GGCAGCTCAA
GCAGACAGGA AGGTCAGTAT TATTCTTCAT GTAGTTCTGC CAAAGATTCT GAGTTTAGAA GCATCTAACT TTTTGACTCT
ATTATTCCTC AACAGCTTGA GCTATTGGCT TTCTTCCTAG TAGAGCTATC TCTAGTGGAA TATGAGATGC TGAAGTTCCC
TCCATCCTTG CTAGCAGCAG CTGCTATTTA TACAGCTCAA TGCTCCATTT ATGGCTTGAA ACAATGGAGT AAAACATGTG
AATGGCACTC CAATTACTCA GAAGATCAGC TATTGTAAGT GGTGCATAAT TTAATGTTCC AATTACCCAA TGGTGTTGTG
TAGATAATAC TAATGTGCTT GATTGTGACT GGCAGAGAGT GCTCTACCTC GATGGTTGAT TTTCATCAGA AGGCTGGAAA
AGGGAAACTT ACTGGGGTAC ATAGGAAGTA CTGTTCATCT AAATTTAACT ACACTGCAAA ATGTGAACCC GCACATTTTC
TTCTGGAGGA CTCGTTGTAG CAGGCGGCCA TGTATAAAGC CACTAACATA ACATCATCAT GATGATATGA TATGATACAC
TTGACTTTGA TAATTGGGGG GCCATTTGGT TAATGGATGC AGGCGGACAC ATGAATTTGA GCAACTTGGG TTGCACTTAT
ATGTTGTATC TCAAGTGTCG GGTTTGTCTT ATGTATTTTG TTGTTCTACT CATGTTATTT TTCCTTCCTT TTACTTTCTG
TTATGTTCCA AGTGAACAGA ACATACTTGA GTCGTGTAAT TTCTCTTTGT TCCCATTGAA CAAAATAATG GAAACCATGA
CATAAAAACA ACTTCATT

>Vigan.10G143500.01
ATTTAGGACA GAGAGACAAC GTAGAAAAAA TAGAAAAAAA AAATAAAGTA ATGGTGTTGC CAGCCAAACG ATCCAACGGT
CATTAGTGAC TAGCCGTTGA GTTTTGAAAA GTGGTCTCAC CAGACAAATA CCCCATGGTT TCAGTCCTGC AGTGTAGTGT
TTGTAGTGTC ACTGTTAATT AGTGTAAAAG ATTACCCATC CACTTCCATT TCCTCCTGCA TTACATGCCC TTCTCCCTGT
AATTATAGTC TTGTGGGTGG TTCTTTGTTT CTGTGTGTTC ATCCACAATG GTCATATCAG ATGAGAACAG ATCTAAATCA
GTGAACCCCA CAAGTTTTCA AGGAGGGATG AATTGTGGGG GAAACAGAAA GGTGGGGCAA AACAGAAGGG CGTTGAGCGT
GATCAATCAG GATCTGGTGG CGGAAGGGAG ACCTTACCCT TGTGTTGTTA ACAAGAGAAC ATTGGCAGAA AAACAAGATG
TGTGTGAGAA GAAGCAGGCG GATCCGGTGC ATCGACCCAT CACAAGGAGG TTTGCTGCAC AGATTGCCAG CACACAGCAA
AATCGTGCTG AGGGAACCAA GAAGTCAAAC TTGGGAAATT CAAATTCGAA TGGATTTGGA GAGGTTATAT TTGTTGATGA
TGAACACAAG CCAACGGATG ACCAACCAGT GCCAATGACT TTAGAGCAGA CAGAGCCAGT GAATAATGAA TTAGATCAGA
TGGAGGAAGT TGAGATGGAG GATATAATTG ATGAGACAGT TTTGGACATT GATATATGTG ACGCAAATAA TCCCCTTGCA
GTGGTGGACT ATATAGAAGA TCTTTACGCC TACTACAGAA AAATGGAGGG TTCTAGCTGT GTCTCATCCG ATTATATGAC
ACAGCAGTTT GACATTAATG AAAGGATGAG GGCTATACTT ATTGACTGGC TTATTGAGGT GCACGACAAA TTTGACCTCA
TGCACGAGAC ATTGTTTCTC ACAGTTAATC TCATAGATAG ATTTTTGGCA AAGCAGACAG TTGTAAGAAA GAAGCTTCAG
TTGGTTGGAC TAGTTGCAAT GCTTCTGGCA TGCAAGTATG AAGAAGTTTC AGTTCCTGTG GTGGGGGATC TAATTCTCAT
ATCAGACAAA GCATACACAA GGAAGGAAGT TCTGGAGATG GAGAAGTTGA TGGTCAACAC ATTGCAGTTT AACATGTCTG
TGCCAACAGC ATATGTTTTT ATGAAAAGAT TCCTAAAGGC AGCTCAAGCA GACAGGAAGC TTGAGCTATT GGCTTTCTTC
CTAGTAGAGC TATCTCTAGT GGAATATGAG ATGCTGAAGT TCCCTCCATC CTTGCTAGCA GCAGCTGCTA TTTATACAGC
TCAATGCTCC ATTTATGGCT TGAAACAATG GAGTAAAACA TGTGAATGGC ACTCCAATTA CTCAGAAGAT CAGCTATTAG
AGTGCTCTAC CTCGATGGTT GATTTTCATC AGAAGGCTGG AAAAGGGAAA CTTACTGGGG TACATAGGAA GTACTGTTCA
TCTAAATTTA ACTACACTGC AAAATGTGAA CCCGCACATT TTCTTCTGGA GGACTCGTTG TAGCAGGCGG CCATGTATAA
AGCCACTAAC ATAACATCAT CATGATGATA TGATATGATA CACTTGACTT TGATAATTGG GGGGCCATTT GGTTAATGGA
TGCAGGCGGA CACATGAATT TGAGCAACTT GGGTTGCACT TATATGTTGT ATCTCAAGTG TCGGGTTTGT CTTATGTATT
TTGTTGTTCT ACTCATGTTA TTTTTCCTTC CTTTTACTTT CTGTTATGTT CCAAGTGAAC AGAACATACT TGAGTCGTGT
AATTTCTCTT TGTTCCCATT GAACAAAATA ATGGAAACCA TGACATAAAA ACAACTTCAT T

>Vigan.10G143500.01
ATGGTCATAT CAGATGAGAA CAGATCTAAA TCAGTGAACC CCACAAGTTT TCAAGGAGGG ATGAATTGTG GGGGAAACAG
AAAGGTGGGG CAAAACAGAA GGGCGTTGAG CGTGATCAAT CAGGATCTGG TGGCGGAAGG GAGACCTTAC CCTTGTGTTG
TTAACAAGAG AACATTGGCA GAAAAACAAG ATGTGTGTGA GAAGAAGCAG GCGGATCCGG TGCATCGACC CATCACAAGG
AGGTTTGCTG CACAGATTGC CAGCACACAG CAAAATCGTG CTGAGGGAAC CAAGAAGTCA AACTTGGGAA ATTCAAATTC
GAATGGATTT GGAGAGGTTA TATTTGTTGA TGATGAACAC AAGCCAACGG ATGACCAACC AGTGCCAATG ACTTTAGAGC
AGACAGAGCC AGTGAATAAT GAATTAGATC AGATGGAGGA AGTTGAGATG GAGGATATAA TTGATGAGAC AGTTTTGGAC
ATTGATATAT GTGACGCAAA TAATCCCCTT GCAGTGGTGG ACTATATAGA AGATCTTTAC GCCTACTACA GAAAAATGGA
GGGTTCTAGC TGTGTCTCAT CCGATTATAT GACACAGCAG TTTGACATTA ATGAAAGGAT GAGGGCTATA CTTATTGACT
GGCTTATTGA GGTGCACGAC AAATTTGACC TCATGCACGA GACATTGTTT CTCACAGTTA ATCTCATAGA TAGATTTTTG
GCAAAGCAGA CAGTTGTAAG AAAGAAGCTT CAGTTGGTTG GACTAGTTGC AATGCTTCTG GCATGCAAGT ATGAAGAAGT
TTCAGTTCCT GTGGTGGGGG ATCTAATTCT CATATCAGAC AAAGCATACA CAAGGAAGGA AGTTCTGGAG ATGGAGAAGT
TGATGGTCAA CACATTGCAG TTTAACATGT CTGTGCCAAC AGCATATGTT TTTATGAAAA GATTCCTAAA GGCAGCTCAA
GCAGACAGGA AGCTTGAGCT ATTGGCTTTC TTCCTAGTAG AGCTATCTCT AGTGGAATAT GAGATGCTGA AGTTCCCTCC
ATCCTTGCTA GCAGCAGCTG CTATTTATAC AGCTCAATGC TCCATTTATG GCTTGAAACA ATGGAGTAAA ACATGTGAAT
GGCACTCCAA TTACTCAGAA GATCAGCTAT TAGAGTGCTC TACCTCGATG GTTGATTTTC ATCAGAAGGC TGGAAAAGGG
AAACTTACTG GGGTACATAG GAAGTACTGT TCATCTAAAT TTAACTACAC TGCAAAATGT GAACCCGCAC ATTTTCTTCT
GGAGGACTCG TTGTAG

>Vigan.10G143500.01
MVISDENRSK SVNPTSFQGG MNCGGNRKVG QNRRALSVIN QDLVAEGRPY PCVVNKRTLA EKQDVCEKKQ ADPVHRPITR
RFAAQIASTQ QNRAEGTKKS NLGNSNSNGF GEVIFVDDEH KPTDDQPVPM TLEQTEPVNN ELDQMEEVEM EDIIDETVLD
IDICDANNPL AVVDYIEDLY AYYRKMEGSS CVSSDYMTQQ FDINERMRAI LIDWLIEVHD KFDLMHETLF LTVNLIDRFL
AKQTVVRKKL QLVGLVAMLL ACKYEEVSVP VVGDLILISD KAYTRKEVLE MEKLMVNTLQ FNMSVPTAYV FMKRFLKAAQ
ADRKLELLAF FLVELSLVEY EMLKFPPSLL AAAAIYTAQC SIYGLKQWSK TCEWHSNYSE DQLLECSTSM VDFHQKAGKG
KLTGVHRKYC SSKFNYTAKC EPAHFLLEDS L*