GBrowse Details

Vigan.10G128500.01

Basic Information:
Name: Vigan.10G128500.01
Multiple alignment
Variant Information
Position: Chr10:18490593..18494032 (+ strand)
Length: 3440
Functional Information:
Description: Similar to Uncharacterized protein. [I1J849, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine-threonine/tyrosine-protein kinase catalytic domain (IPR001245)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.03,0.04,0.90,1.61,19.29,0.76,15.04 ,2.97
Arabidopsis thaliana homolog: AT1G61590.1
Automatic updates:
Name: NM_001253116 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine/threonine-protein kinase At5g01020-like (LOC100820300), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:18490593..18490876 (+ strand)
Length: 284
Type: five_prime_UTR
Position: Chr10:18490877..18491293 (+ strand)
Length: 417
Type: CDS
Position: Chr10:18492140..18492275 (+ strand)
Length: 136
Type: CDS
Position: Chr10:18492649..18492782 (+ strand)
Length: 134
Type: CDS
Position: Chr10:18492894..18493017 (+ strand)
Length: 124
Type: CDS
Position: Chr10:18493481..18493929 (+ strand)
Length: 449
Type: CDS
Position: Chr10:18493930..18494032 (+ strand)
Length: 103
Type: three_prime_UTR

>Vigan.10G128500.01 class=Sequence position=Chr10:18490593..18494032 (+ strand)
TAGTAATACT ACGTACAAAA AGACATTGGT GTATTGTGCA TGAAGACACG ACATAGATGA CAAATTAGAG AACAAAACAA
CTTACACATA AGTAAACAAA CATATGGAAA CAAATAATAA TGTCTGCAAA AATTACCAGA GTGGTTAGAG CAGTTGAAGA
AAGAATATCT TTTCCTAAGT CTCCATCAAA TGTAGGAAAA CTTTACCATA TATTGTACAA TATTCTTGGT ACTTATATTT
TGCAGAACAT CAGAATTCTT TCTCACAAGA CCTTAACTTA GGAAATGAAG GAACCATCAA AGGCATGGAG ACCCTTCACT
GCAAATTGCT GCTCCACAGA GGACCAAACC GTGTTCAAGA ACTTCAGCAG GTGCAAGCCT TCACGTTCTG ACTTGTCAAA
GAACATTGCT CCTTTGCCAT CGTTCAGGAG GCTCTCCTTC TCTGATCTCA GTCGTTCCTC GTCTGTGCGA ATCAATGAGG
ATCTTGCACA GTCTTTTGGG TCGGATTTGT TTGATTTTCA GCTGAGTGAG CTGCGTGCCA TAACTCAGAA TTTCAGCAGC
AACTTCTTGC TGGGAGAAGG AGGGTTTGGA ACTGTGCATA AGGGCTACGT AGATGATCAT CTCAGGCTTG GTTTGAAGGC
ACAACCTGTT GCTGTCAAGC TTCTTGACAT TGAAGGCTTG CAAGGACACC GTGAATGGCT GGTGAGTATC ACATTTATTC
TTCATTAACT ATTATATTAT GTTTTTACAG GAATTCTTTT CACTCTTAAA CTTAATTCAT TACTATTCCT TAACCTATTC
TAAAAATGAA TTAATAAAGT TCATTACTGA ATCATATTTA ACCCACCACT ATTGTATAAT TATCTTAAAC ACCATTCTTC
AATTACAAGT TTATTTTTTA GTGGTGTTTC ATCTTTTCTT TCACCAGATT CAATTTGAAT ATTAACTCGC TTGAGGAAAA
AAGAAACCTT TAATATATTC ATGTAATTAA ATTTACTAGT CATTATCAGG GTCGTTTAAT TTTGGTGGTG TAGTTGTTGG
AATCAGAATC TTGGCTATTT ATTTTTAGGA ATGAGTGTGA TGCAACTAGT GGGAGTTGAC TAAACCCATC ATCAACTCAT
TTGATTGGGC ATCCAAAGAG AAAAGTCAGG GAATTTTACA CTAGCTTACA AGACTTTAGC ATTGTCCTGC ACTATTATTA
TATCATTTTT GTGTTCATAT TTTATTATTT TGATTCTTGA AGGATGGATG CAAGTCAATC GCTTATAGTA CAAGAAAAGT
TAATTAAATT AGTATATATG CTGTAATGTA TAATAGTCTG CAATGACCTT TATTTATTAT ATCTGAGAGA AACTAGAGTA
AAGAAACAAG GATGATCCTA TTAGATGTCA GAAATGCATG GGACAATTTT ATTATGTTCT TTGTTTTTAT TTTTAATTTA
TCAAATTTCC ATCAATAGTG AAAAGAAATG AACTGTTTTG TATTTATTTT TATATTGAAA TTTGGGGAAT GAACCACGTA
TAAATGAATA ATTGCATTGG ATTGCAGGCA GAAGTGATTT TTCTTGGGCA GCTAAGACAC CCCAATTTGG TTAAGTTGAT
TGGGTATTGT TGTGAAGATG AAGAACGATT ACTTGTCTAT GAATTCATGC CACGAGGAAG TTTGGAGAAT CACCTCTTCA
GAAGTATGCA TCAAAATCCT TGTACATTTT TAACTTGTTT GATCTTCACT TGTTACTATT TTCTGTGTTC TAAAACAGTT
TACTTGGCAA ACAATTTATC ATCCAAATTC TGTTAAATTA TGAAAATTGT TTCCAATGCA AGTATTTAAA AAAACAAAAC
TACAGAAACA ACTGGGAGAT GTTTTTTAAT CTCTTCAAGT CCTCTCTGTT CTTATGCTGA AGAGACAAAT TCTTAGAAAA
CAGAAATGTG TTCATTTCAT ATGACAGAAT ACTTGCAATT GTGTTGAGGT AACAAAGAAA TTTGAGAAAG TAGAAATTTG
TTTCTAACAT TAAACAAACA ATGAGTTACT CAGTTACTCA GTGCATGTAA TTGCAGGGCT AACATCAATT CCATGGGGGA
CAAGATTAAA AATTGCAATA GGAGCTGCTA AAGGCCTTTC CTTCTTGCAT GGAGCTGAGA AGCCAGTCAT TTATAGAGAC
TTCAAGACTT CCAATGTTTT GCTTGATTCA GTACGTGATC AACTACCGAT CATTCTCTTT GTTATTGATT AAAACTGTAA
AATAACACAA CAAACTAAAT CCAATGAGTT TTTATGCATC ATCTGATTCT GTTTAAAATA GGAGTTCACA GCAAAATTGT
CAGATTTTGG ACTTGCTAAA ATGGGGCCAG AGGGATCCAA CACACATGTT TCAACCAGAG TAATGGGCAC TTATGGATAT
GCAGCACCAG AATACATCTC AACAGGTAGG ACTAATAAAT CTAATCTGTA CCTATTTTCT GGCATGCTTA TTACTTCCAT
AAGGAGGAAA AAAAAGGAAT TCAACTAATA ACTGATTTCA ATTGGGGATA AATTATTATA TGATTTACAA TCATGACCAA
TCTCCATATG GCATGTTGAT AATTCTTTTT GGAAAATTGA AAATGTTTGT CACTTAAAAA TCTGTGGGAT AAATCAGTCC
TATTACATGT TCATTATTTT TAAGAAAATT AGTTTTAAGA TGAGGTTTGC ATACACTTTT ATATTGTTTA TCTCTAATCG
ATGTAAAATC TCCAACAATT CTTTACATAG TTTGACATTT GCCTTTTGTT GATGAGAACT AAGTTTCATG TGGAGATTGG
TCAAACTATG TGGAACCAAC CATGTAATAG TTTATTATCA AATTTGGTAT GTTTTGCAGA TTTTAATGTA ACATATGATT
ATTTACAGGG CATTTAACAA CCAAAAGTGA TGTCTACAGC TTTGGGGTAG TCCTGCTAGA ACTGCTGACA GGAAGAAGAG
CAACGGACAA AACAAGACCA AAGACTGAGC AAAACCTTGT GGATTGGTCA AAACCTTACT TGAGTAGCAG TAGGAGGTTG
AGGTACATTG TCGATCCAAG GCTTGCAGGC CAATATTCTG TGAAGGGTGC AAAGGAAATT GCCCGTTTGG CATTGCAATG
CATAAGTTTG AATCCTAAAG ACAGACCAAG AATGCCAATG ATTGTTGAAA CTCTTGAAGG CTTACAACAG TACAAGGACA
TGGCTGTTAC CAGCGGACAC TGGCCAGTGT CACAAAAATC TACTAGGAAT AAAGTCTCCA ACAATAAGAC GAATGCCAAC
ACTAGAGCCG GTGCAAACCA CAAGCAACCA TCACCAGTTC TGAGCAAAAA AACTTGATTG CTACCTTTTA GAAGATTGCT
TTTTAATGAA GTATCATGTG GTGTAAGAGT AATTATCAAG CCACCCTATA TATATGTAAT TAAATGTATA AAACATAAAT

>Vigan.10G128500.01
TAGTAATACT ACGTACAAAA AGACATTGGT GTATTGTGCA TGAAGACACG ACATAGATGA CAAATTAGAG AACAAAACAA
CTTACACATA AGTAAACAAA CATATGGAAA CAAATAATAA TGTCTGCAAA AATTACCAGA GTGGTTAGAG CAGTTGAAGA
AAGAATATCT TTTCCTAAGT CTCCATCAAA TGTAGGAAAA CTTTACCATA TATTGTACAA TATTCTTGGT ACTTATATTT
TGCAGAACAT CAGAATTCTT TCTCACAAGA CCTTAACTTA GGAAATGAAG GAACCATCAA AGGCATGGAG ACCCTTCACT
GCAAATTGCT GCTCCACAGA GGACCAAACC GTGTTCAAGA ACTTCAGCAG GTGCAAGCCT TCACGTTCTG ACTTGTCAAA
GAACATTGCT CCTTTGCCAT CGTTCAGGAG GCTCTCCTTC TCTGATCTCA GTCGTTCCTC GTCTGTGCGA ATCAATGAGG
ATCTTGCACA GTCTTTTGGG TCGGATTTGT TTGATTTTCA GCTGAGTGAG CTGCGTGCCA TAACTCAGAA TTTCAGCAGC
AACTTCTTGC TGGGAGAAGG AGGGTTTGGA ACTGTGCATA AGGGCTACGT AGATGATCAT CTCAGGCTTG GTTTGAAGGC
ACAACCTGTT GCTGTCAAGC TTCTTGACAT TGAAGGCTTG CAAGGACACC GTGAATGGCT GGCAGAAGTG ATTTTTCTTG
GGCAGCTAAG ACACCCCAAT TTGGTTAAGT TGATTGGGTA TTGTTGTGAA GATGAAGAAC GATTACTTGT CTATGAATTC
ATGCCACGAG GAAGTTTGGA GAATCACCTC TTCAGAAGGC TAACATCAAT TCCATGGGGG ACAAGATTAA AAATTGCAAT
AGGAGCTGCT AAAGGCCTTT CCTTCTTGCA TGGAGCTGAG AAGCCAGTCA TTTATAGAGA CTTCAAGACT TCCAATGTTT
TGCTTGATTC AGAGTTCACA GCAAAATTGT CAGATTTTGG ACTTGCTAAA ATGGGGCCAG AGGGATCCAA CACACATGTT
TCAACCAGAG TAATGGGCAC TTATGGATAT GCAGCACCAG AATACATCTC AACAGGGCAT TTAACAACCA AAAGTGATGT
CTACAGCTTT GGGGTAGTCC TGCTAGAACT GCTGACAGGA AGAAGAGCAA CGGACAAAAC AAGACCAAAG ACTGAGCAAA
ACCTTGTGGA TTGGTCAAAA CCTTACTTGA GTAGCAGTAG GAGGTTGAGG TACATTGTCG ATCCAAGGCT TGCAGGCCAA
TATTCTGTGA AGGGTGCAAA GGAAATTGCC CGTTTGGCAT TGCAATGCAT AAGTTTGAAT CCTAAAGACA GACCAAGAAT
GCCAATGATT GTTGAAACTC TTGAAGGCTT ACAACAGTAC AAGGACATGG CTGTTACCAG CGGACACTGG CCAGTGTCAC
AAAAATCTAC TAGGAATAAA GTCTCCAACA ATAAGACGAA TGCCAACACT AGAGCCGGTG CAAACCACAA GCAACCATCA
CCAGTTCTGA GCAAAAAAAC TTGATTGCTA CCTTTTAGAA GATTGCTTTT TAATGAAGTA TCATGTGGTG TAAGAGTAAT
TATCAAGCCA CCCTATATAT ATGTAATTAA ATGTATAAAA CATAAAT

>Vigan.10G128500.01
ATGAAGGAAC CATCAAAGGC ATGGAGACCC TTCACTGCAA ATTGCTGCTC CACAGAGGAC CAAACCGTGT TCAAGAACTT
CAGCAGGTGC AAGCCTTCAC GTTCTGACTT GTCAAAGAAC ATTGCTCCTT TGCCATCGTT CAGGAGGCTC TCCTTCTCTG
ATCTCAGTCG TTCCTCGTCT GTGCGAATCA ATGAGGATCT TGCACAGTCT TTTGGGTCGG ATTTGTTTGA TTTTCAGCTG
AGTGAGCTGC GTGCCATAAC TCAGAATTTC AGCAGCAACT TCTTGCTGGG AGAAGGAGGG TTTGGAACTG TGCATAAGGG
CTACGTAGAT GATCATCTCA GGCTTGGTTT GAAGGCACAA CCTGTTGCTG TCAAGCTTCT TGACATTGAA GGCTTGCAAG
GACACCGTGA ATGGCTGGCA GAAGTGATTT TTCTTGGGCA GCTAAGACAC CCCAATTTGG TTAAGTTGAT TGGGTATTGT
TGTGAAGATG AAGAACGATT ACTTGTCTAT GAATTCATGC CACGAGGAAG TTTGGAGAAT CACCTCTTCA GAAGGCTAAC
ATCAATTCCA TGGGGGACAA GATTAAAAAT TGCAATAGGA GCTGCTAAAG GCCTTTCCTT CTTGCATGGA GCTGAGAAGC
CAGTCATTTA TAGAGACTTC AAGACTTCCA ATGTTTTGCT TGATTCAGAG TTCACAGCAA AATTGTCAGA TTTTGGACTT
GCTAAAATGG GGCCAGAGGG ATCCAACACA CATGTTTCAA CCAGAGTAAT GGGCACTTAT GGATATGCAG CACCAGAATA
CATCTCAACA GGGCATTTAA CAACCAAAAG TGATGTCTAC AGCTTTGGGG TAGTCCTGCT AGAACTGCTG ACAGGAAGAA
GAGCAACGGA CAAAACAAGA CCAAAGACTG AGCAAAACCT TGTGGATTGG TCAAAACCTT ACTTGAGTAG CAGTAGGAGG
TTGAGGTACA TTGTCGATCC AAGGCTTGCA GGCCAATATT CTGTGAAGGG TGCAAAGGAA ATTGCCCGTT TGGCATTGCA
ATGCATAAGT TTGAATCCTA AAGACAGACC AAGAATGCCA ATGATTGTTG AAACTCTTGA AGGCTTACAA CAGTACAAGG
ACATGGCTGT TACCAGCGGA CACTGGCCAG TGTCACAAAA ATCTACTAGG AATAAAGTCT CCAACAATAA GACGAATGCC
AACACTAGAG CCGGTGCAAA CCACAAGCAA CCATCACCAG TTCTGAGCAA AAAAACTTGA 

>Vigan.10G128500.01
MKEPSKAWRP FTANCCSTED QTVFKNFSRC KPSRSDLSKN IAPLPSFRRL SFSDLSRSSS VRINEDLAQS FGSDLFDFQL
SELRAITQNF SSNFLLGEGG FGTVHKGYVD DHLRLGLKAQ PVAVKLLDIE GLQGHREWLA EVIFLGQLRH PNLVKLIGYC
CEDEERLLVY EFMPRGSLEN HLFRRLTSIP WGTRLKIAIG AAKGLSFLHG AEKPVIYRDF KTSNVLLDSE FTAKLSDFGL
AKMGPEGSNT HVSTRVMGTY GYAAPEYIST GHLTTKSDVY SFGVVLLELL TGRRATDKTR PKTEQNLVDW SKPYLSSSRR
LRYIVDPRLA GQYSVKGAKE IARLALQCIS LNPKDRPRMP MIVETLEGLQ QYKDMAVTSG HWPVSQKSTR NKVSNNKTNA
NTRAGANHKQ PSPVLSKKT*