GBrowse Details

Vigan.10G087400.01

Basic Information:
Name: Vigan.10G087400.01
Multiple alignment
Variant Information
Position: Chr10:10034706..10038655 (+ strand)
Length: 3950
Functional Information:
Description: Similar to Uncharacterized protein. [I1J4Z0, Glycine max]
InterPro: Exostosin-like (IPR004263)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.46,4.13,9.81,7.61,13.25,19.43,9.90 ,10.23
Arabidopsis thaliana homolog: AT4G38040.1
Automatic updates:
Name: NM_001255565 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable glycosyltransferase At5g03795-like (LOC100777368), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001255565 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max exostosin family protein (LOC100777368), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:10034706..10034923 (+ strand)
Length: 218
Type: five_prime_UTR
Position: Chr10:10034924..10035043 (+ strand)
Length: 120
Type: CDS
Position: Chr10:10035125..10035478 (+ strand)
Length: 354
Type: CDS
Position: Chr10:10036026..10036312 (+ strand)
Length: 287
Type: CDS
Position: Chr10:10036860..10037092 (+ strand)
Length: 233
Type: CDS
Position: Chr10:10037830..10037987 (+ strand)
Length: 158
Type: CDS
Position: Chr10:10038162..10038263 (+ strand)
Length: 102
Type: CDS
Position: Chr10:10038264..10038655 (+ strand)
Length: 392
Type: three_prime_UTR

>Vigan.10G087400.01 class=Sequence position=Chr10:10034706..10038655 (+ strand)
AGAAAATTAG ATTAGCGAGA GCCAGCGAAG CATTTGCATA GGAAAATGGT AGGAGTGAGA AAGGAAGGTT CCAAGCCTCA
AATCGCAGAT TTCATCTCCT TCTGCTTCAT CTCTTACTCT CATCACATCA CTCGAATCTA ACCGCACAGA CTGATACATT
CATAGATCAA AATCAAAGGT AAGAAAACTT CGCAGCAGGG TTGAATCCAA TACTGATTAT GACGGGGAAG CAACAATCCT
CGTTCTTCTC TCTGCGAGGT TCTCTCCTGT TCCTCGCAAT CCTCACCCTT CTCTCCTTCA CCTACCTCGC TCTCAGATAC
TCCACCCCGC CACCCCAGGT ACCCATTTCT CCTGTTTCTC CCACCCCATT TTCCAATTTC ACATTTTTCA CCGCTTTCTT
GATTACCCTT TTGCTCTAGG TTTCCAAGTT CTCCGTCACG AAGCTCAACG ACGCGCGGGG AACCGGGAAA GAAGAGGAGT
GTGGAGGAGG AGGAGGAGGA GGAGAAGAAG AAGAAGAACT GTATTCGGAC ACGTTTCACT CTCCGCGTGT GTTCAAGCTG
AACTACGAGG AGATGGAGAA GAAGTTCAAG GTGTATATAT ACCCTGATGG GGATCCCAAC ACGTTCTACC AGACGCCGAG
GAAGCTCACT GGGAAGTACG CCAGCGAGGG CTATTTCTTC CAGAACATCA GAGAGAGTCA CTTCCGCACC GAAAACCCCG
ATGAGGCGCA CCTCTTCTTC ATCCCCATCT CGTGTCACAA GATGCGCGGC AAGGTATTTT CTTTCTCTTT CTGCATTCTC
TTTTGTTGAG ATCTGGGTAG AATGGTAGGA GAATGTTAGA TACTTCCATG CATTGCCGGG GTGTAGTAAA TGTGGATTGA
TAGTTAAAAG GGAAATTGTT GGAGATCTTG TATTGGTTAG TGATATGGTC AAAATGGTGA ATATAAGTGG GGGGACTTCT
TACTTCACGA GCTGGCTTGG GGTTAAGTCC AAAATCAAAA TTCAAATATG GTATCTAACC TATCTTATAG TTGTTTGTTT
GGCCACCTGT TATTAAAGTC TATACAATGG TTGGTGTTTG ACCTCTCAAA TGACTTGTTT TTAGACCATC TATAGATGTC
TAGTTTTACA AAGTCTAGAC TCGAGATATC TAGTCATGGG GGAGATGTGA TAAAGATCTC GCATGTAGGT TCAAACTAAA
AATTATAAAG AAAGTTATGA ATGCAGATGA AAGATTGATA AAATTATAAA TATCATCCCA TATTGGATGG TTAAGTGACT
GCTTCTAGGG GGAATTTGGT CTCATGTTTG TGTTATGCAG GGCACGTCTT ATGAGAACAT GACGATCATA GTACAAAATT
ATGTGGAGGG CTTGATATCC AAATATCCTT ATTGGAACAG AACCTTGGGT GCTGATCACT TCTTTGTCAC TTGTCATGAT
GTTGGTGTGA GGGCAACGGA AGGTCTTGAG TTGCTTGTGA AAAATTCCAT TCGAGCAGTC TGTTCCCCCA GCTATGATGT
TGGATTTATT CCTCACAAAG ATGTTGCTCT GCCTCAAGTG CTACAGCCTT TTGCTCTTCC TTCTGGGGGG AATGATGTAG
AAAACAGGTG ACGTTTTTCA AGTCATGTGT GGCTCCAATT TAGTTTCATT GCTTGCTGGG GAATTGGGGA ATATTAGGTT
TTGGGGATTG GATTTTCGGT TTGAATGAAT TATCGTCCAG CTTTTGGAGG GTTTGTTAAT CTTTTATGGT CAGAGTGATG
GAAGTTACTT GATATTTCTC ATAATGTTCA AAGACCTTTA TCAGACTCTG GCTCATGAAC CTCAAGTCTT TATTTATAAT
ATGCTGCAAT TGCTCTTTAG TTTCTGGTAT CCTGGGTAAA CACTATTTAT GCTGTGGATC TTAAAAACCT TCCGTGGAGT
ACACACTGCT TGGCAAGAGC TTAAGACAAG AAAAATGCCA GTAACCTCCA TGTTGCAACA AAATGCTATT CTGAGTTTCA
ATATTTTTTA TCCTGTTCAA GAGACCGGTT TTTATTTGTT TAATGTAAAT AGTACAAAAA ATGAATATCG AGTCTACATT
TCCAGCCACA GAATTAGTAA GGATGCTTAG CTAATTTCTT TCATAAGCTT AATTAATAAA TCTGTGGTTT GCAGGACTCA
ACTTGGATTT TGGGCTGGTC ATCGTAACTC TAAAATTAGA GTTATTCTTG CACGTGTGTG GGAAAATGAC ACAGAACTTG
ATATTTCAAA CAACAGAATT AGTAGGGCTA CTGGGCATCT AGTGTACCAG AAGAGATTTT ACAGGAGTAA ATTTTGTATA
TGTCCTGGTG GATCCCAGGT CAATAGTGCT CGAATAGCAG ACTCTATCCA TTATGGGTGC ATCCCTGGTA AGATAATCCC
TTCTGTTGAT TTTTTCCCTT TTGATTTTAT AGTTGTGTAT TCAGCTTCTT AGAATTGCAT ACCTGTAGGA CTGAAGGTAC
AAGTATATAA TAACCAAATA CCTATTGTCT AGTGGTTTTT ATCATTTTTC ATGGATGGTG AGAGTGGTTG CATATTTCTT
GTGTCTATTG AGAAACATTT GCAAACCCTA TCCTTGTCTA TACTGATTAT TCAATCTTTG GTTGCTTCTA TCACACCTAA
GATTGGATAG TAGAATTGAA ACTTTATTGT GGGATGATAA TTGAGTGTCC GATTTATGGG GGTTCGATAA TCAATTAACT
GTCTTTAACT ATATACAAAA ATAGTTTAAT TTGGAAAGGA TATTTAATAC GTGGAATAAT AGCTGAACCC TTTTATTGTT
GTGGACTGTT GGAGGTAGTG GAGGTTGTAA TACAACCATT GAATTGTGGA ATTGGGGCCC AGGGACCAAT TTTAGGATAT
GCTCTCTTGC TCCACCTGTC TAATCTTCTT GTTAAGGTCA AATTCAGTAG AAGCCATGTG TAAACAGATT ACACATACAC
TTCACCTTAG CTTGTTAAAA AGAATTAAAT AAGGATATTG TAAATGACAT TTGAGCTGTA ACTTGGTTTT GAATAAATTT
GTGTTCTGCT TTGATATTCT TGCATTTGGG ACAGGATTAT TTAGACTACT GTACTGACCT ATAGCTGCTT ATGTTGTTTT
GCAGTGATAT TGTCAAATTA CTATGACCTT CCTTTTAATG ATATTCTTGA CTGGAATAAA TTTGCTGTGG TACTCAAAGA
GAAAGATGTA TACCAGCTTA AACAAATCCT CAAAAATATA TCAGATGCCG AGTTTGTTAC ACTTCATTAT AATTTGGTAA
AGGTATAAAT CCTCTCATTA CTTTATATAA AATATATATA TTAGTAAAAG ATTTTAGTTT TGTGAACCTT TGCTTATAAT
TCAGAAAAAC CTTCGTTTGG TCGGTAAAAT TTTTCATTGT CAATTGAATT ATTGTTTTTA TATTGGAGCT CACATAAAGT
TGCTTCATGC TCTCAGGTTC AGAAACATTT CCAATGGAAT TCACCCCCAA TCACATTTGA TGCTTTCCAT ATGGTTATGT
ATGACCTCTG GTTACGCCAT CACACGATCA AATACTGATA TTTAGACTCA CTCTAAAACA CTCTTGTTTT GTATACAACT
TACAGTTTTA GCAACCGAGA GAGCACTGTA AATAGCCAAT TACAGTTTTG TATACAGCAG CTGGCTTATT CTATATTCTT
GCACCCACAA CATTTCGGTT AATTTGTTAT TTGTTTGCGG TAAGGCTTTG TTGGGTTGAA ACTAATACAT AGCCAAGCCA
CTAAGGCTGG TGCAATTGTT CAAGTTGTTC AAAATCCTAA CTAGAACATG GGTCGGCTTG GCTTTCAATT GTAACACCTG
ACTGACTCGT GGTAGTTATT TAACTGTATG CTTACATATG TTTGGATAAT ATTACCCTGG AATAAAGGCC ATCAGGTATT
AGTAGTCATG CACTATCATT TTGGTCATCT 

>Vigan.10G087400.01
AGAAAATTAG ATTAGCGAGA GCCAGCGAAG CATTTGCATA GGAAAATGGT AGGAGTGAGA AAGGAAGGTT CCAAGCCTCA
AATCGCAGAT TTCATCTCCT TCTGCTTCAT CTCTTACTCT CATCACATCA CTCGAATCTA ACCGCACAGA CTGATACATT
CATAGATCAA AATCAAAGGT AAGAAAACTT CGCAGCAGGG TTGAATCCAA TACTGATTAT GACGGGGAAG CAACAATCCT
CGTTCTTCTC TCTGCGAGGT TCTCTCCTGT TCCTCGCAAT CCTCACCCTT CTCTCCTTCA CCTACCTCGC TCTCAGATAC
TCCACCCCGC CACCCCAGGT TTCCAAGTTC TCCGTCACGA AGCTCAACGA CGCGCGGGGA ACCGGGAAAG AAGAGGAGTG
TGGAGGAGGA GGAGGAGGAG GAGAAGAAGA AGAAGAACTG TATTCGGACA CGTTTCACTC TCCGCGTGTG TTCAAGCTGA
ACTACGAGGA GATGGAGAAG AAGTTCAAGG TGTATATATA CCCTGATGGG GATCCCAACA CGTTCTACCA GACGCCGAGG
AAGCTCACTG GGAAGTACGC CAGCGAGGGC TATTTCTTCC AGAACATCAG AGAGAGTCAC TTCCGCACCG AAAACCCCGA
TGAGGCGCAC CTCTTCTTCA TCCCCATCTC GTGTCACAAG ATGCGCGGCA AGGGCACGTC TTATGAGAAC ATGACGATCA
TAGTACAAAA TTATGTGGAG GGCTTGATAT CCAAATATCC TTATTGGAAC AGAACCTTGG GTGCTGATCA CTTCTTTGTC
ACTTGTCATG ATGTTGGTGT GAGGGCAACG GAAGGTCTTG AGTTGCTTGT GAAAAATTCC ATTCGAGCAG TCTGTTCCCC
CAGCTATGAT GTTGGATTTA TTCCTCACAA AGATGTTGCT CTGCCTCAAG TGCTACAGCC TTTTGCTCTT CCTTCTGGGG
GGAATGATGT AGAAAACAGG ACTCAACTTG GATTTTGGGC TGGTCATCGT AACTCTAAAA TTAGAGTTAT TCTTGCACGT
GTGTGGGAAA ATGACACAGA ACTTGATATT TCAAACAACA GAATTAGTAG GGCTACTGGG CATCTAGTGT ACCAGAAGAG
ATTTTACAGG AGTAAATTTT GTATATGTCC TGGTGGATCC CAGGTCAATA GTGCTCGAAT AGCAGACTCT ATCCATTATG
GGTGCATCCC TGTGATATTG TCAAATTACT ATGACCTTCC TTTTAATGAT ATTCTTGACT GGAATAAATT TGCTGTGGTA
CTCAAAGAGA AAGATGTATA CCAGCTTAAA CAAATCCTCA AAAATATATC AGATGCCGAG TTTGTTACAC TTCATTATAA
TTTGGTAAAG GTTCAGAAAC ATTTCCAATG GAATTCACCC CCAATCACAT TTGATGCTTT CCATATGGTT ATGTATGACC
TCTGGTTACG CCATCACACG ATCAAATACT GATATTTAGA CTCACTCTAA AACACTCTTG TTTTGTATAC AACTTACAGT
TTTAGCAACC GAGAGAGCAC TGTAAATAGC CAATTACAGT TTTGTATACA GCAGCTGGCT TATTCTATAT TCTTGCACCC
ACAACATTTC GGTTAATTTG TTATTTGTTT GCGGTAAGGC TTTGTTGGGT TGAAACTAAT ACATAGCCAA GCCACTAAGG
CTGGTGCAAT TGTTCAAGTT GTTCAAAATC CTAACTAGAA CATGGGTCGG CTTGGCTTTC AATTGTAACA CCTGACTGAC
TCGTGGTAGT TATTTAACTG TATGCTTACA TATGTTTGGA TAATATTACC CTGGAATAAA GGCCATCAGG TATTAGTAGT
CATGCACTAT CATTTTGGTC ATCT

>Vigan.10G087400.01
ATGACGGGGA AGCAACAATC CTCGTTCTTC TCTCTGCGAG GTTCTCTCCT GTTCCTCGCA ATCCTCACCC TTCTCTCCTT
CACCTACCTC GCTCTCAGAT ACTCCACCCC GCCACCCCAG GTTTCCAAGT TCTCCGTCAC GAAGCTCAAC GACGCGCGGG
GAACCGGGAA AGAAGAGGAG TGTGGAGGAG GAGGAGGAGG AGGAGAAGAA GAAGAAGAAC TGTATTCGGA CACGTTTCAC
TCTCCGCGTG TGTTCAAGCT GAACTACGAG GAGATGGAGA AGAAGTTCAA GGTGTATATA TACCCTGATG GGGATCCCAA
CACGTTCTAC CAGACGCCGA GGAAGCTCAC TGGGAAGTAC GCCAGCGAGG GCTATTTCTT CCAGAACATC AGAGAGAGTC
ACTTCCGCAC CGAAAACCCC GATGAGGCGC ACCTCTTCTT CATCCCCATC TCGTGTCACA AGATGCGCGG CAAGGGCACG
TCTTATGAGA ACATGACGAT CATAGTACAA AATTATGTGG AGGGCTTGAT ATCCAAATAT CCTTATTGGA ACAGAACCTT
GGGTGCTGAT CACTTCTTTG TCACTTGTCA TGATGTTGGT GTGAGGGCAA CGGAAGGTCT TGAGTTGCTT GTGAAAAATT
CCATTCGAGC AGTCTGTTCC CCCAGCTATG ATGTTGGATT TATTCCTCAC AAAGATGTTG CTCTGCCTCA AGTGCTACAG
CCTTTTGCTC TTCCTTCTGG GGGGAATGAT GTAGAAAACA GGACTCAACT TGGATTTTGG GCTGGTCATC GTAACTCTAA
AATTAGAGTT ATTCTTGCAC GTGTGTGGGA AAATGACACA GAACTTGATA TTTCAAACAA CAGAATTAGT AGGGCTACTG
GGCATCTAGT GTACCAGAAG AGATTTTACA GGAGTAAATT TTGTATATGT CCTGGTGGAT CCCAGGTCAA TAGTGCTCGA
ATAGCAGACT CTATCCATTA TGGGTGCATC CCTGTGATAT TGTCAAATTA CTATGACCTT CCTTTTAATG ATATTCTTGA
CTGGAATAAA TTTGCTGTGG TACTCAAAGA GAAAGATGTA TACCAGCTTA AACAAATCCT CAAAAATATA TCAGATGCCG
AGTTTGTTAC ACTTCATTAT AATTTGGTAA AGGTTCAGAA ACATTTCCAA TGGAATTCAC CCCCAATCAC ATTTGATGCT
TTCCATATGG TTATGTATGA CCTCTGGTTA CGCCATCACA CGATCAAATA CTGA

>Vigan.10G087400.01
MTGKQQSSFF SLRGSLLFLA ILTLLSFTYL ALRYSTPPPQ VSKFSVTKLN DARGTGKEEE CGGGGGGGEE EEELYSDTFH
SPRVFKLNYE EMEKKFKVYI YPDGDPNTFY QTPRKLTGKY ASEGYFFQNI RESHFRTENP DEAHLFFIPI SCHKMRGKGT
SYENMTIIVQ NYVEGLISKY PYWNRTLGAD HFFVTCHDVG VRATEGLELL VKNSIRAVCS PSYDVGFIPH KDVALPQVLQ
PFALPSGGND VENRTQLGFW AGHRNSKIRV ILARVWENDT ELDISNNRIS RATGHLVYQK RFYRSKFCIC PGGSQVNSAR
IADSIHYGCI PVILSNYYDL PFNDILDWNK FAVVLKEKDV YQLKQILKNI SDAEFVTLHY NLVKVQKHFQ WNSPPITFDA
FHMVMYDLWL RHHTIKY*