GBrowse Details

Vigan.10G054300.01

Basic Information:
Name: Vigan.10G054300.01
Multiple alignment
Variant Information
Position: Chr10:5564965..5571101 (+ strand)
Length: 6137
Functional Information:
Description: Similar to Uncharacterized protein. [I1JEH1, Glycine max]
GO: Biological Process: carbohydrate metabolic process (GO:0005975)
Biological Process: pentose-phosphate shunt (GO:0006098)
Molecular Function: 6-phosphogluconolactonase activity (GO:0017057)
InterPro: 6-phosphogluconolactonase, DevB-type (IPR005900)
Glucosamine/galactosamine-6-phosphate isomerase (IPR006148)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:27.08,15.18,14.11,13.80,18.45,14.66, 21.22,14.21
Arabidopsis thaliana homolog: AT1G13700.1
Automatic updates:
Name: NM_001362701 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable 6-phosphogluconolactonase 2 (LOC100806593), mRNA.
PubMed ID: 28352959 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr10:5564965..5565705 (+ strand)
Length: 741
Type: five_prime_UTR
Position: Chr10:5565706..5565878 (+ strand)
Length: 173
Type: CDS
Position: Chr10:5565958..5566093 (+ strand)
Length: 136
Type: CDS
Position: Chr10:5570368..5570859 (+ strand)
Length: 492
Type: CDS
Position: Chr10:5570860..5571101 (+ strand)
Length: 242
Type: three_prime_UTR

>Vigan.10G054300.01 class=Sequence position=Chr10:5564965..5571101 (+ strand)
CTTCATTCGG CAGCTTCTTC TGCGAACCAT CTTCTCTCTA TTTTTATATT TTTCTTTGTA AGTGTTTTCT TTCATTATTT
TGTGTGAAAT GTGTGGATTT TGTGTGTGAT GCAGTTTCAG GTTATGTTAA ACTGCATGAG ACTATGATTG ACCATCATGC
TTTGTTCTTT TATTAGTTTC TGCAGCAGTA GAGGGTGTCA ATTTAACATG TTTTATGATC TGGGGCATGT GTTTCTTCTT
TTGTAGTTTT CTTTTTCTGC TAGAGTGCAC TTGTTTTGAG CCTTTTTCAT TTCTCGGTCT AGATCTCTGG AAATTTAGGT
TGTGGCGATG ATACCTTTTT GTTCAATTGT TTTCTTTTTT TGACAATTAG AGAATCCACT TGCAAATTGA ATTCATGCGG
GTTAGCCGTC GTAGCTTATA GATTATTTTT AGAAAATACT TTAGCTTTAT AATATGTATA GGCATATAAG TCTTGTAGTC
AAACAAAAAG TAAAAATTGA AGTAATCGCT TGTCTATATT CTTATTTTCT GTATCGCTTG TCCAGAAATT TGTTTTCTAG
ATATGAAGCT GGATCTTGAA CTACTTAGAA ATTTCCTTTG TGTTTTAGGT TTAGGAAAAC TAAATGTTAA AGCTGTTTGT
GTTTTGAGTT TCACTAACTT TATTATTTCT ACATGAGATG ATTTTGATGC TTTTTTTGTC TTTTGTGGTT ACAAAATAGA
GCTATTGGAC CCTCCGGAAC CATGGCTCTT TCTGATGGTC AGAAGAATAG AGGAGAATTG AGGATTCATG AGAGTTTGGA
CGAGCTAATG ACCGATTTGG CAGACTATGT TGCTGAGTTA TCAGAGGCAT CAGTTAAAGA GCGAGGAGTC TTTGCCATTG
CTTTATCTGG TGGTTCTCTC ATTGGCTTAA TGGGGTATCT GTATCTTATC TTTTTCATAT CTTTCTTTGC TTTTATGATT
TATTGTTGAT TTAAAACTTA AGTTTGGTTA CAGAAAACTC TGCGAAGCTC CGTATAACAA GACCGTGGAC TGGTCCAAGT
GGTATATTTT CTGGGCTGAT GAGCGTGTTG TGGCAAAAAA CCATGCTGAT AGCAATTATA AGCTTGCTAA AGATGGCCTT
TTGTCCAAGG TTGTGCCCCA TGTTTCTCAC TGCTTTATCC AGTTTTAAGT AACAAAATGG TTTACTCTCA TAACAGTTTA
AACTGTACCT TCTCCTGCTG ATTGCTTCTT AAAAAGGAAA CTCTAACAAA GTAAAGCAGT GATATCATCT AACAAGGAGA
GCTTTGGTTT CTTCTGGTCT TCTGGTCTTG ACAGTTTACT GAGAAAATTT AATAGCTGTT TTAATTTGAG TGCACAGATA
AAGCTTCGTA AAATTCTCTT GGTCACATGA AGCATTATAT TTTTGCTTCA AGGTGCCTAT TTTTGAATGT GTGTAGTCAA
TAGAGAGATG CCTCTTTTAG TAGTTTGGAT TTTATTTTAC TATTTATGAG ATTTAGCATT TGTTCTGACG TGGAAGTTGA
ACCTTAGTAA GGTAGTAGTT TACCCTTTAT AATTGACTGG ATTAACATGC ATACGTTGTA GTTTACTACA AATTTCTTCT
GCATTCTCTT TCTTTTTTGA AGGGTGGAAC AGAAGGCATA TACATATATC CACATAAGTT TAAATTCTCA AAAGGCTACT
ATCCAAATTG GTCTTTAGTT GAGGAATGGA TTGTGCTTGT TCTGAAAGAT TGTGATGGTG AATATTCCTA GTTTATGCAC
TAAGACAGTT TGACAGGGGC ATAAAGTCAT TCTTTTACAA ATCGTAGAGG AGTCTTTCCT GAATATTCTG TCTATATAGA
TGAATGTTAT GGTTTTTTAA ATTTCTTTTA CATGTTAAAT CCTTGATCAG AAGTTTATAT GATTACTCAT GCACCTTTTT
GTTTAAATGT TTGTACTAGT ATGTTCCACT GAGATAGTCC AAATTGAGGG GATGAATTCT CCAGTGATTT CTTGAGTCAT
GTCCATGGTT GGATCTGCCA TAGAAACTCC AGCAACAAAG TCAGTGACTG GAAAATATAT CTCAGAGTAG GACTACTTAT
TACTGACCAC ACCTGGAGAG GCCAGGAAGA AGTGCCCTGG TTTTACTCAG TCTCTTCTTG CACAAGTTAG GACTGAGACT
TATTTCTTGA AAAGATTAAT TATGGTAGCA CCTGGTGCTG ATAAACATAA GATAGCTGGC AAACCCAAAT GGGCCTCCAA
ATCGATCCAG GAGATCACTT ACACTACTAC CCTGTATTTA GTAATGGTGA GTTATGTTAT GGGTTGGGCA AACTGCCAAG
ATGAACTGAG ATTCACCAGT TAGTTCTCTT GAAAGATCAT TTTAGTTGAG ATATAATGTA GTTGATATGG TCTGGTGTGT
CCAAGGGACT GATATCATTG TAAAGGTTTC CAAAATTTCA TGGAATTTAG GTTGACTGTA GTTAACCTGG TTTGGAGTAT
TTGTGGCATT GTTACAACAA CAGGATGCCT GGTGGATACA TCAGCAAAAT GTTGAGGGTT CCAGCTAGTT GTGAGACTAG
ATCTTTGGAA AATCCTGATG GAAAAGAGGT AGGTCATTTG CTACACCAAT CTTTGTTCAT CGTGCGTTAG CTGTTTCAGA
AATATAAATT AATTGAGTCC CATATCTTGA GGGATCTGGT TTAAAATTTA CGGTGTGAGA CCCCAACTTG ATAATTTGAT
TTGGCAGTCA TTGGTTTTCC CTGTTGATTC TCTGGCATTC TTGCATATCC TCGGATTCAT TATTAAATTA TCAATTGCAA
ACCAGATCTG CACTTTACTT CAATTTTTTG AATTGTTTTG AACTTAATGG AAGATGCTCA AGAATCCAAA CTCGCCAATT
GCTCCAGGAG AATTCTTTTG GACAACCTCG GGTTGAAGCA AGATAGATGT GACGGGAGTT GTCCTATTCC TGTTGTTGAC
TGAAAAACTA AAATCTGTCT TGGTCTGTCT CGGGGACTGT GCTTGCTGAA AACATGTTAG TCTGAAATAA TAGGTTGGAA
ATCAGAAATT TTTACATGTT TAGCCCCAGA AGTTGAATCC TTGTTTGTGA GGGAAATGAG GAGTTTTAGC AATACCTGAT
GGATTTATTG GATCTATGTT GATAGAGGAC TAAAATGTTT GCTGAAAATC ATGATCAGAT ATCACAAAGG ATCTTCATGC
ATTTGAGTAA GAGCTACTGG TTGCATGTGG AAACTACATG AGTTATGAAG GTATTGACTG AGAGATGCAT ATTATCACTA
GAAAATAATA CTTCCAGTTA ATTAGTAGTC CTACGGTGGA CGCTTTCTCA TTAACTTTAT CTAAACTATC AGCTGAAATA
TTAAAGTTTC TCTTCATTAT TGCACCTATT GTTTAATTTT CCACTTTTGT GTCTTCAGTT TCATTACATA CCTTCAAGGT
ATAATACTTT CGTGTTTGAG CATTTTAACT GCTTGATGGC ATGTTGTGCG TGTTCCCAAC ATCTAATTTT CTAATTGCAA
CTGCTGTGTA ATGTGATTCA TTCGAGTCTG TGAAGCAAAA TCTTTCCCCT CCTGACATCT GCATCCTGCA GAGATTAAGT
ACCCCATTCT GTTTCATTCT CAATTTTGCT TTGAAATTAC TTCATTGATG GCTTTGAAGG ACTCATGATT TTCCGGAAAT
GGAAGCCAAT GACCTTGATA ATATTTTAAG ATGGATCCAT ATTTTGAAAG AGAGAGCTTT GGGTCCCTAA TACGTGCTCA
AAGTGAATCT CTGGATATGT TGCGAGGCTC AGGAGAAGAT TCTGAATCAA ATTCGGCACA TTTTCTTATC GAGTCAGTTT
ACATTCATGT AGCCAATGTG TTAAAAAAGT TCATTGGCTT AAGTGGAGTT GCAGTTCATA AAACTTGCTA ATGCCAAATA
TGTGAAAGGA AATCTCTCGT ATACTACCTC AGAAACCATA ACTGGTGATA CTTTCAGAAT TTATTGATTC TCCAGCAGAC
AATATCATCA GTAAACACAA TTTCTTCAGC ACGAGCTTTT GGATGCAAAT GAACTTTTTT TTTTTTATAT ATTGACAATA
TGAGAAGTAG AAGCAGAAAG TTCTAAAGAG TTATCACTTG ATTTCGAAAC ATTTTACAGT AACACTCATT TAGTATTGGG
CTTTTTATAA CCTATCCTCC AAGGTGGAGG AGACCAAATA GCTCTTTCTT GGATGATCGT TTACGTTTCA TGTACTGGGT
TATTAAACTA TGCGCGTTAC CAAATACCAA TGACAATGGT GGGGATTTTT ACAGTCCTAA GAGGATTGAT CATATCATTA
TAAGAAAGAG GAATACAAGA AACACATAAG AAATCTTTCA AATTGGAAGA ATATTGCACC TGAAAGTTTG TTATTTTCTT
TCTACAAAGA GGTAGTACAT TGCCTGTCGG TTGCATGTGC CTCCGACTTT TCTATTTTCC TTCCATGTAT GGGAAGTTAG
TTGTCAGGTT TGTTTTTCAG GATAAAGGTC TCAAATGCTG AGGACCAACA GTTATTCTTG AACGTTATGG CATTATTATA
CTTAGAATGA GTTATTATGC TTTAGTAATG ATTTCTTAAT GACAGCAATA TGTAAGGGTG AATTTGAAAT AAATCCTGTA
CAGCAAGTGT ATGGTGCTAT CTGCAGGATT GCCATGCAAA AGGGCATCTT GATCTACATG TCTATTTTCC ATGATCCATG
GGTATTTTCT GGGAGTTACA TGGATATTAA AGAATGATGA GGAATGTAGG AATGAATTCT TGAAGTTGGA ATATTTCTAT
ATTTCCATAT TCTGGGATCT ACAACATTGA ATATTCAGGC GTTAGGTTTA TGTCTTCACT ATTGTCCTTC CGTGCATTTA
ATTTCTTAAA TGTTTTCCTG TGTTGTAGTT GCTATAATTC CAAGGTGTTA ATTAAGAAAA TATAAATGTT CCTGAATTGC
ATTTTCTTCT TCTGTGAAAC ACGTGACAAG CTTGTTGATA AATTCCTTGA CAGGAAAATA TATAATTCAG GATTTGCTTG
CTTTCTTTCT ATTTAAATAT TGAGTTCAAC AAATGCAGCA TGTGAACCTA TGATATAGGA GTCCATATTC TCTGCGGGTT
TTTTGGTATT GTTTCTCTGC GGGTTTTTTG GTATTGTTTC TCTGCTGAGT TTTCAAAATA CACCGATGTA TTATAAAAGG
TTTTAATATA TTTTAAAACA TCAATACTTT GAAGCCACGG CAGAGAGACA GCACTAAAAC TCAGTAGAGA ATCCGATATA
GATCTTTAGC TTAATGTGAA AAAAATCTCC TTTTCTGTCT CTGTATTCTA TCTCTTTAAT ATTCCATGAG ATTACTTGAC
ATCCCTTTAT ATTTCTCTGC TGATATAATT ATTACATTAG CAGGTTCCTA TTGTCCCCAG TCATGTGCAT TCTATTAACG
ATTCTGTGTC AGCAGAAGAA GCTGCTGAAG ATTATGAGTT TGTGATTCGA CAGTTCGTGA AAACACGTGT TGTCAGTGTC
TCAGAGATTA GTGACTGTCC AAAGTTTGAT CTCATTCTGC TGGGATTGGG TCCAGACGGC CACATTGCCT CATTGTTTCC
CAACCACTCA GCACTGAATG AAAGGGAAGA ATGGGTAACT TTCATTACTG ACTCTCCCAA ACCCCCACCT GAGAGAATCA
CATTCACCAT GCCTGTCATC AATTCTGCAT CAAATGTTGC AGTAGTTGTC ACTGGTGACA GCAAAGCAGA ATCTGTGCAC
TTGGCAATAG ATGATCTTGG ACCTGACTGC CCATTAATAC CAGCCAGAAT GGTCCAACCA GCTATGGGGA AGTTGGCGTG
GTTTTTGGAT AAACTGGCTG CCTCAAAACT TGAAGAATCC AATTTAAACA AGTAGGAATT GTTGTAAGTT TGTATGTAGT
GTTAAGGGAT TTGGCAGTTG TTGATTATCA TCAGATCCTG TCTCTGCCTA TCTCTCTTCT CTTGGATAGA AATCTTTGCT
TCTTTTTTTT TCTCCTTTTC TTGCTTTCTC TTGGGAGGTT TTTGAGGGAA GTGTGGTATA GTTTTTGTAA GCGGCCAATA
AAAGTGGTGG AGAGCATCAT TCCATGTTCC AACACCCTTC TTTCCTTCTG ATTCCTC

>Vigan.10G054300.01
CTTCATTCGG CAGCTTCTTC TGCGAACCAT CTTCTCTCTA TTTTTATATT TTTCTTTGTA AGTGTTTTCT TTCATTATTT
TGTGTGAAAT GTGTGGATTT TGTGTGTGAT GCAGTTTCAG GTTATGTTAA ACTGCATGAG ACTATGATTG ACCATCATGC
TTTGTTCTTT TATTAGTTTC TGCAGCAGTA GAGGGTGTCA ATTTAACATG TTTTATGATC TGGGGCATGT GTTTCTTCTT
TTGTAGTTTT CTTTTTCTGC TAGAGTGCAC TTGTTTTGAG CCTTTTTCAT TTCTCGGTCT AGATCTCTGG AAATTTAGGT
TGTGGCGATG ATACCTTTTT GTTCAATTGT TTTCTTTTTT TGACAATTAG AGAATCCACT TGCAAATTGA ATTCATGCGG
GTTAGCCGTC GTAGCTTATA GATTATTTTT AGAAAATACT TTAGCTTTAT AATATGTATA GGCATATAAG TCTTGTAGTC
AAACAAAAAG TAAAAATTGA AGTAATCGCT TGTCTATATT CTTATTTTCT GTATCGCTTG TCCAGAAATT TGTTTTCTAG
ATATGAAGCT GGATCTTGAA CTACTTAGAA ATTTCCTTTG TGTTTTAGGT TTAGGAAAAC TAAATGTTAA AGCTGTTTGT
GTTTTGAGTT TCACTAACTT TATTATTTCT ACATGAGATG ATTTTGATGC TTTTTTTGTC TTTTGTGGTT ACAAAATAGA
GCTATTGGAC CCTCCGGAAC CATGGCTCTT TCTGATGGTC AGAAGAATAG AGGAGAATTG AGGATTCATG AGAGTTTGGA
CGAGCTAATG ACCGATTTGG CAGACTATGT TGCTGAGTTA TCAGAGGCAT CAGTTAAAGA GCGAGGAGTC TTTGCCATTG
CTTTATCTGG TGGTTCTCTC ATTGGCTTAA TGGGAAAACT CTGCGAAGCT CCGTATAACA AGACCGTGGA CTGGTCCAAG
TGGTATATTT TCTGGGCTGA TGAGCGTGTT GTGGCAAAAA ACCATGCTGA TAGCAATTAT AAGCTTGCTA AAGATGGCCT
TTTGTCCAAG GTTCCTATTG TCCCCAGTCA TGTGCATTCT ATTAACGATT CTGTGTCAGC AGAAGAAGCT GCTGAAGATT
ATGAGTTTGT GATTCGACAG TTCGTGAAAA CACGTGTTGT CAGTGTCTCA GAGATTAGTG ACTGTCCAAA GTTTGATCTC
ATTCTGCTGG GATTGGGTCC AGACGGCCAC ATTGCCTCAT TGTTTCCCAA CCACTCAGCA CTGAATGAAA GGGAAGAATG
GGTAACTTTC ATTACTGACT CTCCCAAACC CCCACCTGAG AGAATCACAT TCACCATGCC TGTCATCAAT TCTGCATCAA
ATGTTGCAGT AGTTGTCACT GGTGACAGCA AAGCAGAATC TGTGCACTTG GCAATAGATG ATCTTGGACC TGACTGCCCA
TTAATACCAG CCAGAATGGT CCAACCAGCT ATGGGGAAGT TGGCGTGGTT TTTGGATAAA CTGGCTGCCT CAAAACTTGA
AGAATCCAAT TTAAACAAGT AGGAATTGTT GTAAGTTTGT ATGTAGTGTT AAGGGATTTG GCAGTTGTTG ATTATCATCA
GATCCTGTCT CTGCCTATCT CTCTTCTCTT GGATAGAAAT CTTTGCTTCT TTTTTTTTCT CCTTTTCTTG CTTTCTCTTG
GGAGGTTTTT GAGGGAAGTG TGGTATAGTT TTTGTAAGCG GCCAATAAAA GTGGTGGAGA GCATCATTCC ATGTTCCAAC
ACCCTTCTTT CCTTCTGATT CCTC

>Vigan.10G054300.01
ATGGCTCTTT CTGATGGTCA GAAGAATAGA GGAGAATTGA GGATTCATGA GAGTTTGGAC GAGCTAATGA CCGATTTGGC
AGACTATGTT GCTGAGTTAT CAGAGGCATC AGTTAAAGAG CGAGGAGTCT TTGCCATTGC TTTATCTGGT GGTTCTCTCA
TTGGCTTAAT GGGAAAACTC TGCGAAGCTC CGTATAACAA GACCGTGGAC TGGTCCAAGT GGTATATTTT CTGGGCTGAT
GAGCGTGTTG TGGCAAAAAA CCATGCTGAT AGCAATTATA AGCTTGCTAA AGATGGCCTT TTGTCCAAGG TTCCTATTGT
CCCCAGTCAT GTGCATTCTA TTAACGATTC TGTGTCAGCA GAAGAAGCTG CTGAAGATTA TGAGTTTGTG ATTCGACAGT
TCGTGAAAAC ACGTGTTGTC AGTGTCTCAG AGATTAGTGA CTGTCCAAAG TTTGATCTCA TTCTGCTGGG ATTGGGTCCA
GACGGCCACA TTGCCTCATT GTTTCCCAAC CACTCAGCAC TGAATGAAAG GGAAGAATGG GTAACTTTCA TTACTGACTC
TCCCAAACCC CCACCTGAGA GAATCACATT CACCATGCCT GTCATCAATT CTGCATCAAA TGTTGCAGTA GTTGTCACTG
GTGACAGCAA AGCAGAATCT GTGCACTTGG CAATAGATGA TCTTGGACCT GACTGCCCAT TAATACCAGC CAGAATGGTC
CAACCAGCTA TGGGGAAGTT GGCGTGGTTT TTGGATAAAC TGGCTGCCTC AAAACTTGAA GAATCCAATT TAAACAAGTA
G

>Vigan.10G054300.01
MALSDGQKNR GELRIHESLD ELMTDLADYV AELSEASVKE RGVFAIALSG GSLIGLMGKL CEAPYNKTVD WSKWYIFWAD
ERVVAKNHAD SNYKLAKDGL LSKVPIVPSH VHSINDSVSA EEAAEDYEFV IRQFVKTRVV SVSEISDCPK FDLILLGLGP
DGHIASLFPN HSALNEREEW VTFITDSPKP PPERITFTMP VINSASNVAV VVTGDSKAES VHLAIDDLGP DCPLIPARMV
QPAMGKLAWF LDKLAASKLE ESNLNK*