GBrowse Details

Vigan.09G108900.01

Basic Information:
Name: Vigan.09G108900.01
Multiple alignment
Variant Information
Position: Chr09:16508411..16511324 (+ strand)
Length: 2914
Functional Information:
Description: Similar to Uncharacterized protein. [I1J7M8, Glycine max]
InterPro: WEB family (IPR008545)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.09,1.11,8.11,3.72,6.31,9.09,4.42,8.24
Automatic updates:
Name: BT099286 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-16N6 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:16508411..16508678 (+ strand)
Length: 268
Type: five_prime_UTR
Position: Chr09:16508679..16508846 (+ strand)
Length: 168
Type: CDS
Position: Chr09:16509508..16511004 (+ strand)
Length: 1497
Type: CDS
Position: Chr09:16511005..16511324 (+ strand)
Length: 320
Type: three_prime_UTR

>Vigan.09G108900.01 class=Sequence position=Chr09:16508411..16511324 (+ strand)
ATCGTTTGTT ACCGTTGACA GACAAGAGTC TGCGCTTGAG GACTGTGGTG GGCCCCGGTC CCCCCCAGTT TCGAAAATCA
AGGCAAAGAC TTCGGTATAG CTCATGGCAA AAAAACTAAG AACGACACCA CGTTTGTTTG TGTTTACTAT TTAGTTACCA
TGTTTACTTC CACAATCGCC AAAACACCAA CCCTTCCTTG TCGTTTTATT GTTTCAATTA TTGTTATTAT TACTTTTGTT
GTTTATTCAA CTTTTTCCGG TGTTTCACAT GGAAGTTTCC GACACGCCGG CGAACCGGTC CGAATCGGGT TTCAGGGCGG
AGATCGATAC ATCGGCGCCG TTCGAATCCG TGAGGGAAGC CGTCTCGCGG TTCGGCGGCG TTGGGTATTG GAAACCCATT
ATCAATGGTC TTGGCAATAA GCATTTCGAG CCTGAGGTAA CAACCCATCA GCCTCTTTTC GCTTTGAAGT TGTGATTCGT
GTGGTAACGG CATTGCACAA AGGAAAAGCT TCGACCTTTC TGATTTTGAA CATTTAGAAG AAAATGGTTC TGTGTTGTTT
TTGCTTCTGC CAACTCTATT GTGTATGGTG TTGTGATAAG AAATGGGGAT TTGTTAGTTT TACTGTTGTT GTTTTGTTAA
TTAATTGAGG TAGTAGTGTT TTGTCACGCT GCAGTTCAAG TTTTTTTCTT TTTACTTGTT TGTGGTGTTT GTTCTTCTGA
GTAGTACTTT TGTTTGGATC TGAAGGCAGT GATCTAAAGT AAAATATTAT AAATTGTGAA TCTTCACAAA ACGTGGAAAG
CAGATGTTAT TAAAGTTCAA ATCATTTCCA TGTTTGTTTT CGTTTGTTTG ATTATTTATT TGTTTACGGG TAGTGTGCTA
GCTGCTAAGA ACCCTTCGCC TGACAATGAA GGTCATGTAT ATGATATCTT AGCTGGATTA TGTTTTTTCC AGTGTAATAT
TTTCGTGGCT TTTATCTGTT TAGAAAAGGA CAACTTAAAT GCAGTTTTTT TTAATGTTTT TTTATGATGT TTTCAAGTTA
TATTTTGGCA TTTGTATTGA GTTAATTTCA CAATTAAAGT TTCTCTCTTC TTTTTAGCTG CATCACCCAG AAGAGCTTGA
CCCTGGAAAA CTGGAGGAGC AAGCTGCTGT ATTGGAGAAA GAGCTGATCC TGAAAGAAAG GGAAACTCTA GATGTCTTGA
AAGAGTTGGA AAGTACCAAA AGGCTTGTGG AGAATTTGAA ATCAAAGTTG CAGAAAGAAG AATCTGAAGC GAAATTGAAT
TTCCAAACGA GTGTGTGCAA TTATATGTGT ACTGTTAAAA AGGATGAGAA AGAAGATAAG GAAAACCAAG TGAGTAATGT
TGTTCAGGAT TTGAATGAAG GTTGTGTCCC CTGTCATTCA TCAGCCCCAG GTTTAATATT AAAGGAATTG GAGCAAGCAA
AACTGAATCT GAACAGAACC ACAAGTGATA TTGCTGATGT TCGCGCTTCT GTTGAATCAC TCAATAAGAA GTTAGAGAAG
GAAAGATTAT CTCTTGAGAA GACACGGGAG AGGTTAACTC AGAATTCTTC AAAGATATGC TGTCTTGAGG AAGAGCTAAA
CCAGACAAAA CTAAAACTGC TCGTGGCAAA AGATACTGGT TTGGATAACC CTTCGGATAT TCCAAAAGAG CTCCATCGGC
TGAGTTCTGA GGCAGAGAAT TTCAAGAGAA TGGGAGAAGC TGCTAAATCA GAAGTCTCGA AAGCAATGTC TGAGATTGAA
CAGACAAAAG CTATGATAAA AACTGCTGAA ATCAGGCTGG TTGCTGCTCG AAAAATAAAG GAAGCTGCTA GAGCAGCAGA
AGCAGCTGCC CTTGCAGAGA TAAAAGCTTT ATCACATAAT GATAATTCAC CTGGAGAGTG CGTGCAGAAG CATGATGGAA
TTACCCTTTC CTTTGAAGAG TATAATGCAC TGACCTGCAA GGCGCGGGAG GCCGAGGAAC ATTCTAAGAA GAGAGTTGTA
GATGCTATGC TTCTAGTAGA TGAAGCAAAT GTATCAAAAA TGGACATTTT GAAGAAGGTA GAGGAAGCCA CAGAAGAAGT
TAAAACCAGC AAGAAGGCCC TCGAGGAAGC TCTAGAAAGG GTAGAGGCTG CAAATCTAGG AAAGTTAGCA GTTGAAGAGG
CGTTAAGGAA GTGGCGGTCG GACAGTCACA GACGGCGATC CTCCATACAT AACTCCACCA AGTTTAAAAA TGCTTACCCT
TCTCACTATA GAAAGGAATC TCGGTTACTC GACGTGAACG GGTTGAATCT GGTAAATGAT GAGGCCAAGC CAGTTCTTAA
GCCAACACTG TCTATAGGAG AAATATTGAG TAGAAAGTTG ATGATGCCAG AAGAGTATGA AGCTGGAGAG AGAGAGTCAG
TTAAAGGGAA GGTTTCTCTT GGTCAGATGC TAGGCAGACA AAATGCAGAT GCATCATCCT TTGACAGGCA AGCTGAGAAG
GAAAATGGTC AGAAGCAGTT TTCTGCAAAG AGAAAGAAAT TTGGATTTGG TAGATTCTCT CTTCTTTTGA CAAAGCAGCA
AAAGAAGAAG AAGCCAACCC TGAACTTGAG GTGATGATGG CTTTCTTGAT CATCTTGTGC TGAAAAATTC ATGTTTGCAT
CTTATCAATC AATGTATTGT GCCTGCTTCA CTAGATTATT GTCTGTTGCA TTGTTTTCCC TTTGCTTGTA CATTATAACT
AAAGTTTGTC CATCAATTGT GATGCCACTT GTAGAGATGA TTTATGTCAA TTTGACTCTT GTAAGCTGAT CTTATATTTG
TGATATGCCT GAGGTTGTTC TGTTTTTTTC TCCCTTTTAT GTTGACATAT TAGTTAAAGG ATATTTCGAG GGAATTCATT
GGAGAAAAAT AACACTAATA AGATCTTATT CAAC

>Vigan.09G108900.01
ATCGTTTGTT ACCGTTGACA GACAAGAGTC TGCGCTTGAG GACTGTGGTG GGCCCCGGTC CCCCCCAGTT TCGAAAATCA
AGGCAAAGAC TTCGGTATAG CTCATGGCAA AAAAACTAAG AACGACACCA CGTTTGTTTG TGTTTACTAT TTAGTTACCA
TGTTTACTTC CACAATCGCC AAAACACCAA CCCTTCCTTG TCGTTTTATT GTTTCAATTA TTGTTATTAT TACTTTTGTT
GTTTATTCAA CTTTTTCCGG TGTTTCACAT GGAAGTTTCC GACACGCCGG CGAACCGGTC CGAATCGGGT TTCAGGGCGG
AGATCGATAC ATCGGCGCCG TTCGAATCCG TGAGGGAAGC CGTCTCGCGG TTCGGCGGCG TTGGGTATTG GAAACCCATT
ATCAATGGTC TTGGCAATAA GCATTTCGAG CCTGAGCTGC ATCACCCAGA AGAGCTTGAC CCTGGAAAAC TGGAGGAGCA
AGCTGCTGTA TTGGAGAAAG AGCTGATCCT GAAAGAAAGG GAAACTCTAG ATGTCTTGAA AGAGTTGGAA AGTACCAAAA
GGCTTGTGGA GAATTTGAAA TCAAAGTTGC AGAAAGAAGA ATCTGAAGCG AAATTGAATT TCCAAACGAG TGTGTGCAAT
TATATGTGTA CTGTTAAAAA GGATGAGAAA GAAGATAAGG AAAACCAAGT GAGTAATGTT GTTCAGGATT TGAATGAAGG
TTGTGTCCCC TGTCATTCAT CAGCCCCAGG TTTAATATTA AAGGAATTGG AGCAAGCAAA ACTGAATCTG AACAGAACCA
CAAGTGATAT TGCTGATGTT CGCGCTTCTG TTGAATCACT CAATAAGAAG TTAGAGAAGG AAAGATTATC TCTTGAGAAG
ACACGGGAGA GGTTAACTCA GAATTCTTCA AAGATATGCT GTCTTGAGGA AGAGCTAAAC CAGACAAAAC TAAAACTGCT
CGTGGCAAAA GATACTGGTT TGGATAACCC TTCGGATATT CCAAAAGAGC TCCATCGGCT GAGTTCTGAG GCAGAGAATT
TCAAGAGAAT GGGAGAAGCT GCTAAATCAG AAGTCTCGAA AGCAATGTCT GAGATTGAAC AGACAAAAGC TATGATAAAA
ACTGCTGAAA TCAGGCTGGT TGCTGCTCGA AAAATAAAGG AAGCTGCTAG AGCAGCAGAA GCAGCTGCCC TTGCAGAGAT
AAAAGCTTTA TCACATAATG ATAATTCACC TGGAGAGTGC GTGCAGAAGC ATGATGGAAT TACCCTTTCC TTTGAAGAGT
ATAATGCACT GACCTGCAAG GCGCGGGAGG CCGAGGAACA TTCTAAGAAG AGAGTTGTAG ATGCTATGCT TCTAGTAGAT
GAAGCAAATG TATCAAAAAT GGACATTTTG AAGAAGGTAG AGGAAGCCAC AGAAGAAGTT AAAACCAGCA AGAAGGCCCT
CGAGGAAGCT CTAGAAAGGG TAGAGGCTGC AAATCTAGGA AAGTTAGCAG TTGAAGAGGC GTTAAGGAAG TGGCGGTCGG
ACAGTCACAG ACGGCGATCC TCCATACATA ACTCCACCAA GTTTAAAAAT GCTTACCCTT CTCACTATAG AAAGGAATCT
CGGTTACTCG ACGTGAACGG GTTGAATCTG GTAAATGATG AGGCCAAGCC AGTTCTTAAG CCAACACTGT CTATAGGAGA
AATATTGAGT AGAAAGTTGA TGATGCCAGA AGAGTATGAA GCTGGAGAGA GAGAGTCAGT TAAAGGGAAG GTTTCTCTTG
GTCAGATGCT AGGCAGACAA AATGCAGATG CATCATCCTT TGACAGGCAA GCTGAGAAGG AAAATGGTCA GAAGCAGTTT
TCTGCAAAGA GAAAGAAATT TGGATTTGGT AGATTCTCTC TTCTTTTGAC AAAGCAGCAA AAGAAGAAGA AGCCAACCCT
GAACTTGAGG TGATGATGGC TTTCTTGATC ATCTTGTGCT GAAAAATTCA TGTTTGCATC TTATCAATCA ATGTATTGTG
CCTGCTTCAC TAGATTATTG TCTGTTGCAT TGTTTTCCCT TTGCTTGTAC ATTATAACTA AAGTTTGTCC ATCAATTGTG
ATGCCACTTG TAGAGATGAT TTATGTCAAT TTGACTCTTG TAAGCTGATC TTATATTTGT GATATGCCTG AGGTTGTTCT
GTTTTTTTCT CCCTTTTATG TTGACATATT AGTTAAAGGA TATTTCGAGG GAATTCATTG GAGAAAAATA ACACTAATAA
GATCTTATTC AAC

>Vigan.09G108900.01
ATGGAAGTTT CCGACACGCC GGCGAACCGG TCCGAATCGG GTTTCAGGGC GGAGATCGAT ACATCGGCGC CGTTCGAATC
CGTGAGGGAA GCCGTCTCGC GGTTCGGCGG CGTTGGGTAT TGGAAACCCA TTATCAATGG TCTTGGCAAT AAGCATTTCG
AGCCTGAGCT GCATCACCCA GAAGAGCTTG ACCCTGGAAA ACTGGAGGAG CAAGCTGCTG TATTGGAGAA AGAGCTGATC
CTGAAAGAAA GGGAAACTCT AGATGTCTTG AAAGAGTTGG AAAGTACCAA AAGGCTTGTG GAGAATTTGA AATCAAAGTT
GCAGAAAGAA GAATCTGAAG CGAAATTGAA TTTCCAAACG AGTGTGTGCA ATTATATGTG TACTGTTAAA AAGGATGAGA
AAGAAGATAA GGAAAACCAA GTGAGTAATG TTGTTCAGGA TTTGAATGAA GGTTGTGTCC CCTGTCATTC ATCAGCCCCA
GGTTTAATAT TAAAGGAATT GGAGCAAGCA AAACTGAATC TGAACAGAAC CACAAGTGAT ATTGCTGATG TTCGCGCTTC
TGTTGAATCA CTCAATAAGA AGTTAGAGAA GGAAAGATTA TCTCTTGAGA AGACACGGGA GAGGTTAACT CAGAATTCTT
CAAAGATATG CTGTCTTGAG GAAGAGCTAA ACCAGACAAA ACTAAAACTG CTCGTGGCAA AAGATACTGG TTTGGATAAC
CCTTCGGATA TTCCAAAAGA GCTCCATCGG CTGAGTTCTG AGGCAGAGAA TTTCAAGAGA ATGGGAGAAG CTGCTAAATC
AGAAGTCTCG AAAGCAATGT CTGAGATTGA ACAGACAAAA GCTATGATAA AAACTGCTGA AATCAGGCTG GTTGCTGCTC
GAAAAATAAA GGAAGCTGCT AGAGCAGCAG AAGCAGCTGC CCTTGCAGAG ATAAAAGCTT TATCACATAA TGATAATTCA
CCTGGAGAGT GCGTGCAGAA GCATGATGGA ATTACCCTTT CCTTTGAAGA GTATAATGCA CTGACCTGCA AGGCGCGGGA
GGCCGAGGAA CATTCTAAGA AGAGAGTTGT AGATGCTATG CTTCTAGTAG ATGAAGCAAA TGTATCAAAA ATGGACATTT
TGAAGAAGGT AGAGGAAGCC ACAGAAGAAG TTAAAACCAG CAAGAAGGCC CTCGAGGAAG CTCTAGAAAG GGTAGAGGCT
GCAAATCTAG GAAAGTTAGC AGTTGAAGAG GCGTTAAGGA AGTGGCGGTC GGACAGTCAC AGACGGCGAT CCTCCATACA
TAACTCCACC AAGTTTAAAA ATGCTTACCC TTCTCACTAT AGAAAGGAAT CTCGGTTACT CGACGTGAAC GGGTTGAATC
TGGTAAATGA TGAGGCCAAG CCAGTTCTTA AGCCAACACT GTCTATAGGA GAAATATTGA GTAGAAAGTT GATGATGCCA
GAAGAGTATG AAGCTGGAGA GAGAGAGTCA GTTAAAGGGA AGGTTTCTCT TGGTCAGATG CTAGGCAGAC AAAATGCAGA
TGCATCATCC TTTGACAGGC AAGCTGAGAA GGAAAATGGT CAGAAGCAGT TTTCTGCAAA GAGAAAGAAA TTTGGATTTG
GTAGATTCTC TCTTCTTTTG ACAAAGCAGC AAAAGAAGAA GAAGCCAACC CTGAACTTGA GGTGA

>Vigan.09G108900.01
MEVSDTPANR SESGFRAEID TSAPFESVRE AVSRFGGVGY WKPIINGLGN KHFEPELHHP EELDPGKLEE QAAVLEKELI
LKERETLDVL KELESTKRLV ENLKSKLQKE ESEAKLNFQT SVCNYMCTVK KDEKEDKENQ VSNVVQDLNE GCVPCHSSAP
GLILKELEQA KLNLNRTTSD IADVRASVES LNKKLEKERL SLEKTRERLT QNSSKICCLE EELNQTKLKL LVAKDTGLDN
PSDIPKELHR LSSEAENFKR MGEAAKSEVS KAMSEIEQTK AMIKTAEIRL VAARKIKEAA RAAEAAALAE IKALSHNDNS
PGECVQKHDG ITLSFEEYNA LTCKAREAEE HSKKRVVDAM LLVDEANVSK MDILKKVEEA TEEVKTSKKA LEEALERVEA
ANLGKLAVEE ALRKWRSDSH RRRSSIHNST KFKNAYPSHY RKESRLLDVN GLNLVNDEAK PVLKPTLSIG EILSRKLMMP
EEYEAGERES VKGKVSLGQM LGRQNADASS FDRQAEKENG QKQFSAKRKK FGFGRFSLLL TKQQKKKKPT LNLR*