GBrowse Details

Vigan.09G105500.01

Basic Information:
Name: Vigan.09G105500.01
Multiple alignment
Variant Information
Position: Chr09:15777825..15779492 (+ strand)
Length: 1668
Functional Information:
Description: Similar to uncharacterized protein. [D7SR22, Vitis vinifera]
GO: Molecular Function: protein dimerization activity (GO:0046983)
InterPro: Myc-type, basic helix-loop-helix (bHLH) domain (IPR011598)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.55,0.07,4.62,1.05,93.91,8.86,2.31, 6.83
Structure :
Position: Chr09:15777825..15777905 (+ strand)
Length: 81
Type: five_prime_UTR
Position: Chr09:15777906..15777977 (+ strand)
Length: 72
Type: CDS
Position: Chr09:15778103..15778228 (+ strand)
Length: 126
Type: CDS
Position: Chr09:15778408..15778578 (+ strand)
Length: 171
Type: CDS
Position: Chr09:15779070..15779144 (+ strand)
Length: 75
Type: CDS
Position: Chr09:15779145..15779492 (+ strand)
Length: 348
Type: three_prime_UTR

>Vigan.09G105500.01 class=Sequence position=Chr09:15777825..15779492 (+ strand)
CAGCCCCTAA GCCTCAGATG GGAAAGAAAA GGCATCAAGA AACCAAAACC CAAAATCAAT CAGAAGAAAG TTGGAAGAAT
CATGGATTCT AGGAGGCGTA GAAATATGCA ACGCAAGTTG CAACAACTTC GATCGGTCAC AAACTCCAGT GCTGTAATTC
ATTCGCTCTT CACAATGATT ATAATATATA TATGATGCAT GTTAACTTTG GCTTGCTACC TTCAAAGCTT GAATCAAGAA
CCTCATTAGT TTCTACTTGT TTTTGCTTAA TCTTGCAGGT TAACAAAGCC TCAATTATTG TGGATGCCAC AAGATACATA
GAGGAGCTGA AGCAAAAAGT CGATGGATTG AACTCTGAGC TTGCAACCGC TGAATCATCA ATCTCCCAAG GCGAATTACC
CATGGTACTT ACTGTACATA CATACAAATA AATAAATATA TATATATATA TATATATATA TCAGAGAAAT CTAATTGAAG
ATTAAAAGGA TATTACATCC TTTAAATGCA TCAGTTATAT TCTGTTTTTT TTTCATACAA TAATTACATG AACTTTTTGT
ATATATCTGC AAACATTTCA CAGGTCACTG TAGAAACCCT AGAAAGGGGT TTCCTCATTA ATGTGTTTTC AGAAAGAAAT
TGTCCCGGCA TGCTTGGGGC AATTCTGGAC GCGTTTGAAG AACTGGGACT CGATGTGCTT GATGCTAGGG TTTCTTGTGA
AGACACTTTC CAGCTTGAAG CTGTTGGAGG AGAAGTAAGA AAATTAACAC AACCATATAA ATGATGATTT AATTCCTTTA
TTTTTTTTTC TATCTTAATA AGAATAGTTT AAATCATATA AATGATGATT TACCAAATTG ATAGTTAATT CTTCTTTTAA
TTTCAAAGTC CAAAGTACTG ACATAATAAT GAGTGTGGCT CCCATGTGTA GATTCGTTTA ACCGTGTTGT GTAGTTGCAT
GGGCCTTGTA TCAGCCAATA AAGCAAGAAT AACGATACTA TATTATAGAT AAATTTTATA TGAAAAATTA TACAATTTTA
AGACAGGGAT AAGAAGAAGA AACAGCAGCA TTAGATAAGA TAAGTGATGT GATGGAAAAA GATTAAAAAA AATCGAAAAC
AAAATTATTA GAGGGCGTTC CATTAAGCAT ATATACATAG ACAGGTACAT TATCCATGTT TTGTCATGGA GTTACAGTGT
TGATTTTGAT GGGTTGTAAC ACTGAAAAAC GTTTTGGTTT TGCAGAGTGA AGAGAAGGAA AACATCGATG CACAAGTGGT
GAAGCAAGCA GTGATGCAAG CAATCCAAAA CATGGATTAA TCAAAGGAAA TTGTTCTAAG AAAGTAGCAG GCTGGTTCTA
AAAATCTTTG TATTAAATAT TAAAAAGTTA CGTATCCTAG TGAGAGAGTT GAAGTTTGAT ACTATATTCT GCCAAAATGT
AAAGTACCTC TCAATGACCC TTACATGTGA TGTGGCTTCT TCGTTTGTAG GAAAGAACAA ATGGACAGGG ATCGTCCAGG
TTAATGGGTG TTTTAATTAG AATTCTAAGA AGTTTGGAAG AAAGGAAGAA AAAAATAATA TTCTTTTTTG GGTTTCCAAG
AAACACACTC ATTGTCAATT TATGTTTATT AAAGTCTATT TAAGTTGTAA TCTTCAATAG TTTTATTA

>Vigan.09G105500.01
CAGCCCCTAA GCCTCAGATG GGAAAGAAAA GGCATCAAGA AACCAAAACC CAAAATCAAT CAGAAGAAAG TTGGAAGAAT
CATGGATTCT AGGAGGCGTA GAAATATGCA ACGCAAGTTG CAACAACTTC GATCGGTCAC AAACTCCAGT GCTGTTAACA
AAGCCTCAAT TATTGTGGAT GCCACAAGAT ACATAGAGGA GCTGAAGCAA AAAGTCGATG GATTGAACTC TGAGCTTGCA
ACCGCTGAAT CATCAATCTC CCAAGGCGAA TTACCCATGG TCACTGTAGA AACCCTAGAA AGGGGTTTCC TCATTAATGT
GTTTTCAGAA AGAAATTGTC CCGGCATGCT TGGGGCAATT CTGGACGCGT TTGAAGAACT GGGACTCGAT GTGCTTGATG
CTAGGGTTTC TTGTGAAGAC ACTTTCCAGC TTGAAGCTGT TGGAGGAGAA AGTGAAGAGA AGGAAAACAT CGATGCACAA
GTGGTGAAGC AAGCAGTGAT GCAAGCAATC CAAAACATGG ATTAATCAAA GGAAATTGTT CTAAGAAAGT AGCAGGCTGG
TTCTAAAAAT CTTTGTATTA AATATTAAAA AGTTACGTAT CCTAGTGAGA GAGTTGAAGT TTGATACTAT ATTCTGCCAA
AATGTAAAGT ACCTCTCAAT GACCCTTACA TGTGATGTGG CTTCTTCGTT TGTAGGAAAG AACAAATGGA CAGGGATCGT
CCAGGTTAAT GGGTGTTTTA ATTAGAATTC TAAGAAGTTT GGAAGAAAGG AAGAAAAAAA TAATATTCTT TTTTGGGTTT
CCAAGAAACA CACTCATTGT CAATTTATGT TTATTAAAGT CTATTTAAGT TGTAATCTTC AATAGTTTTA TTA

>Vigan.09G105500.01
ATGGATTCTA GGAGGCGTAG AAATATGCAA CGCAAGTTGC AACAACTTCG ATCGGTCACA AACTCCAGTG CTGTTAACAA
AGCCTCAATT ATTGTGGATG CCACAAGATA CATAGAGGAG CTGAAGCAAA AAGTCGATGG ATTGAACTCT GAGCTTGCAA
CCGCTGAATC ATCAATCTCC CAAGGCGAAT TACCCATGGT CACTGTAGAA ACCCTAGAAA GGGGTTTCCT CATTAATGTG
TTTTCAGAAA GAAATTGTCC CGGCATGCTT GGGGCAATTC TGGACGCGTT TGAAGAACTG GGACTCGATG TGCTTGATGC
TAGGGTTTCT TGTGAAGACA CTTTCCAGCT TGAAGCTGTT GGAGGAGAAA GTGAAGAGAA GGAAAACATC GATGCACAAG
TGGTGAAGCA AGCAGTGATG CAAGCAATCC AAAACATGGA TTAA

>Vigan.09G105500.01
MDSRRRRNMQ RKLQQLRSVT NSSAVNKASI IVDATRYIEE LKQKVDGLNS ELATAESSIS QGELPMVTVE TLERGFLINV
FSERNCPGML GAILDAFEEL GLDVLDARVS CEDTFQLEAV GGESEEKENI DAQVVKQAVM QAIQNMD*