GBrowse Details

Vigan.09G104200.01

Basic Information:
Name: Vigan.09G104200.01
Multiple alignment
Variant Information
Position: Chr09:15190693..15192009 (+ strand)
Length: 1317
Functional Information:
Description: Similar to Uncharacterized protein. [I1J7L2, Glycine max]
InterPro: LURP1-like domain (IPR007612)
Tubby C-terminal-like domain (IPR025659)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.92,2.84,0.15,0.00,0.52,0.00,1.04,0 .00
Structure :
Position: Chr09:15190693..15190876 (+ strand)
Length: 184
Type: five_prime_UTR
Position: Chr09:15190877..15191098 (+ strand)
Length: 222
Type: CDS
Position: Chr09:15191338..15191565 (+ strand)
Length: 228
Type: CDS
Position: Chr09:15191722..15191871 (+ strand)
Length: 150
Type: CDS
Position: Chr09:15191872..15192009 (+ strand)
Length: 138
Type: three_prime_UTR

>Vigan.09G104200.01 class=Sequence position=Chr09:15190693..15192009 (+ strand)
TTTCAAACTT GCTCATTGAC CACTTCGTAT ATTTTCTCAT GTGTGTTATA ATATATATGT AAAGTATCAA TCAAAGAACA
CACATGCACC CCCCACAAGC CAAAGTGAAT TAAACTTTCA CAAGATATTC AAAGGTCAAA ATCTACATCC ATCAACTTCT
TCATAATCTT TCAAAGTTGA AATCATGCAA AACCAACAAC AAGGTATCAT CAACCCTAAG TATTGTGCTC CACATAATGT
TGACCTAGCA ATTGTCAGAA AGGTATTAAC GTTAACTGAT ACTTTTTCCG TCACCGACGT TAATAGCAAA ATGATCTTCA
ACCTTAGTGC CTCTCTCTTG ACCCTCCACA ACCACCGTGT CTTGGTTGAC GCCGCCGGCC AACCCGTCGT CACACTGCGT
CGGAAGGTTT GATAATCTAT GTACCCTTTT ATTTTATATC TTTATTTCAT CTTCCTTATT ACTTTGTTTA GCTTTTTAAT
TGGTGAAGAA TATGAATTAA CAAAAACTTT GATATGTATG TTGTTTTCTC AAACTTCGAT AATCAAAATT ACAACTTAGA
TCCACTCTCC GATTTTGTTT AGAAGCTTGT GTTAAATCAT CATGTTTCAA TAGTTTTATG AAACGATTCG GATTTTTTTA
TGTAGATGAC GACAACTCAT GATCGGTGGC AAGTTTTTCG AGGTGAAAGC ATGGAGATGA AAGATTTGAT CTTTAGTGTG
AAGAGATCGT CGTTTTTTCA GTTAAAGACA AAATTGGATG TTTTCTTAGC AAACAATACT AGAGAAGAAG TTTGTGACTT
TAAGGTAAAA GGAAGTTGGT TCGAGCGATC TTGTGTTGTT TATGCTGGTG AATCTCTCAC CATTGTTGCC CAGGTGAACC
TTTTGCTCTT TTCCTATGTA TTATAAATAT AAAATTTTAA TGTTCGAGGA ACTAACTATG TTAATGACAT AACCTCAGAC
TTTGTAATTT CATCATAATA TTTTTAGTAT TAAAATTATG TCTGAAATTG AATGTGAATG TGATTGCAGA TGAATAAAAA
GCACACTGCT CAAAGCATTG CGTTTGGGAA AGATAATTTC ATGGTTACAG TGTATCCAAA CATTGACCAT GCATTCATAG
TGGCACTGAT TCTGATTCTG GACGAAATTA ACCAAGACAA GAGACAATCT CAGAATTGAT TATTAATATT CAGCATTTTG
GGTTCCCTAG TTCTCATCAA AATGTTCATT CTTCGAGACA AAAATTGTGA CATAAGAAGA GTAGTCTCAA TTCCTTGCCG
TCCTGTATTT GCTTTTAATA TCATAATATT TTTATTA

>Vigan.09G104200.01
TTTCAAACTT GCTCATTGAC CACTTCGTAT ATTTTCTCAT GTGTGTTATA ATATATATGT AAAGTATCAA TCAAAGAACA
CACATGCACC CCCCACAAGC CAAAGTGAAT TAAACTTTCA CAAGATATTC AAAGGTCAAA ATCTACATCC ATCAACTTCT
TCATAATCTT TCAAAGTTGA AATCATGCAA AACCAACAAC AAGGTATCAT CAACCCTAAG TATTGTGCTC CACATAATGT
TGACCTAGCA ATTGTCAGAA AGGTATTAAC GTTAACTGAT ACTTTTTCCG TCACCGACGT TAATAGCAAA ATGATCTTCA
ACCTTAGTGC CTCTCTCTTG ACCCTCCACA ACCACCGTGT CTTGGTTGAC GCCGCCGGCC AACCCGTCGT CACACTGCGT
CGGAAGATGA CGACAACTCA TGATCGGTGG CAAGTTTTTC GAGGTGAAAG CATGGAGATG AAAGATTTGA TCTTTAGTGT
GAAGAGATCG TCGTTTTTTC AGTTAAAGAC AAAATTGGAT GTTTTCTTAG CAAACAATAC TAGAGAAGAA GTTTGTGACT
TTAAGGTAAA AGGAAGTTGG TTCGAGCGAT CTTGTGTTGT TTATGCTGGT GAATCTCTCA CCATTGTTGC CCAGATGAAT
AAAAAGCACA CTGCTCAAAG CATTGCGTTT GGGAAAGATA ATTTCATGGT TACAGTGTAT CCAAACATTG ACCATGCATT
CATAGTGGCA CTGATTCTGA TTCTGGACGA AATTAACCAA GACAAGAGAC AATCTCAGAA TTGATTATTA ATATTCAGCA
TTTTGGGTTC CCTAGTTCTC ATCAAAATGT TCATTCTTCG AGACAAAAAT TGTGACATAA GAAGAGTAGT CTCAATTCCT
TGCCGTCCTG TATTTGCTTT TAATATCATA ATATTTTTAT TA

>Vigan.09G104200.01
ATGCAAAACC AACAACAAGG TATCATCAAC CCTAAGTATT GTGCTCCACA TAATGTTGAC CTAGCAATTG TCAGAAAGGT
ATTAACGTTA ACTGATACTT TTTCCGTCAC CGACGTTAAT AGCAAAATGA TCTTCAACCT TAGTGCCTCT CTCTTGACCC
TCCACAACCA CCGTGTCTTG GTTGACGCCG CCGGCCAACC CGTCGTCACA CTGCGTCGGA AGATGACGAC AACTCATGAT
CGGTGGCAAG TTTTTCGAGG TGAAAGCATG GAGATGAAAG ATTTGATCTT TAGTGTGAAG AGATCGTCGT TTTTTCAGTT
AAAGACAAAA TTGGATGTTT TCTTAGCAAA CAATACTAGA GAAGAAGTTT GTGACTTTAA GGTAAAAGGA AGTTGGTTCG
AGCGATCTTG TGTTGTTTAT GCTGGTGAAT CTCTCACCAT TGTTGCCCAG ATGAATAAAA AGCACACTGC TCAAAGCATT
GCGTTTGGGA AAGATAATTT CATGGTTACA GTGTATCCAA ACATTGACCA TGCATTCATA GTGGCACTGA TTCTGATTCT
GGACGAAATT AACCAAGACA AGAGACAATC TCAGAATTGA 

>Vigan.09G104200.01
MQNQQQGIIN PKYCAPHNVD LAIVRKVLTL TDTFSVTDVN SKMIFNLSAS LLTLHNHRVL VDAAGQPVVT LRRKMTTTHD
RWQVFRGESM EMKDLIFSVK RSSFFQLKTK LDVFLANNTR EEVCDFKVKG SWFERSCVVY AGESLTIVAQ MNKKHTAQSI
AFGKDNFMVT VYPNIDHAFI VALILILDEI NQDKRQSQN*