GBrowse Details

Vigan.09G091100.01

Basic Information:
Name: Vigan.09G091100.01
Multiple alignment
Variant Information
Position: Chr09:13100329..13103244 (- strand)
Length: 2916
Functional Information:
Description: Similar to Uncharacterized protein. [Q9FHW0, Arabidopsis thaliana]
InterPro: Protein of unknown function DUF538 (IPR007493)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:98.10,23.59,44.73,31.24,74.63,76.76, 66.75,33.26
Arabidopsis thaliana homolog: AT3G08890.1
Automatic updates:
Name: NM_001251268 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527068 (LOC100527068), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:13100329..13100627 (- strand)
Length: 299
Type: three_prime_UTR
Position: Chr09:13100628..13100998 (- strand)
Length: 371
Type: CDS
Position: Chr09:13102038..13102092 (- strand)
Length: 55
Type: CDS
Position: Chr09:13103034..13103120 (- strand)
Length: 87
Type: CDS
Position: Chr09:13103121..13103244 (- strand)
Length: 124
Type: five_prime_UTR

>Vigan.09G091100.01 class=Sequence position=Chr09:13100329..13103244 (- strand)
AAGGAGCCAC GTACTTCTTC TCCATCACGT TTGTGTTTTC TCTCTCTTTC TCTTTATCTG AAGGAAGAAG AGAGACAGAG
AGAGAAAGTT CCTCTGGGAT CGAAATCAAA CGTTGTTGAC CGAAATGGAT CAGGTATTCA ACAAGGTCGG ATCCTATTGG
TTCAACCAGA AAGCCACCAG CCAACTCAAT TCCGTCGGTG ACGACATCAA TGTACCCTCC CTCTCCACCC TTTTTCCTTT
TTCTTTCAAA ATTTCTCTTC TTTTTCATCA TGGTCAAAAG GCAATTTCCT GAATTCAAGT ATAACATGAA TTGTTGTTGT
TGATTTTTAT GTGATCATCC CGCTATTCAG AAAAAAAAAA TGTGAATTTA TTAGGATTTT GGATTGTTGC ATGGCATCCT
ATGCAAATTG GAATCCTGCT TTTAGGTTAC ATTTGATCAA TTTTGGTTGG GTGTAAATTG TAATAACTAC AGTGGGAAAT
TGAATGTGTG GTGTATTGGT TTACTGAATG ATGATTAGAT CATTTTAGCA TAGGAATATA GAGTTGAATG CTTAGTTTGG
AAATTTGTGT TGAGAATGTA CAATGGAAGG TGGAGAAGCT GTTATTTGGT TGTCCAAGTA AATAAAATTT TGTGAGAGCA
TGTTTCCAGG ATCAATTTAA GATTCAGAGA GATGAGACAT GAAAAACAAT TCTCTTACTT CGATCGATCA TGCTAAGTGA
TGTCACATTA TAGGCTAAAG TCTAATGTCT TTTATGGCTA GAATGTGTAT AATTATGACA GGATATGGTT AAAATGAGTT
TTAACTATCA TGTACTTTGA AAGATTTTAA CTTAATAAAG GCGTGTTGGC TGATTAATAT CGTTGTTTAC TCAGCATCTA
ATATTCGCGC TTGTTTGAGA TGATTAGTGG GAAAGGTGCA AGCATTAAGT GTTTAAGCAC GATTTACCTG CATGCTGATA
AATTGAAAGA AATTTAGGTA ATCCTTCATC ATCTCTGTTA CAAACCTCAT CTTGTAAGAA ATAATTTACC CTCTCGTATG
TTCAACTGTG AATGGAAATG TTTCTGCTAC TGCTAGAATG TGCTAAATGT TTACGAAGAA TGATCATTGG TTGATTAATT
TCTATGCTGA CACATTTTCT TTTGATGATC AGTCGTTGTC AAACAGTATT GAAGGGGGAA CCAAATGGTT GGTCAACAAA
ATAAAAGGTT TGTATTTCTT ATCTAATCAG TACTCGAACA TTCATCCTAC AAGTGTTGCT GTAAAAGATT TCACTTAATT
TATCCACGTA ATGCCATGTA AAAGAGTTGA CAGAAAGTAG ATCAAAACAT ACTCTGTTCT GGTGAATCTA TTCTTTTGTA
ATGTGGATAC TGACATCAAT GTTTTATCTA TACCTGTATG GTGTCTCTGG AATGGAAGAC AGAACTGAAA CTGGTAATGG
GTAACAGTAT CCAAGAGGAC CTGCATACAC CCTCACTCAT AGCCTCCTAT TTTTCACCTC TCCTTTATAT ATGCATACTA
GTCCATATTT CCCTCCAGCT GTGTTGAGTG CCTTACACTC GGTTTACATT AATAATTTCC TTCCTCGAAT TTCATTTCCT
CTTGATAATC ACTTTTCCAG TATGTTGCAT TAACCTTTCC TTTTACAATT TTGGTTATAT GGTCTACTAT CTTTACTTCT
ATAATCTGGA TAACATAATT TATCTAAACA CATTAATGAT GTCAAACCAC CAATACTTCT GCCTTATTTC TCCATTTCTT
GAATGTTTCA TTACTCGAGC ACATGATTTA AATTCTCATG GTGCCATTTG ACATATCACT GTTAGTATTT ATCAAATACA
GACAGATATC TTCCTTGAAG GTCACACAAA AGTACATTAA TATCATTATT GTAGTGTTAC TTAGAGTTTT AATTTGGAAT
TTACAACCGA TGAAAATGAA ATTTGTATTT GAAATTAATA ATTCAGGTTG CATACAGTCT TTCTATCCAA TCATTATTTC
TTAAGTTATA AATTGCATGC TTATTGAGTC TCAATGTATT ACTAATTATT TATTGGGTAT TTGGGTTTAC CATCCCACTT
TCATGGATTT TGGAAACATG CTTAACTCTT ATCAACCCTT TTCAACATAT ATTTACTTTC ATCATAATAC TTGAGGAAAG
GTAATAAAAT TGGAATGTCA TCCCTGATAT CCCGTTTTTA TTTTAATTGA TATTACGTTT GAGCTCTCAC AGAAATCACG
TTACAGGGAA GATGCAAAAG CCATTACCAG AGTTGCTAAA GGAGTATGAT CTACCAATTG GAATCTTTCC TCGTGATGCA
ACAAACTATG AATTCAATGA AGAGACTAGG AAGCTCATCG TTTACATTCC TCAGGTATGT GAAGTAGGCT ACAAGGATTC
ATCAGTCTTG CGTTTCTTCA CCACTGTGAC CTGTTATTTG GAGAAAGGAA AGCTAGCAGA GATAGAAGGA ATGAAGACAA
AAGTGTTGAT CTGGGTGAAA GTGACAACCA TTATGTCAGA GGGATCAAAA CTTTATGTGA CAGCTGGCAT GAAGAAAACA
AGGAGTAGGG AAGCATATGA GTTTACAAGA GATGGTGTAT GCGTAGATAA GTTCTAAAAC CTTGCATCAT GTTTGTTAAT
AGCTTTTACA ATCAGTTAAA TCCCTGTTTG TTCTTGTGGG CTCTTTCTAT CTCTTTTTGC GTGAATGGTT ATTGTAATTT
GCAAGTAGTA TTCAAATATG CACTTCAAAT ATTGCCCTTT TACTTGAACG TTGTAATTTG GTGCAAGTGA AACGTCCCTT
TCGTCCTTGA TCATCTAGGG TATGTTTGGT TTTCTGTCAG GAGATCTCCA ATGACCATTT AAAAAGTAAA ATTTAAAAAG
CCTTTTCAGT GAATTTCAGT TGAGTCCAAT TGTAAA

>Vigan.09G091100.01
AAGGAGCCAC GTACTTCTTC TCCATCACGT TTGTGTTTTC TCTCTCTTTC TCTTTATCTG AAGGAAGAAG AGAGACAGAG
AGAGAAAGTT CCTCTGGGAT CGAAATCAAA CGTTGTTGAC CGAAATGGAT CAGGTATTCA ACAAGGTCGG ATCCTATTGG
TTCAACCAGA AAGCCACCAG CCAACTCAAT TCCGTCGGTG ACGACATCAA TTCGTTGTCA AACAGTATTG AAGGGGGAAC
CAAATGGTTG GTCAACAAAA TAAAAGGGAA GATGCAAAAG CCATTACCAG AGTTGCTAAA GGAGTATGAT CTACCAATTG
GAATCTTTCC TCGTGATGCA ACAAACTATG AATTCAATGA AGAGACTAGG AAGCTCATCG TTTACATTCC TCAGGTATGT
GAAGTAGGCT ACAAGGATTC ATCAGTCTTG CGTTTCTTCA CCACTGTGAC CTGTTATTTG GAGAAAGGAA AGCTAGCAGA
GATAGAAGGA ATGAAGACAA AAGTGTTGAT CTGGGTGAAA GTGACAACCA TTATGTCAGA GGGATCAAAA CTTTATGTGA
CAGCTGGCAT GAAGAAAACA AGGAGTAGGG AAGCATATGA GTTTACAAGA GATGGTGTAT GCGTAGATAA GTTCTAAAAC
CTTGCATCAT GTTTGTTAAT AGCTTTTACA ATCAGTTAAA TCCCTGTTTG TTCTTGTGGG CTCTTTCTAT CTCTTTTTGC
GTGAATGGTT ATTGTAATTT GCAAGTAGTA TTCAAATATG CACTTCAAAT ATTGCCCTTT TACTTGAACG TTGTAATTTG
GTGCAAGTGA AACGTCCCTT TCGTCCTTGA TCATCTAGGG TATGTTTGGT TTTCTGTCAG GAGATCTCCA ATGACCATTT
AAAAAGTAAA ATTTAAAAAG CCTTTTCAGT GAATTTCAGT TGAGTCCAAT TGTAAA

>Vigan.09G091100.01
ATGGATCAGG TATTCAACAA GGTCGGATCC TATTGGTTCA ACCAGAAAGC CACCAGCCAA CTCAATTCCG TCGGTGACGA
CATCAATTCG TTGTCAAACA GTATTGAAGG GGGAACCAAA TGGTTGGTCA ACAAAATAAA AGGGAAGATG CAAAAGCCAT
TACCAGAGTT GCTAAAGGAG TATGATCTAC CAATTGGAAT CTTTCCTCGT GATGCAACAA ACTATGAATT CAATGAAGAG
ACTAGGAAGC TCATCGTTTA CATTCCTCAG GTATGTGAAG TAGGCTACAA GGATTCATCA GTCTTGCGTT TCTTCACCAC
TGTGACCTGT TATTTGGAGA AAGGAAAGCT AGCAGAGATA GAAGGAATGA AGACAAAAGT GTTGATCTGG GTGAAAGTGA
CAACCATTAT GTCAGAGGGA TCAAAACTTT ATGTGACAGC TGGCATGAAG AAAACAAGGA GTAGGGAAGC ATATGAGTTT
ACAAGAGATG GTGTATGCGT AGATAAGTTC TAA

>Vigan.09G091100.01
MDQVFNKVGS YWFNQKATSQ LNSVGDDINS LSNSIEGGTK WLVNKIKGKM QKPLPELLKE YDLPIGIFPR DATNYEFNEE
TRKLIVYIPQ VCEVGYKDSS VLRFFTTVTC YLEKGKLAEI EGMKTKVLIW VKVTTIMSEG SKLYVTAGMK KTRSREAYEF
TRDGVCVDKF *