GBrowse Details

Vigan.09G044700.01

Basic Information:
Name: Vigan.09G044700.01
Multiple alignment
Variant Information
Position: Chr09:5535145..5540001 (- strand)
Length: 4857
Functional Information:
Description: Similar to Uncharacterized protein. [Q0PJJ4, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.03,0.00,31.38,0.00,0.00,0.00,0.00, 0.00
Arabidopsis thaliana homolog: AT3G27810.1
Structure :
Position: Chr09:5535145..5535789 (- strand)
Length: 645
Type: three_prime_UTR
Position: Chr09:5535790..5536129 (- strand)
Length: 340
Type: CDS
Position: Chr09:5538777..5538906 (- strand)
Length: 130
Type: CDS
Position: Chr09:5539050..5539188 (- strand)
Length: 139
Type: CDS
Position: Chr09:5539189..5540001 (- strand)
Length: 813
Type: five_prime_UTR

>Vigan.09G044700.01 class=Sequence position=Chr09:5535145..5540001 (- strand)
GTGAATATAT AATGGTCTTT ACAAACAACG TCTTCAAATT TGTAGAGTTG GCAACTTTAC TTTTGTTCAA TAGGTCAATT
TGAACAATCT GAAATAAACT TTTCTACTTT AAATACTCAT GGGTGAACTC ATCGATACCG TATTGTACTT TTCAAATATG
TAGTGTAGAG ATGAAGTGTG GTGGGTCAGA TTTTAGGGTT ATAATAATAT AAACCACAAT TCCAACTCAT TATTTTCATT
GTTTGCATGG TATTGGATTC CGCTTTAACA TAATCTACTT TCAGGGCGAA AGTTTTGAAG AAAAATATTT TAAAATGAGC
TAGGGGGCCA ACTTTTTTGT TCGCATGGGA TGATGTAACC ATGGTGACAG ATAACTTGAA AATTTTCAAG TCTATTATGT
TCTTTTCTTT GTATTATAAT CCCTAAACTG CACTAATTGT TTAATAGCAC AGGGCTTAAA ATATTTATGA AATATCTACA
ATCCTCTCGT GTTTTGGTAA AAAAAATGAG TATAGACACC TGATATGATC TAGTGCATGT GCGTGACTTA AGAGTACGTA
GTGACACTAT TCTATTAAGT TTTAGTTTTG CCAAAGGAAA CCAAAAACAT AGTCATGCAT GCATGTGTTA ACATGATAAA
CACAGTTAGG TACGTAAAAT CTAGTTAACC CTAATAGAAA ATTTCATTAA AATTAACACA TTATTTATTC TTGCCTCTAT
TTAAACACTC CAACCCCCAT TATTAAGTTA TCGGTATTTC TCTTTCTCCC TCTTCCCCAC CCCATCTTTC TCTCTATCAC
AAACAAAAAC AAAATGGATA AAAAACAGTG CAATACGTCT CAAGATCCTG AAGTGAGAAA AGGGCCATGG ACAATGGAAG
AAGATTTGAT CTTGATCAAC TATATTTCGA ACCATGGGGA AGGTGTTTGG AACTCTTTGG CCAAAGCTGC CGGTAAGCAT
ATTTTTTTGT TCTTCAACTT TTATTATTCT TTGAGAATTA TAATTTTATA TTTTTTTTCT TCTATTATTT TTTTTCATTC
ATACTTAAAC CCCAGGGTGG GAGAAAACGA TTCATGATTA TGCATGATAT AACAGGTCTT AAACGTACTG GAAAGAGTTG
CCGACTTAGG TGGCTAAACT ACCTCCGTCC TGATGTTAGA AGAGGGAATA TTACACCCGA GGAACAACTT TTGATCATGG
AGCTTCACGC AAAGTGGGGA AACAGGTAAT TTTTTAACAT GTTTTCTTAA TTAATATGAT GAAATTGACA AAGGAAACAA
AGATCTTTTA TTATTTCAAA TAAATTATAT TTCACCCAGA AATTATATAA TTTTGTGAAC CATTGTTTAT TTTCTAACCA
TTAAAGAAGT TTTTTTGCTT TCTTTTAAGT TGTAGTATTT GGTTTGGAGG CAATCGAACT AGAAGGCCCG TGAGTACAAT
AGTCTTGGAG AACTATATTT GAGGGGGATC GAGGGAGTGT AGTCGGGGAG AAAACTCTAG CCAAGGGAAA GGTTTAAACA
TATGCGGGTT TGTAGAACTT TTTTCCACAA ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT
ATTTATTTAT ATATATATAT ATATATATTT ATATATCTAT ATATATATAT ATTTATATAT CTATATATAT ATATATATAT
ATATATATAT ATATATATAT ATATATATAT ATATATCTTT GATAAAACTG TATTTAATTG TTTTAGAGCC TTCAAAATCA
TTGTGTTCGA TTGCCTCCAA ATCCACGAAT TGGACTGTTT TCCTTTGAAG GGTACATATT ATGCATCAAT CCTTACTGTT
GCATTAATCC TCGCCCTAGC TCCCCCTCTC TCCTATATAT GTATGCATAT CTCAGGCGGG AGAGAGGTCC TTTAGATCTA
ACAATAATCA CCACCAGTTA ATCAACACCA GCGTTCTTCT TCTCCATATG ATCTTCAATT CTGTGCTTTT ATTTTAATTT
TTCATGATGT CTGTTAATTG GAGGAAGGTT TTCATTTTTT TTGTCAAATT GTAGCATAAT TTTTTAATTT CTAATTATTC
GTGTAAAAGT TGCAGGTGAA TTAGCTGCGT GGAAGATTCT TTATATTTAT TTTCAACTGA ACATAAATCA TACTATGATC
TTTTTTATTT TCATCACATA TATATAAAAT CTAAAGTAGA TGATGAATAT AAAAGTACCC ATTTTAATTA TTTGAAAAGT
CATATATTGT GTTAAAAGCG CATGAATACC AGCTTTTAAA CGAATAAAAA AAAGATGACG TAAGGGTTTT GGACATAAGA
TAGAAAAATT GTTGATGATA GTAAAATATA TGAAGGTTGG AAAAGGGGGA TGAATTGCAT ATGAAAAGAC GAGAAAATCG
GGTATAAGTA GTAAAGTTAA AAGAGATTAC CTCAAAGAAG AAATATGGTA TTAGAAGTTG TTTCTGAATA GTTAGTAGCA
TTAAGTATAT GTAAAGGTGT TTTAATTTTG AAAAGCGGCA TATAGTTTTA CAAATGACTA TTTCTACAAG GCTTATGGGG
AGGAGTAAAT AAGTTGGACA AGAGGACCTT CCACTTTGGG TTGAACTCAT GGAAGTGCGC ATATCTTTAT AGCTTTCTAG
TTCGGATGAA AGAGAGTTTG AGTGAAAATA GACCCAAATC ATACACTTTT GGCTCTTCTT AACAAGGGCA GGTGTCCTTG
TAAATTTTAG AGCCTCCCCT TGAAGATAGA CTTACATAGT GCATATATAA ACTGAGGATA TACTTACATA GTGCATATAA
TAACTAGTTA GCACCATCCT TGCTTTCTCA GTATCCAAAT TGCCTCTCAA CCAAGAAAAC AAACGATCAA CAATAAAAGT
GGAAAAGAAA ATATTTAACC TAACTAAGTT TTCAAATATT GCATTTACTA TGTATAACAA AAATGAATAG TATTATTAAT
GAGGCGCGCA TTCAGATGTG CCTTTTTTTG AAATAAGCAA GATGAGTTTA TAGTCAAATA AATTAATGAC GCAAATTATT
AAAAGAAACG AAGGTGACGC GATTAAGAGT TGCTAGAAAA TTTGTATGCG TGCGTATGTA TGCGTGTATG TATGAAGAAG
GGATATGGAT GGAAAAGAGA ATAGGAGACG TTTCGATTGA ACCATACTCT CTCTAGTCTC TACCTGAGGC ATGCTTTGAG
AAACCTGATT TTCTGTTCTT AGAGAACCCT TGCTACAAAG CAAGGGAATT ATCTTCATAC AGCAAAGGAA ATTTAGCATC
TTACGTACCT CAACACTGGT CGATTTATAA GTGTGAGTCC AAGATAACGT CACATTGATT CTCAGCCATG GAACATGGCT
TCCATCAGAC TCACAACCGT ATTTAATATA GGTGTTGCCA CTTTTTAGTT AATCAATAAA AGCTGTGGCA GTCATATATA
TAGGCAGTTT TTAATTACAT TTCTATTAAT GCTTTACATT TCAAGCAAAT TAAACAAATG TTTTATCTTA CTCTCACTCA
TGCACACTCG TGTACCCTCT TTTCCACAAC GCATTTCTAC AACCGACTAG CATTCTAGGT TTTCGTTCTG CTTCTCCGAT
ACTGTCATGA ATAGAACCAT ACTTATCAAA TTGTTTTGTA TAGTTTTCTA AAAGAAGTGA TTAAAAGCAA CAAAGTTTTT
ATGTAAAAAG CAAATTCTTA TCCTGTTGGT TGGTTTAATT AGAGTACAAA GTTTTTTCTT TCACACTGTT TAGTCATCGT
ATTAAAATGT TAAGGTTCCA AAATTTTTTA CAGCCAAAGC GTTAAAAAAC CAGTAGGGTA CTATTCAGTT ACATGACACT
GTCTTCTAGA AATAAATCAT TCACCAATGC AGGTGGTCAA AAATTGCCAA GCATCTACCA GGAAGGACTG ATAATGAGAT
AAAAAACTAC TGGAGGACCA GGATTCAGAA GCACATCAAG CAAGCCGAGA ACTCTCAGCA ACAGAGTAAT TCTAATTCTG
AGATAAATGA CCATCAAGCT AGCACTAGCC AAGTGTCCAC CATGGCTGAG CCCATGGAGA CCTACTCTTC ACCCTGTTAC
CAAGGAATGT TAGAGCCATT TTCTACTCAG TTTCCCAATA TTCCAGATCA ATCCAGTTGT TGTACCAATG AAAACAACAA
TTATTGGAGC ATGGAGGATA TCTGGTCAAT GCAGTTACTG AACGGGGATT AAATAAATAA TAAATATTAT AAAGATAAAC
TAAGTGCTTA ATTAAGTTCC ATAAAGCTGG AATCTCTCCT GCTGAAAAAC ATATATCATT AGGTTTGTTT ATATATAAAG
TAGTTGGATG TTTGGTTTTT CGTACAATTA TATGTCAGAA TCTAATTAGT TATGTGCTGT AATATATACG AGATCTTATA
TTAAACTGTA TCTGCATGCT TTTATATCAA ATGAGATGCT TTGTGCATCA GATATGGTTG AGAACCACAA AGTTTCCGAC
GTCTAATATA ATCCCAGTGG GCGTCTTCTC TCTCTAGTTT CGTTCATTTT TCCTTTCGTT GATTGTCTAT AAGATTAGTA
CTTTTAACTA TTTGATAGAG TGTTTTCAGA AAAAAACAAA TCATGTTCTT ACAGGTATAT AGATCAAACA TATGTAACCA
GGTGGTTACG AACATCATAT ATTCACCATG TTGGTAAACT GTTCTTTCTT CTCTTTCTTA TTACGCTCTA AAATGTTAAC
CAAAATCTTT TAGCACTGTA GATTATGTAG CAGCCCGAGC GTAAGATGTG TTTGGGATGG TAAGATAGTA GTGTCAAACT
CACCTTCATA TAAACGGAAA GACAGCCAGA CAAGTATGGG CATGAACTTG CATTTAC

>Vigan.09G044700.01
GTGAATATAT AATGGTCTTT ACAAACAACG TCTTCAAATT TGTAGAGTTG GCAACTTTAC TTTTGTTCAA TAGGTCAATT
TGAACAATCT GAAATAAACT TTTCTACTTT AAATACTCAT GGGTGAACTC ATCGATACCG TATTGTACTT TTCAAATATG
TAGTGTAGAG ATGAAGTGTG GTGGGTCAGA TTTTAGGGTT ATAATAATAT AAACCACAAT TCCAACTCAT TATTTTCATT
GTTTGCATGG TATTGGATTC CGCTTTAACA TAATCTACTT TCAGGGCGAA AGTTTTGAAG AAAAATATTT TAAAATGAGC
TAGGGGGCCA ACTTTTTTGT TCGCATGGGA TGATGTAACC ATGGTGACAG ATAACTTGAA AATTTTCAAG TCTATTATGT
TCTTTTCTTT GTATTATAAT CCCTAAACTG CACTAATTGT TTAATAGCAC AGGGCTTAAA ATATTTATGA AATATCTACA
ATCCTCTCGT GTTTTGGTAA AAAAAATGAG TATAGACACC TGATATGATC TAGTGCATGT GCGTGACTTA AGAGTACGTA
GTGACACTAT TCTATTAAGT TTTAGTTTTG CCAAAGGAAA CCAAAAACAT AGTCATGCAT GCATGTGTTA ACATGATAAA
CACAGTTAGG TACGTAAAAT CTAGTTAACC CTAATAGAAA ATTTCATTAA AATTAACACA TTATTTATTC TTGCCTCTAT
TTAAACACTC CAACCCCCAT TATTAAGTTA TCGGTATTTC TCTTTCTCCC TCTTCCCCAC CCCATCTTTC TCTCTATCAC
AAACAAAAAC AAAATGGATA AAAAACAGTG CAATACGTCT CAAGATCCTG AAGTGAGAAA AGGGCCATGG ACAATGGAAG
AAGATTTGAT CTTGATCAAC TATATTTCGA ACCATGGGGA AGGTGTTTGG AACTCTTTGG CCAAAGCTGC CGGTCTTAAA
CGTACTGGAA AGAGTTGCCG ACTTAGGTGG CTAAACTACC TCCGTCCTGA TGTTAGAAGA GGGAATATTA CACCCGAGGA
ACAACTTTTG ATCATGGAGC TTCACGCAAA GTGGGGAAAC AGGTGGTCAA AAATTGCCAA GCATCTACCA GGAAGGACTG
ATAATGAGAT AAAAAACTAC TGGAGGACCA GGATTCAGAA GCACATCAAG CAAGCCGAGA ACTCTCAGCA ACAGAGTAAT
TCTAATTCTG AGATAAATGA CCATCAAGCT AGCACTAGCC AAGTGTCCAC CATGGCTGAG CCCATGGAGA CCTACTCTTC
ACCCTGTTAC CAAGGAATGT TAGAGCCATT TTCTACTCAG TTTCCCAATA TTCCAGATCA ATCCAGTTGT TGTACCAATG
AAAACAACAA TTATTGGAGC ATGGAGGATA TCTGGTCAAT GCAGTTACTG AACGGGGATT AAATAAATAA TAAATATTAT
AAAGATAAAC TAAGTGCTTA ATTAAGTTCC ATAAAGCTGG AATCTCTCCT GCTGAAAAAC ATATATCATT AGGTTTGTTT
ATATATAAAG TAGTTGGATG TTTGGTTTTT CGTACAATTA TATGTCAGAA TCTAATTAGT TATGTGCTGT AATATATACG
AGATCTTATA TTAAACTGTA TCTGCATGCT TTTATATCAA ATGAGATGCT TTGTGCATCA GATATGGTTG AGAACCACAA
AGTTTCCGAC GTCTAATATA ATCCCAGTGG GCGTCTTCTC TCTCTAGTTT CGTTCATTTT TCCTTTCGTT GATTGTCTAT
AAGATTAGTA CTTTTAACTA TTTGATAGAG TGTTTTCAGA AAAAAACAAA TCATGTTCTT ACAGGTATAT AGATCAAACA
TATGTAACCA GGTGGTTACG AACATCATAT ATTCACCATG TTGGTAAACT GTTCTTTCTT CTCTTTCTTA TTACGCTCTA
AAATGTTAAC CAAAATCTTT TAGCACTGTA GATTATGTAG CAGCCCGAGC GTAAGATGTG TTTGGGATGG TAAGATAGTA
GTGTCAAACT CACCTTCATA TAAACGGAAA GACAGCCAGA CAAGTATGGG CATGAACTTG CATTTAC

>Vigan.09G044700.01
ATGGATAAAA AACAGTGCAA TACGTCTCAA GATCCTGAAG TGAGAAAAGG GCCATGGACA ATGGAAGAAG ATTTGATCTT
GATCAACTAT ATTTCGAACC ATGGGGAAGG TGTTTGGAAC TCTTTGGCCA AAGCTGCCGG TCTTAAACGT ACTGGAAAGA
GTTGCCGACT TAGGTGGCTA AACTACCTCC GTCCTGATGT TAGAAGAGGG AATATTACAC CCGAGGAACA ACTTTTGATC
ATGGAGCTTC ACGCAAAGTG GGGAAACAGG TGGTCAAAAA TTGCCAAGCA TCTACCAGGA AGGACTGATA ATGAGATAAA
AAACTACTGG AGGACCAGGA TTCAGAAGCA CATCAAGCAA GCCGAGAACT CTCAGCAACA GAGTAATTCT AATTCTGAGA
TAAATGACCA TCAAGCTAGC ACTAGCCAAG TGTCCACCAT GGCTGAGCCC ATGGAGACCT ACTCTTCACC CTGTTACCAA
GGAATGTTAG AGCCATTTTC TACTCAGTTT CCCAATATTC CAGATCAATC CAGTTGTTGT ACCAATGAAA ACAACAATTA
TTGGAGCATG GAGGATATCT GGTCAATGCA GTTACTGAAC GGGGATTAA

>Vigan.09G044700.01
MDKKQCNTSQ DPEVRKGPWT MEEDLILINY ISNHGEGVWN SLAKAAGLKR TGKSCRLRWL NYLRPDVRRG NITPEEQLLI
MELHAKWGNR WSKIAKHLPG RTDNEIKNYW RTRIQKHIKQ AENSQQQSNS NSEINDHQAS TSQVSTMAEP METYSSPCYQ
GMLEPFSTQF PNIPDQSSCC TNENNNYWSM EDIWSMQLLN GD*