GBrowse Details

Vigan.09G029300.01

Basic Information:
Name: Vigan.09G029300.01
Multiple alignment
Variant Information
Position: Chr09:3299881..3303817 (- strand)
Length: 3937
Functional Information:
Description: Similar to 5-hydroxyisourate hydrolase. [I1MM35, Glycine max]
GO: Biological Process: purine nucleobase metabolic process (GO:0006144)
Biological Process: transport (GO:0006810)
Molecular Function: hydroxyisourate hydrolase activity (GO:0033971)
InterPro: Transthyretin/hydroxyisourate hydrolase (IPR000895)
Hydroxyisourate hydrolase (IPR014306)
Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (IPR018020)
Transthyretin/hydroxyisourate hydrolase, superfamily (IPR023416)
Transthyretin, thyroxine binding site (IPR023418)
Transthyretin, conserved site (IPR023419)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.20,7.41,12.04,7.67,192.27,39.44,19 .08,14.57
Arabidopsis thaliana homolog: AT5G58220.1
Automatic updates:
Name: NM_001252922 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uric acid degradation bifunctional protein TTL-like (LOC100805930), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001255538 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uric acid degradation bifunctional protein TTL-like (LOC100788368), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:3299881..3300092 (- strand)
Length: 212
Type: three_prime_UTR
Position: Chr09:3300093..3300550 (- strand)
Length: 458
Type: CDS
Position: Chr09:3301257..3301407 (- strand)
Length: 151
Type: CDS
Position: Chr09:3301748..3301849 (- strand)
Length: 102
Type: CDS
Position: Chr09:3302231..3302288 (- strand)
Length: 58
Type: CDS
Position: Chr09:3303397..3303626 (- strand)
Length: 230
Type: CDS
Position: Chr09:3303627..3303817 (- strand)
Length: 191
Type: five_prime_UTR

>Vigan.09G029300.01 class=Sequence position=Chr09:3299881..3303817 (- strand)
CTTGTGCTGG CCAAAAGAAC ATTTCTACGT GGCTTTTTGT TTGCATCGCA AGAACAAGAC TAAGTGCTGA CACAGCGTCA
CATCCTCTTC TCTTCTCTTC TCTTCTCTTC CCACGAACAA ATCATAAAAA CAGTCCAATT CCAATATAAT TGTCAAAAAC
ACAAGCGAAC AGAGTGATTA GTGTTTGAAG AATGGAGTTC AGTTTCGACG AGAAAGACTT CGTATCGTGC TGTGGAAGCA
CCAAATTCGC CAAGGACATG GTTTTGGCTT CTCCTTTCAG TTCATTGCAG CACGCTGTTT CTGTGGCGAG GGATGTTTGG
TTCAACAACG TTGATGTCAA CGGTTGGCTT CAGGCCTTCT CTGCCCACCC TCAGATCGGG AATACCCATG CTCCATCTGT
TGCCTCTGAA GCCAGTGCTC AGTTCAGTAC TTGAATTCAT CTCTTTTTTC CATCTGGGTC ACTCTACTTT TTGTGTTTTG
CTGTGAAAGA TTTGATTTTT TTAGTGCAAA GGGTGTGTTT TTGTCTTTGT GGGTTGGTGG TTCTTTGGGT CTTCACTTGG
GATTTGTCAG TTCGCGTTCA GTTATTGATC CCTTCCGATC AGAAATTTAG CATGACTTTT GAAGTGGTTA ATGTAAAAGT
TAGAGAATTT CTAATACACG ATAGTTAGTA TATAGACTAT TTACTCTCTT TTTTAATCAC TTGGGTGGTT CTCTATTTTG
TGTATGGGAT GAAGCCGAGC GTATATAGTC TATGGACTGA CATGACAGAG ATTTTACATT ATCATTCAGT TATAAATCAT
CATGTATGGT TAATAGTTTA CTTTTATGCT ATCTTCAAAA TCCCATACTT CTATGATTTC TGATTGATTG ATATTGTGGA
AATTCATACT TACCATAGGA ATTAAACTCG TGAAACTAAT GAGTTAGGTA TGATTGTGGT TTTCTCTTTG AGTGGGTGCA
TGTGTTAGGT AATGGATTCC CTGCAATCAG GACTTCAGGT TGGAATGTTG GATGAATTTT GGACTACTCA ATCTGAGATG
CATATTTCAA GTCTGATCTA CTTAGATAAA ATATGAGGCG ACCAATGCTC ATCGAAAAGT TGTAATTGTG TGATAGAGTG
AATGTCCTAA ATCCCTGACT ACGGGAAATC TGTATCTGGG ATTTTAAGTT TCGTGTGGAG TTGTCAGTTG AGTTCAGTTA
TTCCTGCTAT TTTGCTCCTG TTTGGATGCA TTCTGTTTTG TGTTTTGATG CGAAACAAAT GAATTAGATG CAAAAGGTTG
AGTTTTAAGT TAGTTATGGA GTTTGTCAGT TCGGTTATTC AGTCCATCAT TTTTGTTCCT GTTTTTAACC ATCTGGGTTG
CTTTCTCTCC ATTTTACATT GATGTGAGAA CCTTGAGTGA ATGTTGTGAA TTTCCCTTCA TCTGGGTGGT GTTTGTCTGT
GGCTTCAGCT GTGATTTATG CAATGAGAAG GGTAAAGAAA TGTATATCCT ATTTGCTAGT TAGAAATAAT AAGGAACTGT
TTTATGCAGT TGGAGTAAAG GAGAGCAATC AACTGCTTTA TCTACTGCAA CTGGTTCCAG CTTACAGGTT TGCTTGCTGC
TGCTACTCAA AATATTACTA ATATTTTAGT TCTTTTTGAT GTACTACGAA ATATATGGTT GGAACCTGAT CGATCTACGG
TCTGCTGTCA TAATACTGAA CATACCATGT CTAATATATT GAATTGAAAA GCACCTTCTT TCCAAGAGTT TTAATTTCTT
TGCTAATATT TCACACGGTT AGCATCCTTC ATTGTGGAAT CTGCATCGTG GTTTACTATT GCTTTTATTA ATATTGTGGT
GGAAATTAGG CATTCATTAA CAGAACTTGG CTTTGGATGT GGCTGCAAAT TTATGGTTAG AGGGGGACCT CAACTGCAAT
GTTAACTGTT AATAGATGGA AGTTAATTAC CTGCGTGTCA TTTTTCAGGA ACTATCTCAA TGGAATGCTC GGTACAGGGA
AAAGTTTGGG TTTGTTTTTC TCATTTGTGC ATCTGGCAGA ACCACGGATG AGATACTTGC TGAGCTGAAG GTAAATTTGA
ATTTAAAGTT TAGTGTTGGC AATACTTTTA TTTATTTAAC TTCTATTCTT GATTAATGTC TATTTGGGTG AGTTTTTGTT
GAGCTATTAT GTTATGAACA TAGATTTGTT TAAGGTTACA CTATGGATTA ATTACTTTTA GAAGGTTGAG CATGATAGTT
CTTGTGATCT TCTTATTCAA AGGGTGGGGG ATATTCCTTC ATTCATTATC TCTTATGTGC CTAATTCAAT CATTCCAATT
TCCTACATTG GTTAGGAACC CGAATTATTA TGAAATGTTG ATATAAGACT TTTCATTTAA ATTTAAATTA ATTCATTTTA
CACTGTGCAG AGACGATATA CAAACCGGCC CATTGTTGAG TTTGAGATTG CTGCTCAGGA GCAAATGAAA ATTACAGAAC
TACGCCTTGC AAAGCTCTTT TCAAGTACAG AAGACATTTC TTCTAAAATT GGAAATTATT CCACTGCTAA AAAGGCAGAA
GGTACTTCCA TATTCTTTCC TGATTTATGT TTGGTTACAG TTTAAGAACC CCTTTTGATA TTGAAATCTG CATAGAAAAG
ATATAACTGT GTTCACTGTG TTTCCCTGAC AACCCTTCAA CTATTCAATT TGGTTTTGCT TATTGCTGTA TGTATTCATT
AATTGAAATG TAGCATATCA TCAGCCATTC ATCACTAGTC ATGACTTTTT GTGCAGAAGT AGAATGATCA AATATTTGAG
TTTTTCATTC ATTCATTCTT TCAGTGCATT AAAAGTTGAG TTCTACAATA TTCAAATCAT GGATACTAGT GATTTATTTT
TAACTATTAA CTGGTGTCAG AATCATGCGA TTGTGGCCTG TTATTAACCA TTTTGAACTA TGACATCTCT CAGCTAGACT
GACACCCCGT TCAACAATCA TTTGTCATCA TTCTAAAAGA GATGCAACAC AAAGACTATA TATATATATA TATATATATA
TATATTTGTT AAAATCAAAG TAACTTTCTC CTAAGATATT TCATATATTT CTAACTGTGA TGCATGTGGT ATCTGTGGAT
GGTAAATTGG TTTCTGAGTG CTCAACAAAA CCCTCCTCCT TTATTGTTTA TAAAATGTTG TGGTCTGAAT TTTCAAAACT
CTGCAACTTT TACATCATGA TGTTTACAAC AAGTTACCAA TCTTGGTTTC TAATTTTCCA ATGCTAGAAG ATCGCATTAG
CATCATCAGT AGTCATGTGA CTGCTGCTTC AGAGAGTTCA TCAGGTAAAC CAATTCAACA TCCTGCAAGA ACTCGCCCTC
CAATTACCAC TCATGTGTTG GATGTGTCGC GGGGCTCTCC GGCCGCCGGT ATTGAGGTGC TTCTGGAGCT GTGGAGGGGT
GTTCAGCCTC GGCCGACATT TGGGGCCACA GGCGGAGGCA ATTGGGTGTT TCAGGGGTCA TCGACGACGG ATCAAGACGG
CCGAAGCGGT CAACTGCTGA GCATAGTTGA CGATGTGAAT CCAGGAATAT ACAGGATAAG TTTCAACACT GGGAAGTACA
TCCCAAATGG TTTCTTTCCT TATGTGTCTA TAGTGTTTGA AATCAAGGAT TCACAAAAAA GGGAACATTT TCATGTTCCT
CTTCTGCTTG CTCCATTCTC ATTCAGCACT TACCGTGGAA GCTAGGAATA GAGGAACAGT TGCCAAATGA ATGCCACATT
GTGTTTGTGA CCATAGAACT TGGTAGAAAA AGGTACCAAA TTTAGATAGC TAATAAGTGT AGAATCCTTG AGTTAATGCA
TGTTATATAA GTTCTTTTGA ATCAACAATC GAGACTTGCA ATATTTGAGA CATGACTTCA ATATTTAAAT ACCACATTTA
TAGTGCATGA ACAAGGG

>Vigan.09G029300.01
CTTGTGCTGG CCAAAAGAAC ATTTCTACGT GGCTTTTTGT TTGCATCGCA AGAACAAGAC TAAGTGCTGA CACAGCGTCA
CATCCTCTTC TCTTCTCTTC TCTTCTCTTC CCACGAACAA ATCATAAAAA CAGTCCAATT CCAATATAAT TGTCAAAAAC
ACAAGCGAAC AGAGTGATTA GTGTTTGAAG AATGGAGTTC AGTTTCGACG AGAAAGACTT CGTATCGTGC TGTGGAAGCA
CCAAATTCGC CAAGGACATG GTTTTGGCTT CTCCTTTCAG TTCATTGCAG CACGCTGTTT CTGTGGCGAG GGATGTTTGG
TTCAACAACG TTGATGTCAA CGGTTGGCTT CAGGCCTTCT CTGCCCACCC TCAGATCGGG AATACCCATG CTCCATCTGT
TGCCTCTGAA GCCAGTGCTC ATTGGAGTAA AGGAGAGCAA TCAACTGCTT TATCTACTGC AACTGGTTCC AGCTTACAGG
AACTATCTCA ATGGAATGCT CGGTACAGGG AAAAGTTTGG GTTTGTTTTT CTCATTTGTG CATCTGGCAG AACCACGGAT
GAGATACTTG CTGAGCTGAA GAGACGATAT ACAAACCGGC CCATTGTTGA GTTTGAGATT GCTGCTCAGG AGCAAATGAA
AATTACAGAA CTACGCCTTG CAAAGCTCTT TTCAAGTACA GAAGACATTT CTTCTAAAAT TGGAAATTAT TCCACTGCTA
AAAAGGCAGA AGAAGATCGC ATTAGCATCA TCAGTAGTCA TGTGACTGCT GCTTCAGAGA GTTCATCAGG TAAACCAATT
CAACATCCTG CAAGAACTCG CCCTCCAATT ACCACTCATG TGTTGGATGT GTCGCGGGGC TCTCCGGCCG CCGGTATTGA
GGTGCTTCTG GAGCTGTGGA GGGGTGTTCA GCCTCGGCCG ACATTTGGGG CCACAGGCGG AGGCAATTGG GTGTTTCAGG
GGTCATCGAC GACGGATCAA GACGGCCGAA GCGGTCAACT GCTGAGCATA GTTGACGATG TGAATCCAGG AATATACAGG
ATAAGTTTCA ACACTGGGAA GTACATCCCA AATGGTTTCT TTCCTTATGT GTCTATAGTG TTTGAAATCA AGGATTCACA
AAAAAGGGAA CATTTTCATG TTCCTCTTCT GCTTGCTCCA TTCTCATTCA GCACTTACCG TGGAAGCTAG GAATAGAGGA
ACAGTTGCCA AATGAATGCC ACATTGTGTT TGTGACCATA GAACTTGGTA GAAAAAGGTA CCAAATTTAG ATAGCTAATA
AGTGTAGAAT CCTTGAGTTA ATGCATGTTA TATAAGTTCT TTTGAATCAA CAATCGAGAC TTGCAATATT TGAGACATGA
CTTCAATATT TAAATACCAC ATTTATAGTG CATGAACAAG GG

>Vigan.09G029300.01
ATGGAGTTCA GTTTCGACGA GAAAGACTTC GTATCGTGCT GTGGAAGCAC CAAATTCGCC AAGGACATGG TTTTGGCTTC
TCCTTTCAGT TCATTGCAGC ACGCTGTTTC TGTGGCGAGG GATGTTTGGT TCAACAACGT TGATGTCAAC GGTTGGCTTC
AGGCCTTCTC TGCCCACCCT CAGATCGGGA ATACCCATGC TCCATCTGTT GCCTCTGAAG CCAGTGCTCA TTGGAGTAAA
GGAGAGCAAT CAACTGCTTT ATCTACTGCA ACTGGTTCCA GCTTACAGGA ACTATCTCAA TGGAATGCTC GGTACAGGGA
AAAGTTTGGG TTTGTTTTTC TCATTTGTGC ATCTGGCAGA ACCACGGATG AGATACTTGC TGAGCTGAAG AGACGATATA
CAAACCGGCC CATTGTTGAG TTTGAGATTG CTGCTCAGGA GCAAATGAAA ATTACAGAAC TACGCCTTGC AAAGCTCTTT
TCAAGTACAG AAGACATTTC TTCTAAAATT GGAAATTATT CCACTGCTAA AAAGGCAGAA GAAGATCGCA TTAGCATCAT
CAGTAGTCAT GTGACTGCTG CTTCAGAGAG TTCATCAGGT AAACCAATTC AACATCCTGC AAGAACTCGC CCTCCAATTA
CCACTCATGT GTTGGATGTG TCGCGGGGCT CTCCGGCCGC CGGTATTGAG GTGCTTCTGG AGCTGTGGAG GGGTGTTCAG
CCTCGGCCGA CATTTGGGGC CACAGGCGGA GGCAATTGGG TGTTTCAGGG GTCATCGACG ACGGATCAAG ACGGCCGAAG
CGGTCAACTG CTGAGCATAG TTGACGATGT GAATCCAGGA ATATACAGGA TAAGTTTCAA CACTGGGAAG TACATCCCAA
ATGGTTTCTT TCCTTATGTG TCTATAGTGT TTGAAATCAA GGATTCACAA AAAAGGGAAC ATTTTCATGT TCCTCTTCTG
CTTGCTCCAT TCTCATTCAG CACTTACCGT GGAAGCTAG

>Vigan.09G029300.01
MEFSFDEKDF VSCCGSTKFA KDMVLASPFS SLQHAVSVAR DVWFNNVDVN GWLQAFSAHP QIGNTHAPSV ASEASAHWSK
GEQSTALSTA TGSSLQELSQ WNARYREKFG FVFLICASGR TTDEILAELK RRYTNRPIVE FEIAAQEQMK ITELRLAKLF
SSTEDISSKI GNYSTAKKAE EDRISIISSH VTAASESSSG KPIQHPARTR PPITTHVLDV SRGSPAAGIE VLLELWRGVQ
PRPTFGATGG GNWVFQGSST TDQDGRSGQL LSIVDDVNPG IYRISFNTGK YIPNGFFPYV SIVFEIKDSQ KREHFHVPLL
LAPFSFSTYR GS*