GBrowse Details

Vigan.08G324900.01

Basic Information:
Name: Vigan.08G324900.01
Multiple alignment
Variant Information
Position: Chr08:41927785..41929408 (+ strand)
Length: 1624
Functional Information:
Description: Similar to Tau class glutathione S-transferase. [K9M8N1, Glycine soja]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.17,3.57,13.18,14.92,10.26,17.80,42 .78,10.51
Automatic updates:
Name: KM818431 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU9) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001248057 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glutathione S-transferase GST 19 (GSTU9), mRNA.
PubMed ID: 11080288 NCBI(pubmed)
Status: Known Variant
Name: NM_001248057 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glutathione S-transferase GST 19 (GSTU9), mRNA.
PubMed ID: 11080288 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr08:41927785..41927900 (+ strand)
Length: 116
Type: five_prime_UTR
Position: Chr08:41927901..41928212 (+ strand)
Length: 312
Type: CDS
Position: Chr08:41928856..41929221 (+ strand)
Length: 366
Type: CDS
Position: Chr08:41929222..41929408 (+ strand)
Length: 187
Type: three_prime_UTR

>Vigan.08G324900.01 class=Sequence position=Chr08:41927785..41929408 (+ strand)
TGAGTGAATG TGAATATTGA ATTTTGGAAG GAAATAAAAT AAAAGAATGG TGATGAGTAT AAAAGGGTGA AAAAGATGAG
ATTTGAAGCG AAGGGTTTTG AAGATTTGGC AAAAGAATGG GAGAAGAAGT GAAGCTGATT GCTACCCATG AAAGCTTCCC
CTGTGCAAGG ATTGAGTGGG CATTAAGGAT AAAGGGTGTG GAATATGAAT ACTTGAAAGA AGATTTGGCA AATAAGAGTC
CTTTGCTTCT TCAATCTAAC CCTGTTCATA AGAAAGTTCC AGTCTTTCTT CACAATGAGA AAACAATTGC CGAATCACTT
GTGATCCTTG AATACATAGA TGAGACCTGG AAGAACAACC CTCTGCTACC TCTTGATCCT TATCAGAGAG CACATGCTCG
CTTCTGGGCC AGGTTTATTG ATGAGAAGGT ACAATATCAT TCAACCTTTT CATTACCCTT TTCCTTATTT CATTTCATTT
CACCATATAA CTTACAACGT ATGAGAGTTG ATTCTGAGAC TGAAGTGAGT TTCAATTTGT TCAAGATCTG GTCTAAATTT
ATAGTTTCAT TTTGGTTATG GTATCTCTGA AACAGGGTGA ATTTGTTCTC TGACTGTTCT TTGTTTTTGA CTTTATTGAA
AACTGAAGTT TTAATTTTAT AAGGTTAAAT GTGATGTGAA AATGTAATTT TTACAATAAA TGAATGAATG AAATGGTGTA
AACTGTTCCA ACTTTAGTCT TGAGTAGAGT ATAACACATC AAAATTATAC TAGTTGGTTT AGAAGAATTA TATTTAATTT
TTAAAAAATT TGAAGATCAA ATGGTATAAA ATTTTGATGA ATGTTTTAAG ACTTTATAAA CTAAAACTAG TTTTAATGAA
GACATCACAT AGTTAAAGAT CTGCTGTGAA AAACACAGTT TCATAGACTT TCTTGCATTT GTTTAGTGCT ATGTATGTGT
AATTTAGAAG TTGGAGAAAA TTTGAGATTA TAAATGATAG GATTTAGATT GATTGTGATG CTGAGAAGAT GATGAAAAAG
TGTGTGATGA AGGTAGTTTT TTTGGAAACA GTGTTTGTAT GGTGTGTGGG GAGCAGCTGT GGCTGAAGGA GAAGAGAAGG
AAAAGGCTGT GGAGGGTGCA TTGGAGTCAC TGAGATTTCT TGAAAAAGAA ATTGAAGGGA AGAAGTATTT TGGAGGAGAG
AAGATTGGTT ATCTTGATAT AGCAGCTGGA TGGTTGTCTC ATTGGCTCAG TGTTCTTGAA GAGCTTGGAG AGATGGAACT
TCTCAATGCA CAGAGATTCC CTTCTCTTCA TCAATGGACT CAAAACTTCA TTCAGACTTC ACCTGTCAAA GATTGCATTC
CATCTAGACA AAGTGTTGTT GAATATTTCA GCTTTGGCAT CAACTATACT CGTTCCTTGG CATCCAATAA ATCTTAGTTT
ATAATTCGTT CATGTTGTTT GTATTGGAAT TCAGTTTTTC TTTATATGGG GTTGCTTCTG TTATCATATG TAATTGTCTG
TCATCAATAC TTAATAAGTT TTATGTGCAG TGAGGTTTCA TGTAATAATG CAATTGTTGG TGATTTACTA CTGATTTCTC
AAGAGAGAAT CTTTGTTTTC TTTA

>Vigan.08G324900.01
TGAGTGAATG TGAATATTGA ATTTTGGAAG GAAATAAAAT AAAAGAATGG TGATGAGTAT AAAAGGGTGA AAAAGATGAG
ATTTGAAGCG AAGGGTTTTG AAGATTTGGC AAAAGAATGG GAGAAGAAGT GAAGCTGATT GCTACCCATG AAAGCTTCCC
CTGTGCAAGG ATTGAGTGGG CATTAAGGAT AAAGGGTGTG GAATATGAAT ACTTGAAAGA AGATTTGGCA AATAAGAGTC
CTTTGCTTCT TCAATCTAAC CCTGTTCATA AGAAAGTTCC AGTCTTTCTT CACAATGAGA AAACAATTGC CGAATCACTT
GTGATCCTTG AATACATAGA TGAGACCTGG AAGAACAACC CTCTGCTACC TCTTGATCCT TATCAGAGAG CACATGCTCG
CTTCTGGGCC AGGTTTATTG ATGAGAAGTG TTTGTATGGT GTGTGGGGAG CAGCTGTGGC TGAAGGAGAA GAGAAGGAAA
AGGCTGTGGA GGGTGCATTG GAGTCACTGA GATTTCTTGA AAAAGAAATT GAAGGGAAGA AGTATTTTGG AGGAGAGAAG
ATTGGTTATC TTGATATAGC AGCTGGATGG TTGTCTCATT GGCTCAGTGT TCTTGAAGAG CTTGGAGAGA TGGAACTTCT
CAATGCACAG AGATTCCCTT CTCTTCATCA ATGGACTCAA AACTTCATTC AGACTTCACC TGTCAAAGAT TGCATTCCAT
CTAGACAAAG TGTTGTTGAA TATTTCAGCT TTGGCATCAA CTATACTCGT TCCTTGGCAT CCAATAAATC TTAGTTTATA
ATTCGTTCAT GTTGTTTGTA TTGGAATTCA GTTTTTCTTT ATATGGGGTT GCTTCTGTTA TCATATGTAA TTGTCTGTCA
TCAATACTTA ATAAGTTTTA TGTGCAGTGA GGTTTCATGT AATAATGCAA TTGTTGGTGA TTTACTACTG ATTTCTCAAG
AGAGAATCTT TGTTTTCTTT A

>Vigan.08G324900.01
ATGGGAGAAG AAGTGAAGCT GATTGCTACC CATGAAAGCT TCCCCTGTGC AAGGATTGAG TGGGCATTAA GGATAAAGGG
TGTGGAATAT GAATACTTGA AAGAAGATTT GGCAAATAAG AGTCCTTTGC TTCTTCAATC TAACCCTGTT CATAAGAAAG
TTCCAGTCTT TCTTCACAAT GAGAAAACAA TTGCCGAATC ACTTGTGATC CTTGAATACA TAGATGAGAC CTGGAAGAAC
AACCCTCTGC TACCTCTTGA TCCTTATCAG AGAGCACATG CTCGCTTCTG GGCCAGGTTT ATTGATGAGA AGTGTTTGTA
TGGTGTGTGG GGAGCAGCTG TGGCTGAAGG AGAAGAGAAG GAAAAGGCTG TGGAGGGTGC ATTGGAGTCA CTGAGATTTC
TTGAAAAAGA AATTGAAGGG AAGAAGTATT TTGGAGGAGA GAAGATTGGT TATCTTGATA TAGCAGCTGG ATGGTTGTCT
CATTGGCTCA GTGTTCTTGA AGAGCTTGGA GAGATGGAAC TTCTCAATGC ACAGAGATTC CCTTCTCTTC ATCAATGGAC
TCAAAACTTC ATTCAGACTT CACCTGTCAA AGATTGCATT CCATCTAGAC AAAGTGTTGT TGAATATTTC AGCTTTGGCA
TCAACTATAC TCGTTCCTTG GCATCCAATA AATCTTAG

>Vigan.08G324900.01
MGEEVKLIAT HESFPCARIE WALRIKGVEY EYLKEDLANK SPLLLQSNPV HKKVPVFLHN EKTIAESLVI LEYIDETWKN
NPLLPLDPYQ RAHARFWARF IDEKCLYGVW GAAVAEGEEK EKAVEGALES LRFLEKEIEG KKYFGGEKIG YLDIAAGWLS
HWLSVLEELG EMELLNAQRF PSLHQWTQNF IQTSPVKDCI PSRQSVVEYF SFGINYTRSL ASNKS*