GBrowse Details

Vigan.08G304900.01

Basic Information:
Name: Vigan.08G304900.01
Multiple alignment
Variant Information
Position: Chr08:38846633..38851623 (+ strand)
Length: 4991
Functional Information:
Description: Similar to Uricase-2. [P53763, Phaseolus vulgaris]
GO: Biological Process: purine nucleobase metabolic process (GO:0006144)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: urate oxidase activity (GO:0004846)
InterPro: Uricase (IPR002042)
Uricase, conserved site (IPR019842)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:65.69,44.70,38.08,21.08,3981.74,161. 85,602.52,33.50
Arabidopsis thaliana homolog: AT2G26230.1
Automatic updates:
Name: NM_001249019 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uricase-2 isozyme 2 (UR2), mRNA.
PubMed ID: 9245835 NCBI(pubmed)
24302157 NCBI(pubmed)
16593585 NCBI(pubmed)
Status: Known Variant
Name: NM_001249762 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uricase-2 isozyme 1 (UR9), mRNA.
PubMed ID: 9245835 NCBI(pubmed)
16667995 NCBI(pubmed)
16593585 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr08:38846633..38846816 (+ strand)
Length: 184
Type: five_prime_UTR
Position: Chr08:38846817..38847161 (+ strand)
Length: 345
Type: CDS
Position: Chr08:38847798..38847890 (+ strand)
Length: 93
Type: CDS
Position: Chr08:38848374..38848449 (+ strand)
Length: 76
Type: CDS
Position: Chr08:38848821..38848930 (+ strand)
Length: 110
Type: CDS
Position: Chr08:38849159..38849250 (+ strand)
Length: 92
Type: CDS
Position: Chr08:38849569..38849742 (+ strand)
Length: 174
Type: CDS
Position: Chr08:38849870..38849960 (+ strand)
Length: 91
Type: CDS
Position: Chr08:38851230..38851313 (+ strand)
Length: 84
Type: CDS
Position: Chr08:38851314..38851623 (+ strand)
Length: 310
Type: three_prime_UTR

>Vigan.08G304900.01 class=Sequence position=Chr08:38846633..38851623 (+ strand)
GAAAATGTTA GTCTCTTCTC TGTCTTAATT TTATAACTTT AACCAATTTT AATTAATCGA AGAAATTAAA TCCTGGTTAA
GTCAAGAGCA ATTTGTTGTC AGAAAATTGA AAATTTTGGA ACTTGTTTGG ACGATGATGT AACGCGCACA CAGAGTTAAT
GGTAAATCTG TGAAACAGGC AAAGATGCCA TTGTCCGCAC TTGAAACACG CGCGGGTATA AATAGAGCGA AACTCGAAAC
CGTAAAATCA CATCTTACTC ACTCTTTCAC TTTACTTAAA AGGGAAAGAA AAGAACTGAA CAACGTAAGA GCGTTCCAAA
ACATGGCGCA GGAAGTTGTG GAGGGGTTCA AGTTCGAGCA GAGGCACGGA AAAGAGCGCG TGAGAGTTGC GCGCGTGTGG
AAGACGCCCC AGGGTCGTCA CTTCGTTGTG GAGTGGCGCG TGGGTATTAG TCTCTTCTCT GATTGCGTCA ATTCCTATCT
CCGCGATGAT AACTCTGACA TAGTTGCCAC TGATACCATG AAAAACACGG TAATAACAAG TACCACCTTG TAAATATCAA
CTCGTATCTC TGATTTCTTC TTCTTCTACT TTTTCTTTTT TTTTACATTT TAACTCTGAA GTTTGTACTT TTTCTGATTG
ATGATTTCTA TTGGAAGGGG TTAGTCCTCA GAACTTGAGG AATCAAAGTT TTGAAATCTC TTTGAAAAAA GCGTTTACAT
TTTCACATAG TTTACGTGGA AAGATTTGCG AGGAAAGTGG AAAACGAAAA ATAGAGAATC TGAATCTGTT TTCAACTTGT
TCTGCAAGTG AGATCAGGTG TTTGGGTGTG TGGAGTTTAA GGTTTTGATT CGTTGAGCTC TTTAATGGGG CTGATATCAT
ACCAGTTAGT TGATATCTGG TTGTGAATTT TTTTAATCCG TCAACCCCTT TGATCTGAAT GCATACTCCT TGCTTAAGAT
CTATTTTCAA TGGTTTACTC ATTTAGTTGA GCTTAAACAT GAATAATAAT TTGAACTTTT CAAGTTTAGA TCGTATACAT
GAATGACAAT CTTATTTTCT TGTTATGGTA CATGTTTCTC GAAAGTTGAA TTTGTATAGA ACATGAATAT GTTTGTCTGA
TCTTCAGTTC ACTAAGTTTT TAGCTTTTAT CTAATGTTGA ATTAGGTGTA TGCGAAAGCA AAGGAATGCT CGGACATACT
TTCTGTCGAG GACTTTGCTA TTCTACTTGC CAAGCACTTT GTATCATTTT ACCAAAAGGT TGGTGACTGA AAATCTTTTA
TCAGTATCTC TACTTCATGC TCTCTGTTTG TTTTTGTCGT TCCTTTATCC TGTTGTAGTT TTTCTAATCT GTTTTGAGCT
GAACATTTTG TTCTGAACCG TCTTATAACG AGTCATCTAC CATATTATTC ACGCACCAAG TGCAATGGTT TTGAGCGTGA
GCAAGTATAT AAGTTCAAAT TTTCTGTCAG ATCTTTGGTG TTGTTCTTCT GCTTTGCCTT CATGAATCTA AATTCGAAGT
ATACTGGGAA AGAACTCAAG TCCCATATTG ACGAGAGATT TGGAAGTACC GTTTACCATT TTATCAGCTA AAATGAGAGA
AATAGTTGTC TATTTTTGCT TGCCTCTGAA ACGAGATTTT AAAAGATTAG GGATCATTTA CCATGAAAAA TCATGGCAGA
AAGAAAATTC TTACATGTTT TTCTTATTAT GCCAAAGAAA TTCTTACTTG CTTTTCTGTA GGTTACTGGT GCTATTGTGA
ATATTGTGGA AAAACCATGG GAGCGTGTCA TTGTGGATGG TCAACCTCAT GAACATGGTT AGTCAAACTA CTATAGATTT
CAAAATTGTC TGTTTTAGAA TGTGCTTGTA TATATCGTAC TATGTTCCAT TCAATTTCTG TTACAGTTGA AGATTCTTTG
TTTGATCTTG GTTATAAAAT CTGAAATATT TAAGGGAGTT TTAGCTACCC TTTCTTTTGT TCAAACTTTT ATTTTTCATC
TTGAACTATG CAGTTTTTAT CATTGGCACT ATTGATATCA CTTAATCATT TTTTTGGTTT CTTCCCTTTT GTTTAAGTAC
TTATTGTTGA AACAGAATAT ACTGAAAAAT TCTTGATTTA GTGAAACAAA TCTGACTTAT AAACTGCAGT TTGTATCTTT
TCTGAATCCT TGGTTTTATT TCTGTAAGGT TTCAAACTTG GATCTGAGAA GCATACAGCA GAGGCAATAG TACAGAAGTC
TGGTTCACTA CAACTGACTT CTGGTATTGA AGGATTGTCG GTGTTGAAAA CAACCCAGGC AAGCTTTCCA CATATAATTT
TCGTGTCGTT TTTCCAATTT CTGTAACTGT AATACACAAG TTCTGGTAAA AAAATAATGT TGTTAGTACA ACTGGAGATA
ACAGTATATA GTAGAGAACT GGTTTTTGGA CTGTGTTGCA TAGTTTTTTG CTACAAAGAT ATATTCTTCT GAAAATAAAT
GTTGATGCTG GTTTCCTTCT CTGTTTTTCT TGCAACTTTT GGGCAGTCTG GTTTTGTGAA TTTCATAAGA GACAAGTACA
CAGCACTTCC TGATACCCGT GATAGGATTT TGGCAACAGA AGTAACTGCT CTGTGGAGGT AAGTTTTGTC CCTATATAAT
TTAAATTGAA CTCCTTAATC CTATATACCA GTTCTGTAGG CACAATATGA ACAATTTCAT TAGTATTTCT TGAAAATTTT
CTTGTCATTG ATTAATTGTA AAATGAAAGA GTTCACACTG CTTCATCCAG GTAAGGATTT TTAGCTTGAG AAGTTTTCTC
ATAGATGTAA CAGGCTTAGG TCCATCTCTT TGTATTTTCT CATTTACAAC TACATAACAT CATGTGTTTC ATACACATTA
AAGATTCATC GTATGTCTCT TTGTCTTTTA TTTCAACAAC TTGTATTTGG TTGTAGGTAT TCATACGATT CGCTATACAC
CCTCCCTCAG AAGCCACTTT ACTTCACAGA CAAGTATCTG GAAGTGAAAA CAGTTCTGGC TGACACATTT TTTGGGCCAC
CAAATAGGGG AGTCTATAGC CCTTCTGTTC AAAACACACT CTACCTGATG GCGAAGGCCA CACTGAACAG GTTATTTGTC
TCTCTATTGT CTCTGCATTT GACAGACATT TTAGGTTGTC CCCTAAATGC CACAAGTTCA ATGCATTTGT TTCAATCATT
GAGGGAATAA CAAGACTTTC ATGCTTTTAT GCTTCAGATT TCCTGACATT GCTTATGTCC ATCTAAAGAT GCCAAATCTT
CATTTCTTAC CAGTCAACAT CTCAAACAAG GATGGTCCAA TTGTGAAGGT ATTGATTCTT TTCCCTAAAA AGCTTGCACA
AGTTAGACAT GTTCACCAAT TGACTATCCT TAGAGCATCC CCAATAATAA ACACAGTTGG AAATTTTAAC TCTTTTTTTA
TTACCCTTAC TTACTATTGG AAGTCTCACA TCCATTAAAG GCCAATTTAT AATATATAAA TGGGTACAAA CCTCACCTTA
TAAGTTGGTT TTGTAGGGTT GAGTTAGTGG GTTTGTTGTT TGTTGGGCAT TCCACCCTCT ATCTTTAAAG TCCATTTCTG
GCATAATGGG TTTTACATTG TTATCTTTTT CCATTGAACT TGCTCTTAAC CTTTGAAAAC CTACTTAGGA TTTGGTTTGG
TATGAAACTG TTTGGTTAAC CATTTTACAC ATATTCATGC ATGAGCATGG ATAGATTTTG CAAAGAATCT GATCGAACCA
CTTTCATATT GTGGTTTGTT TTGAACCAGA AATGTTTTGT GCAAATGATC CTAGTCAGAC TTTCTAAAAT GGTTCCATTT
TTCATTAATT AGAATTTGAA ACGGTTTGGT TCAAAGTTGC TGTTATGCTC TCACGTATTC AATTTGTCTC ATATCCGTAT
ATGATATTTC AAGATATTTT ACTTATATTT ATGAATGAAA TATCCATCTA TGAAACACCA ATATTTTTAT GATAACAATA
ATTTATTACT TTTTATTTTG ATAATTTGCA ATTATATATT TATTATGTTT CAAGAGTTTT TATACATTTT TAAGTACGCA
TTTCACGGGT AGTATCCTAC CATTTTCAAA ATAAGCTTTG AATACACATC AGACCCAATA CATGTAGATG TGCATCATAG
CTATTACGTT GAAAGTATAA GTTATTCAAA TAATTATCTC AAATCAACTA GAGACAGAGC CAAATTATAA TAAAGACGAA
ACCAAATTAT AATATATAAG TGGGATGCAA ACTTCATTTA AAACCCTAAT TTTGAGGGTA TTAGGCATAA ACTCACTTTT
TAAGATAATA TCCGATGTTA TCCAAACTCA TGTCATTATC AAGTTCTCTC CTAGTCTAAT GCTCGAGATG TCTAGTCTTT
TGTTTGAGAG GATGTGATGA GGAGTCTACA TCGACTAGAG ATAAAGTTAA ATTATACTAT ATGAATAGAT GTCAACTCTG
GTTTTACAAA ATTAGTTTTG TAGGGTTGAG TTGGATTTAA AATCATCATG TGTTTTCTAA ATTTTAGGAT CTGTTGTATC
ATTGATGTCT TACCAGTGTT GAATGACACT TATGCAGTTT GAGGATGATG TGTATTTACC AACGGATGAG CCTCATGGCT
CAATTCAAGC AAGCTTGAGC CGTCTTTGGT CGAAGCTGTA GAAACTGCAG AAGCTATTTG TGGTGCTCAT CCCTTCTTGT
GGATTTTCCA GTGCAGCCTA AACAAGCAAA CCTGGCCTCA GTGATACTGC TTTCTTTCCA TATTGATGCG TGTGTCATGT
AGTTCTGGTT TTTGTTATCT TTGTATTTTG TTTAATGGAG AAACTAATAT GCATGAATAA CTTCCACAAG GGATATTCTG
TAGGTTCCAA TAAATTTCCT AGTGACCTTT ATCAATAAAA TGTTCTTATT ATGAGGTTGA TGCAATGCTT CTTTATTCTC
ATGCATGCAT TGTTTATAGT AAAAAAATTT G

>Vigan.08G304900.01
GAAAATGTTA GTCTCTTCTC TGTCTTAATT TTATAACTTT AACCAATTTT AATTAATCGA AGAAATTAAA TCCTGGTTAA
GTCAAGAGCA ATTTGTTGTC AGAAAATTGA AAATTTTGGA ACTTGTTTGG ACGATGATGT AACGCGCACA CAGAGTTAAT
GGTAAATCTG TGAAACAGGC AAAGATGCCA TTGTCCGCAC TTGAAACACG CGCGGGTATA AATAGAGCGA AACTCGAAAC
CGTAAAATCA CATCTTACTC ACTCTTTCAC TTTACTTAAA AGGGAAAGAA AAGAACTGAA CAACGTAAGA GCGTTCCAAA
ACATGGCGCA GGAAGTTGTG GAGGGGTTCA AGTTCGAGCA GAGGCACGGA AAAGAGCGCG TGAGAGTTGC GCGCGTGTGG
AAGACGCCCC AGGGTCGTCA CTTCGTTGTG GAGTGGCGCG TGGGTATTAG TCTCTTCTCT GATTGCGTCA ATTCCTATCT
CCGCGATGAT AACTCTGACA TAGTTGCCAC TGATACCATG AAAAACACGG TGTATGCGAA AGCAAAGGAA TGCTCGGACA
TACTTTCTGT CGAGGACTTT GCTATTCTAC TTGCCAAGCA CTTTGTATCA TTTTACCAAA AGGTTACTGG TGCTATTGTG
AATATTGTGG AAAAACCATG GGAGCGTGTC ATTGTGGATG GTCAACCTCA TGAACATGGT TTCAAACTTG GATCTGAGAA
GCATACAGCA GAGGCAATAG TACAGAAGTC TGGTTCACTA CAACTGACTT CTGGTATTGA AGGATTGTCG GTGTTGAAAA
CAACCCAGTC TGGTTTTGTG AATTTCATAA GAGACAAGTA CACAGCACTT CCTGATACCC GTGATAGGAT TTTGGCAACA
GAAGTAACTG CTCTGTGGAG GTATTCATAC GATTCGCTAT ACACCCTCCC TCAGAAGCCA CTTTACTTCA CAGACAAGTA
TCTGGAAGTG AAAACAGTTC TGGCTGACAC ATTTTTTGGG CCACCAAATA GGGGAGTCTA TAGCCCTTCT GTTCAAAACA
CACTCTACCT GATGGCGAAG GCCACACTGA ACAGATTTCC TGACATTGCT TATGTCCATC TAAAGATGCC AAATCTTCAT
TTCTTACCAG TCAACATCTC AAACAAGGAT GGTCCAATTG TGAAGTTTGA GGATGATGTG TATTTACCAA CGGATGAGCC
TCATGGCTCA ATTCAAGCAA GCTTGAGCCG TCTTTGGTCG AAGCTGTAGA AACTGCAGAA GCTATTTGTG GTGCTCATCC
CTTCTTGTGG ATTTTCCAGT GCAGCCTAAA CAAGCAAACC TGGCCTCAGT GATACTGCTT TCTTTCCATA TTGATGCGTG
TGTCATGTAG TTCTGGTTTT TGTTATCTTT GTATTTTGTT TAATGGAGAA ACTAATATGC ATGAATAACT TCCACAAGGG
ATATTCTGTA GGTTCCAATA AATTTCCTAG TGACCTTTAT CAATAAAATG TTCTTATTAT GAGGTTGATG CAATGCTTCT
TTATTCTCAT GCATGCATTG TTTATAGTAA AAAAATTTG

>Vigan.08G304900.01
ATGCCATTGT CCGCACTTGA AACACGCGCG GGTATAAATA GAGCGAAACT CGAAACCGTA AAATCACATC TTACTCACTC
TTTCACTTTA CTTAAAAGGG AAAGAAAAGA ACTGAACAAC GTAAGAGCGT TCCAAAACAT GGCGCAGGAA GTTGTGGAGG
GGTTCAAGTT CGAGCAGAGG CACGGAAAAG AGCGCGTGAG AGTTGCGCGC GTGTGGAAGA CGCCCCAGGG TCGTCACTTC
GTTGTGGAGT GGCGCGTGGG TATTAGTCTC TTCTCTGATT GCGTCAATTC CTATCTCCGC GATGATAACT CTGACATAGT
TGCCACTGAT ACCATGAAAA ACACGGTGTA TGCGAAAGCA AAGGAATGCT CGGACATACT TTCTGTCGAG GACTTTGCTA
TTCTACTTGC CAAGCACTTT GTATCATTTT ACCAAAAGGT TACTGGTGCT ATTGTGAATA TTGTGGAAAA ACCATGGGAG
CGTGTCATTG TGGATGGTCA ACCTCATGAA CATGGTTTCA AACTTGGATC TGAGAAGCAT ACAGCAGAGG CAATAGTACA
GAAGTCTGGT TCACTACAAC TGACTTCTGG TATTGAAGGA TTGTCGGTGT TGAAAACAAC CCAGTCTGGT TTTGTGAATT
TCATAAGAGA CAAGTACACA GCACTTCCTG ATACCCGTGA TAGGATTTTG GCAACAGAAG TAACTGCTCT GTGGAGGTAT
TCATACGATT CGCTATACAC CCTCCCTCAG AAGCCACTTT ACTTCACAGA CAAGTATCTG GAAGTGAAAA CAGTTCTGGC
TGACACATTT TTTGGGCCAC CAAATAGGGG AGTCTATAGC CCTTCTGTTC AAAACACACT CTACCTGATG GCGAAGGCCA
CACTGAACAG ATTTCCTGAC ATTGCTTATG TCCATCTAAA GATGCCAAAT CTTCATTTCT TACCAGTCAA CATCTCAAAC
AAGGATGGTC CAATTGTGAA GTTTGAGGAT GATGTGTATT TACCAACGGA TGAGCCTCAT GGCTCAATTC AAGCAAGCTT
GAGCCGTCTT TGGTCGAAGC TGTAG

>Vigan.08G304900.01
MPLSALETRA GINRAKLETV KSHLTHSFTL LKRERKELNN VRAFQNMAQE VVEGFKFEQR HGKERVRVAR VWKTPQGRHF
VVEWRVGISL FSDCVNSYLR DDNSDIVATD TMKNTVYAKA KECSDILSVE DFAILLAKHF VSFYQKVTGA IVNIVEKPWE
RVIVDGQPHE HGFKLGSEKH TAEAIVQKSG SLQLTSGIEG LSVLKTTQSG FVNFIRDKYT ALPDTRDRIL ATEVTALWRY
SYDSLYTLPQ KPLYFTDKYL EVKTVLADTF FGPPNRGVYS PSVQNTLYLM AKATLNRFPD IAYVHLKMPN LHFLPVNISN
KDGPIVKFED DVYLPTDEPH GSIQASLSRL WSKL*