GBrowse Details

Vigan.08G296800.01

Basic Information:
Name: Vigan.08G296800.01
Multiple alignment
Variant Information
Position: Chr08:37339383..37345375 (- strand)
Length: 5993
Functional Information:
Description: Similar to Uncharacterized protein. [K7LHW6, Glycine max]
GO: Cellular Component: membrane (GO:0016020)
InterPro: CAAX amino terminal protease (IPR003675)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:12.41,5.38,3.69,3.65,4.91,5.65,4.03,2.65
Arabidopsis thaliana homolog: AT2G36305.1
Structure :
Position: Chr08:37339383..37339581 (- strand)
Length: 199
Type: three_prime_UTR
Position: Chr08:37339582..37339739 (- strand)
Length: 158
Type: CDS
Position: Chr08:37340625..37340702 (- strand)
Length: 78
Type: CDS
Position: Chr08:37341438..37341500 (- strand)
Length: 63
Type: CDS
Position: Chr08:37341665..37341736 (- strand)
Length: 72
Type: CDS
Position: Chr08:37343461..37343572 (- strand)
Length: 112
Type: CDS
Position: Chr08:37343798..37344010 (- strand)
Length: 213
Type: CDS
Position: Chr08:37344172..37344231 (- strand)
Length: 60
Type: CDS
Position: Chr08:37344926..37345132 (- strand)
Length: 207
Type: CDS
Position: Chr08:37345133..37345375 (- strand)
Length: 243
Type: five_prime_UTR

>Vigan.08G296800.01 class=Sequence position=Chr08:37339383..37345375 (- strand)
AAAAAAAGTT AAGAATTGAC AGAAAAAAAG GGGCCAAAAT GTACCCTTTG CTTGAAGTTG ATCCTTGGAC GGCCTTTTGA
GTCCCGGAAC ATACAGTAAC CGTTCTCAGA TAGTCAACCA AGTCCTAAAC AAATTGAAAT TGAATTCAGA CTGAGATTCC
CAATTTCCAG AAACCCTATT TTATGCCCCT TTTTTGCCTC TTCCACTCTA GGGTTTCTGC AACTGCAACA ATTAGCTTCC
GCAATGGCTG AAGAAGGTGT TGTTTTGAAT GCAATGGCGT TATTCGCTTG CATAGCAATG GCCCTCTTCT ACGTCGCCAT
CCTCTACGCT CCCACCTTCC TCCTCCGTCT CCCGCCTCCT TCTTCATTCG AAACCTACAT GATTAGACGC TTCCTCTGCG
CCATCGTTTC GTCTATCCTC TCCCTCTTCC TCTCCGTACT CATCCTCCCC GTATGGATGT CTCTTACCCC CTTATTTTGG
TTATGTTTTC AATTTTTTAC TCGTAGTTTT TCTTCCTGTC ATTAAAATTA TTCTCTTTTA GTTCCTGTTC TCCTTTAGTT
CTTACACGTA TCATTTTTAA TTCCCTTATC GGTAGTCTTT ATGCATACCA TTGTAGTATT TTTAGTCCTT GAGTTTATGA
CTAAAAGAGA TACAAAAGCA TTCTTGAAGT GACTAAAATA TATTTTTAAG CAGAAACTAT TTTTATTTTA TTTTTGTAAC
TACAGAAATA AATGTATTAT TTAAATGCAT AGATGCATTT AGCAACTGGA GAGTTTATCA AGAGTTCTGT CTTATATTAA
AATCATTCTC TTATAAGCGG TGGAAGGGTT GCCGTTGAAT GAAAATAATG GTTGGAACCG AAAAACTTAC ATGCATTTGT
TTAGATACTG TTGGTGTTTT TCAATTATCA TTACAGTTTC ACTTTTATAG TTGGGATATT TTTTTTATGC AAATTTATAT
CATGGGGATT CACTAGGTGA AACTTCAATT TTAGTTAGAA TACCAAAATA CATGTAAGTT TAGTCGTACG CTTTTATGAA
ATTGGTGGGG ATTTTATAGT TATTTTGGGA TATTAGCTTA GATGGTCACA ATGTTTGAGT TTAGTCTTGT AATCATTTAT
GGCTTTATTT TTCTATGTGT TCAGGTGCAA ACTAAGGAGC TGCATCACAT TGTTGGTGTA TTTGGCATCC GGAGGGACCA
TATTGTGAGT AATGTGTATG AGTTTCGCTG GTTCAATTAA GGGATGAACG AGCATTTTAT CTTGTGTGGT GATGTCAAGT
TGTGTTTCTT GCTACCTTAT GCAGATTTGG AAAAAGGGTC ATTGCTGAAT TTTCTTTCTG AAACGTGGTT TTCTGTATGA
AACAGTGGCA AGCAGTGATC CTTCCTCTTT GCTTGACCTC CCTAATGTAT GCTGGGTCTA TCTTTGACAA GTGTCTTCTG
TTAGTGGCTT CTTGGAGGCA GCACGCAAGT TCTGGGGATG CCCTTTCCTT TGATTATTAC AAAATTGCCT TACATCAGTT
TCTTGACTGG TTATCCGAGA TTTCGTCAAA TATTTTGGTG TGGCGAAATT ATGTTGTGGT TAGTACCACT GTCATCATTG
TTCATGTTGA ACCTTATGCT TCCAACAAGC CACTGAGCTT GTAGCTATTT TTCCCCTGTG CTTACAATGA GAAACTGAAA
GCACTGAAGC AAATAGTTTA GTTTGGTAAT TTGTGAATAC AGCTTAGGTG ATGTGCGTTT TATAGGATCA ATTTCGTATC
TTACATGCAT TATGTGAATG ATTTGTTATG GTATACCTAA CAGGCACCCC TTACGGAGGA GTTGGTGTTT AGGGCATGCA
TGATACCTTT ACTTCTGTGT GGAGGATTTA AAACATACAG TGTTACACTT CTTTGCCCTA TTTTCTTCAG CTTGGGTAAG
TACTTATATG CCAATTCTAG GAGATGTTTA AGATTGTTAA GGATATAGAG TAGAATTATC TATTCCACAT CTAAATGAGT
ATCAGTTGTC TTTTAATATT CAAAGATGTT TTAAGAGAAG TCATCAAAAG TCCATAGTAG TGCAACCAAG GTTGTCAAAT
TCTTGAGTTA AGTCTTAAAC TTTAATGAGT TTATGATCTT AAGTAGATGA AACGACTGAA CTCGTTCTTT TCTAAGTAAA
CTCATAAGCT ATTTACATTC ATGTAAATTC AAATAAATTT GAGTCATGAA GCCAGTTAAT AGGTTTGAAA TCAATCTAAT
TTTTACCTAC ATTAACCCCA CAATGACTAT CTTTTTAGGA CACAAACTGA TACCTATCCA CACCCAGAAC AGGCCACAAA
AGGGAATAAA TGACTTAAAT ACAAGACATC TCTAAGTTAT ATTTGCAAAA GAGGAAAATA CAGCAATATA ACCGATCATA
CTGCCCAAAG CTAGACTCCT CTAGAGCAAT CAACAAGGTT CTCTATTCAA CCAGACAACA AAGACCCCCC TTCCCTTCTC
GCCACACCTG ATACTAATAA CAGAAAAACA TTCCTCTTCT CTCTCTCCTC TAACTTACCA CTATTCTAAT TAGAGCACGT
TATTACCCCT GCCCTTCTTT CTCACATATA CCCTTTCCCA TCTTGAACTG TGCTTCACTT CTTGGGCTAG ACACTCGCTG
GCCCATTTAC TCATTGGGCC CCCTATCACA AACCATGTGA GGAAATTAGC TCTTTTTTTT AAATGTTTTC ACTTTAAGAA
CTTGTGCTTT TATCAATTTA TACATGATTA GGTTATTTAT ATAAATATGA TCTTATTTAG CACCAATGTA TAGTTCGCCA
CTTTTCTTTG CTATGAAGTT GAAATGTTGA ATTATTGTTA TGTCAAAAGT ATTGTGTTAT GCAAGTCTAC ACAAGTTTCA
CAAGTTTATG TTGACTTTTT GAGTTTGACA ACTGAGTACA ACAATGGCAT TCTGCCAAGT TTTGTTAAGC TGAAGTTCAT
CATGCCTTCA AACTGCTTAT ACCTGAGAAT TTGTCCTTTA ACTGAGTCCA ATGGTGTCTT TTGATTTGTG TAATTGATCT
GCCTAATGGG ATAAGGCTAT TGTTACTGTT GTTTGGGAAG GGACACAATA AAATAAATTC ATTTTATGGT TGTAAGCTGA
AGAAACATTT GCATGTGTTT GCCTGAATGG GGATGCATGT TTATGTAAGA GATTTCTTTG TATCTTTTTT AGCAGGATAT
AATTTCTCTA ATGAATTAGG CAGCCAAGGT TTTAACCGTC TCATTTAATT ATAATATATG TGAAAAATAA CTTGTTGCCT
TTATATTTTA CACATAGTAC GTGAATAATT ATTAACTACT AATCGGTAAA GATTACATGT ACCCTAAGAA AAATGAAATG
CAATGGATAA AATTTTGTCC ATGATTCCTA CTATGTCTCA TGCACAAACC TTTTCACCAG TTACCCACAA AAACAGTTTT
GGTATACACT TGAGTGAAAC TAATGCATGT TTCACACAGC ATAGAGGTCA GATAAATGTT TTAACAGTGA GATAAATTTC
CTTACAATTT TTAGCAAATT TTCATTTGGC TGTAGATTGA AGAAAATAAT AAGCCGATAT TATTGTCCTT TTTAAATGCA
AGGCTTATTG AGATGTTTTG CTGCATTATT GGTTTGCAGC ACATTTAAAT CATTTTGTGG AGATTTACGC CAAGCAAAAT
TACAGAATAA TGAAGGCTGT TATGGTTATA GGTATGGATG TTTATGTTGT TCATCAGCTC CTGCATTTGT TATATCAAAG
TCACACTGGC TAAGTCGCTG TATCTTTTAT AGAGCATTTA AATTTTTGAG GCATTTCAAA GAATCTCAAC TTAGTATTTT
TGGATGATAG TCTCACTGCA AAATATTTCT TACAGGTCTC CAGCTTGGCT ACACTGTTGT CTTTGGGTCA TATGCATCTT
TTCTTTTCAT TCGAACTGGT ATGTGGCTTT AATATATTTG GTCTGACTGC TATTGTTGAT GATAAATTGC ACTTCTGAAA
CAGAAATTTA GATACATTCA ACATTGCTAA AGAATTGAAT GGATAATGAC TGAGGGAAAT GACTCAAATT TATCCTTTAT
ACCGGACAGT GAATTTACTT CGAGTTTAAA ATACATTGAA CCCTTTTATA AGGTTTAAAT ACCTTTTTGA TCCCTGTATT
AGCATTGGTC CCTATAATAG TTTGATTTTT AGTTCCTATA ATAGTTTGAT TTTAGTCCCT GTAGTTTGAT TTATTTGGGT
TTTGTCCCTG CCACTAACAA CATAACACCA TACATTCTTC GAGAGACAAG TCATACAAAA ATTAAGACTA ATGTTTGGTG
GTCAAAATCT AAAAAATAAA GCTATAGTAA CTGAACCAAA TATTTGTTGG ACAAATGTAA CGTAATGGCA CTTGCCTTAA
TGTACAGAAA GTTTCTCTGT TGTGGGTTGA GGTTGACATG ATAGGAAAGA CATCATGAAA TTATATTACT ATGACTTGGT
ATCATTATAT TCATGCTGTT CATTTAGCCT TAGACGTAAA AGATATAGTT ATTTTTTTAA ATTGGATACA TTCTAGTAAC
CTATTTTTGG GGATTAGTTC TTTTCTAATG AGGAGCCAAC GTATACGGTT TTAGGATGGC CTATCCTTCT TTTTTCCTGT
CTCTTATATT TGTTTCTGGC TGATGTTTTT CAGGACACCT TGTAGCTCCT TTAGTGGCGC ACATATTTTG TAATTTCATG
GGACTGCCTG TATTGTATTC GCAGAGAAGT AGTAAGTTGC TTATTAAAGT AAATTGCAAA TGTGACTTCT ATGGTTGTGA
TAGTAAATTG CAAACTACTA TAAGCCTCTT TGCTTTCAAT TTTTTCTTTC CTTCATTTCG TTGAATTATT CTGAGCTTAG
CATAATGTAG AGCTCAAAAA AGTGCTGCAA GTTATAATAG TTTTAGAAAT TTAGTTTCAG TTGGATTTCT GACTGTAGGT
ATAATTATTA TAAATTTTAA ATTATTAGTA ATGACTTACG TTTTACTATT AATTAATATT CTTTTATAAC TCTTCTGATC
ATGAATTATT TACTAAAATG TGAAACAAAG AATGGAAAAC TATGAAAAGT ACTTTCATAT GTTACCATTT TTTTAGCTTT
CTAAAATTGA TGTACTTGTT AGTTACTGAA TTTTGTGTGA GATCAATATT GGGGCATCTA AGAAATTGTA CTTGCTACAT
ACAGAATTTT AAATTTTAAA GTTTGGTACA TACATGACAA AACATTACAT GGTTGGGTTA AAAGTATGTT TATTTTAACC
AAAAGCCTGT TCTGTGATTG AAAGTATGTT TATTTTAAGT AAGGTTTCGC GAGCATGAAA GTTGAGATAT GGTTCTGATA
TTATTGAAGT TTTAGATCTA ATATCTATGT TGACACAAGA AGAAATCGCA CTCTTTGTAA GACCTATATT GTGCATGTAT
AGGAAGATTT ATTTTATTTT TTAAAAGAAA AGAGGGGGGC CAGGGAAAAT AACAGTGTTA GTTAGTACGA TAAACTGTAC
TCATGGTCTG CTCATCTTTT GTCATGGAAC TCTGGATAAG TTGATCTGTG GCTTACTATT CATTTCCATT TAAATGTGGT
TTTGGACTTA TTCATTTGTT TCTGTTTCTT TTTCAGGGAT TGTAAGTGTA ACATTCATAA TAGGATTCCT GGGCTTCTTG
TGGCTTCTTT TCCCAATGAC GGGCCCAGAT TTGTATAATG ATAGAATAGA TAACTGCAGT TGTTGGCAAG GGTACTGCAC
ATGGAGAGAA AGGATAAGAA TGCCCCAGAT GTAAATGTTA GTGTTTTTTT TAGGATGGGG TTGGTGGCCA AGGAAGAAAG
AGTTCTATTT GTGCAGAGTT TTCCTTAAAA TTGCTTCAAA GTTAGAATTT TCCAAGGGCT TAAAAAAGAC TCCACATCAT
TACATGATTA TAGTTTTGAA GAATTTTGCT CCTCTAAAGT GCCAGAGTAA TAATCAAGAT GTAGAAATCA TCA

>Vigan.08G296800.01
AAAAAAAGTT AAGAATTGAC AGAAAAAAAG GGGCCAAAAT GTACCCTTTG CTTGAAGTTG ATCCTTGGAC GGCCTTTTGA
GTCCCGGAAC ATACAGTAAC CGTTCTCAGA TAGTCAACCA AGTCCTAAAC AAATTGAAAT TGAATTCAGA CTGAGATTCC
CAATTTCCAG AAACCCTATT TTATGCCCCT TTTTTGCCTC TTCCACTCTA GGGTTTCTGC AACTGCAACA ATTAGCTTCC
GCAATGGCTG AAGAAGGTGT TGTTTTGAAT GCAATGGCGT TATTCGCTTG CATAGCAATG GCCCTCTTCT ACGTCGCCAT
CCTCTACGCT CCCACCTTCC TCCTCCGTCT CCCGCCTCCT TCTTCATTCG AAACCTACAT GATTAGACGC TTCCTCTGCG
CCATCGTTTC GTCTATCCTC TCCCTCTTCC TCTCCGTACT CATCCTCCCC GTGCAAACTA AGGAGCTGCA TCACATTGTT
GGTGTATTTG GCATCCGGAG GGACCATATT TGGCAAGCAG TGATCCTTCC TCTTTGCTTG ACCTCCCTAA TGTATGCTGG
GTCTATCTTT GACAAGTGTC TTCTGTTAGT GGCTTCTTGG AGGCAGCACG CAAGTTCTGG GGATGCCCTT TCCTTTGATT
ATTACAAAAT TGCCTTACAT CAGTTTCTTG ACTGGTTATC CGAGATTTCG TCAAATATTT TGGTGTGGCG AAATTATGTT
GTGGCACCCC TTACGGAGGA GTTGGTGTTT AGGGCATGCA TGATACCTTT ACTTCTGTGT GGAGGATTTA AAACATACAG
TGTTACACTT CTTTGCCCTA TTTTCTTCAG CTTGGCACAT TTAAATCATT TTGTGGAGAT TTACGCCAAG CAAAATTACA
GAATAATGAA GGCTGTTATG GTTATAGGTC TCCAGCTTGG CTACACTGTT GTCTTTGGGT CATATGCATC TTTTCTTTTC
ATTCGAACTG GACACCTTGT AGCTCCTTTA GTGGCGCACA TATTTTGTAA TTTCATGGGA CTGCCTGTAT TGTATTCGCA
GAGAAGTAGG ATTGTAAGTG TAACATTCAT AATAGGATTC CTGGGCTTCT TGTGGCTTCT TTTCCCAATG ACGGGCCCAG
ATTTGTATAA TGATAGAATA GATAACTGCA GTTGTTGGCA AGGGTACTGC ACATGGAGAG AAAGGATAAG AATGCCCCAG
ATGTAAATGT TAGTGTTTTT TTTAGGATGG GGTTGGTGGC CAAGGAAGAA AGAGTTCTAT TTGTGCAGAG TTTTCCTTAA
AATTGCTTCA AAGTTAGAAT TTTCCAAGGG CTTAAAAAAG ACTCCACATC ATTACATGAT TATAGTTTTG AAGAATTTTG
CTCCTCTAAA GTGCCAGAGT AATAATCAAG ATGTAGAAAT CATCA

>Vigan.08G296800.01
ATGGCTGAAG AAGGTGTTGT TTTGAATGCA ATGGCGTTAT TCGCTTGCAT AGCAATGGCC CTCTTCTACG TCGCCATCCT
CTACGCTCCC ACCTTCCTCC TCCGTCTCCC GCCTCCTTCT TCATTCGAAA CCTACATGAT TAGACGCTTC CTCTGCGCCA
TCGTTTCGTC TATCCTCTCC CTCTTCCTCT CCGTACTCAT CCTCCCCGTG CAAACTAAGG AGCTGCATCA CATTGTTGGT
GTATTTGGCA TCCGGAGGGA CCATATTTGG CAAGCAGTGA TCCTTCCTCT TTGCTTGACC TCCCTAATGT ATGCTGGGTC
TATCTTTGAC AAGTGTCTTC TGTTAGTGGC TTCTTGGAGG CAGCACGCAA GTTCTGGGGA TGCCCTTTCC TTTGATTATT
ACAAAATTGC CTTACATCAG TTTCTTGACT GGTTATCCGA GATTTCGTCA AATATTTTGG TGTGGCGAAA TTATGTTGTG
GCACCCCTTA CGGAGGAGTT GGTGTTTAGG GCATGCATGA TACCTTTACT TCTGTGTGGA GGATTTAAAA CATACAGTGT
TACACTTCTT TGCCCTATTT TCTTCAGCTT GGCACATTTA AATCATTTTG TGGAGATTTA CGCCAAGCAA AATTACAGAA
TAATGAAGGC TGTTATGGTT ATAGGTCTCC AGCTTGGCTA CACTGTTGTC TTTGGGTCAT ATGCATCTTT TCTTTTCATT
CGAACTGGAC ACCTTGTAGC TCCTTTAGTG GCGCACATAT TTTGTAATTT CATGGGACTG CCTGTATTGT ATTCGCAGAG
AAGTAGGATT GTAAGTGTAA CATTCATAAT AGGATTCCTG GGCTTCTTGT GGCTTCTTTT CCCAATGACG GGCCCAGATT
TGTATAATGA TAGAATAGAT AACTGCAGTT GTTGGCAAGG GTACTGCACA TGGAGAGAAA GGATAAGAAT GCCCCAGATG
TAA

>Vigan.08G296800.01
MAEEGVVLNA MALFACIAMA LFYVAILYAP TFLLRLPPPS SFETYMIRRF LCAIVSSILS LFLSVLILPV QTKELHHIVG
VFGIRRDHIW QAVILPLCLT SLMYAGSIFD KCLLLVASWR QHASSGDALS FDYYKIALHQ FLDWLSEISS NILVWRNYVV
APLTEELVFR ACMIPLLLCG GFKTYSVTLL CPIFFSLAHL NHFVEIYAKQ NYRIMKAVMV IGLQLGYTVV FGSYASFLFI
RTGHLVAPLV AHIFCNFMGL PVLYSQRSRI VSVTFIIGFL GFLWLLFPMT GPDLYNDRID NCSCWQGYCT WRERIRMPQM
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