GBrowse Details

Vigan.08G256900.01

Basic Information:
Name: Vigan.08G256900.01
Multiple alignment
Variant Information
Position: Chr08:25978813..25982626 (+ strand)
Length: 3814
Functional Information:
Description: Similar to Expressed protein. [Q52ZI4, Pisum sativum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.75,3.59,3.86,10.11,2.20,5.88,1.97, 5.44
Arabidopsis thaliana homolog: AT2G25920.1
Automatic updates:
Name: NM_001255896 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100775405 (LOC100775405), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001255896 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100775405 (LOC100775405), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:25978813..25979028 (+ strand)
Length: 216
Type: five_prime_UTR
Position: Chr08:25979029..25979154 (+ strand)
Length: 126
Type: CDS
Position: Chr08:25979597..25979694 (+ strand)
Length: 98
Type: CDS
Position: Chr08:25981460..25981922 (+ strand)
Length: 463
Type: CDS
Position: Chr08:25981923..25982626 (+ strand)
Length: 704
Type: three_prime_UTR

>Vigan.08G256900.01 class=Sequence position=Chr08:25978813..25982626 (+ strand)
GAAATAGAGC AAAGAGAACA TAGTAGGTTT CCCTCCAATC GTTTTTCTGA GGCCTCAAAA CCGAACCAAC TCTGATACTG
CTATGTTTCA CTGTGAAGGA AGACCGAACG CGAAGCGTAA GCCTTCTCTG CACAATAAAT TAGGGTTTCA GCATTGAACA
GACTCTTCTT CCCACCCCAA AGAGAAAGTC TTGGTTTAGA TGAGTTGGTC TGAACAATGG GTTCTGATTC CAATTTGGGA
GGGACACCCT CAACATCCTC GCCCAGTGCC AAGCGCACCA GAGATCCTGA AGAGGAAGTT TACCTCGACA ATCTTCGCTC
CCACAAACGT TACCTAAGCG AGGTTACACA AATTTCCCCC TTTTGTCGTT TTATTATTAC TTCCTTTATT TTAATGTTTT
TACACTAACC TACTTTCTTA ATTGTTTTTC TTTTGTCTTT TTGTTTTTCG CTAAGTTAGA CTTTTTAATC ATTCTGCAGT
TATCTTTGTG AAATGCCCTG CCATGGCCTT TCAGCTTAAC TGTGTTTTTC TAATATATGT TTCTCAATCT CGATTTAATT
TATCAATAAT TGTCTTGGTT TAAGTATTGT TTGGATTTGA GAGACTTGTC TTGAGCGTGT TTTTTTTTTG TTGGAACATG
TGTTTGTTTT CGTCACATAG ATCTTTGTTT GAGTTGATAC CTTGTGGTTT TAATATTTTA TTTTCGTGCT TGTTTTTGTT
GAAGTCAAAT GAAATTAACC ATCATTAATT TAGAGTAACT TACATTTATT GTTTCTGTGC CCAGATAATG GCATCCAGTC
TCAATGGATT GACAGTTGGG GACTCGCTTC CTGATAATCT CATGGAATCT CCGGCAAGGT CTGAAAGCGT GTTCTCTTTC
AGGTAAAATC ATAACTACTT TTCCGTGTAA GATTTGTTCA CTCTTTGGGG TTTTATGAAT AACTATTTCT ATGATTGAGG
TTTATTTTGA TGCATTTCAG TTGTAACAGT TGGATATTAG TGGAACTTGA GTAAGCTGCT AATTGCTCAG GACATTAGTT
ATCGTCACTT GCATTATTAC ATTTAATATA CATGTTTTGG TTTGGCAGTG TAGGCTGGCT TTTGAAATCT TGTGTAAATT
ATACTATTTT CATCTTCCTT GTTACTTTTG TGATTATTCT TCTCTCCGTT ATATGCCAGA GTTCAGTTAG TTTTCATAAA
ATCATCATTT GGCCATTGAT AGATACAGAA GATAGTTCTG TCGGTATCTC TATTGCAGAT CTTGAGTCTG AATTAATGTT
CACCTGTAGT GGTGCATGTT ATTATGCTCT ATATTTTTTT CGGTGGGGTG GTGCAGGAAT ACTAAAACTT TCCTTACTTT
GGTTTTCTTT GCAAAGAAAC CCCAAACCTG AAAAGGGTAG AAGGCCCTTG TTTGTGTCTA GTCAAATGGT CATTTGGACG
CTGAGACATC CATTTATCAT TTTGCTGTCA TGCAAACATA TATATAATTG GTAATATTAG TCTCTTCACT TGGTTATCTT
TAAACAGAAC CTTGTTAGCC ATGAAATTTG TCATTTTCAT GGTCGAAAGC TCCTCCTTAC TACTGTGCCT CTTATGTGGG
CTATTTGATG TGTACTTTTG GAGTAATAAT GGGTAGGTGT AGGGACTAGA AATCACAACC AGATACTTTC TAGTCATTAG
ACAAAAGTTG ATGCACCCTA GATTCAGATG TGTATGTGAA CCCCATATCC CTTCTTCCTG ATAAATAGGC AACTCACCCG
ACTCAAGTAT GCGGATTTTT GGTTCAAAAA AGTAAAATAC TACAAACAAA TCATGGAATC ATGCGTTGTA ATTTTTATTT
TGTGGAGGGG GAGACAAAGA TTGAACTAGC AAGTAGCCAT AGCTTGCAGA GGATTGACTA GAGTTCTTTG GTAGATTTCC
AACTGGGTCA AATATGAAGT GACTCTAGTC CTTAGACATG TTGCTTGATT TCTCTTGCAG TATATATACC TTTAAAACTT
TCCCATCTTT AAATGACCCA AAATCTATTA AAATTATTTT CCAATGTATA CATACACACC CGTAAAAATG ATCATGCATG
ATAAAAATTG TTGCTAACTC TACTTCATTT GTTTCATATC CTATATGCTT GAATAATTGG TACATATTCA TATTTATATT
TCCATATGGT GTGTGTCTTA GTTTATGGTT ACATTCAAAT CTCATAATCA ACATGACTGT AGACGGCTTT ATTCATAGTC
AATTTAGTCA TATATGGTTT GGTATCATAA ATGCATAATT AACATATTTA ATATGTCCCG CACGCATAAA ATTCCATATT
ATCATGTTAT CAAATGTTGA AAATACTAGC AGATTAAGCA AATAACTAAA ATACTCGAAA TTTATATGGG TGTATAACTA
GAAAAGCGAT AAAGTATATT AATAGTGTAG TTCAGAGATT AACAATAAGG ACCGAAAACA AGATTGTTTT GGTTTTTATA
TGACTGTTAG ATTAGTTTCA TGTTCTGAAA ATTGAAAGAG TATATAATTT GGGACATCTT TTACATAAGA ATTGAACTGC
AGGCAATCTG TTGTTAAAAT TAATTAGTTT TATTACCCAA TGATTAGCAA CGTTTACAAT AATTAATTGT GTTGAATTTA
TTTTCAGAGA TGATATATCT TTACAATATT CACCTATGTC AGAAGATTCA GATGACTTGA GGTTTTGTGA GACTCCTGTG
CACAGTTGTT CGTCCCAGCC CGACAGTCTT CCCAGTAGTC CAGTTTCTTC TCCACATAGG TACCATAAGT CGCAGAATGT
ATTATCTTCG GCACCTTCCT CAAGTTCAAA TGCTTCTCAT GGCTCAACCG TTTCCACTGC AACTTGCCCC CAGCCTCGTC
AGCGAGGGTC AGATTCTGAA GGTCGCTTCC CATCATCTCC AAGTGATATA TGCCACTCAG CTGACTTGAG AAGAGCTGCA
CTTCTAAGAT CTGTGCAGAT GAGAACACAA CCATCCTCTG CATCTTTGGA CCTGCCTTTT GGTTCTAACC AAGACCCTGC
TCCTAACATA GATCCTGAGG AAAGATCATG CTCATATATA AAATCTCTAG TTGATGAGAG AGAGTACTGA AAGGAATGGT
GTTAAGTAGC ATTGTATTGT GTCAATCCAG TGTCTCCAAT GCGGGATGGT TGCTTGTGTT AGCTATGGCC AAAATGTGTT
CGTCTTTTAT CTTATGGCCC AGCTCTATGT AGTAAATAGT TGTATGGCTT CGGAATTTTA CCTTACTAAT TTTTTATTTC
GTTAGTTTAT TTTAATATAA TTGAGGATTT TAAATGAAAA AGTTGACCAC AAGAATCGAA TAGATAATTG ACATGCTATA
AGCGTGATAA ATTTACGGCC ACAATCAAAT AGCTAAAGGC CGAAGTAAAA GTCAGTAGTC CTCAAAATTT TAAATCGCTC
AGGTATAATT CGATGGGGGT AGAAGAATGG TAATCTTTCA TCCCCAAATA AAAGATAGGA TCATTAATAC AGACTCAAAT
TAAGCACTAC AAGTCTCCAT GTCAAATATC TCCCAGCAAT GTTGATATCA AAGTCGTGGT GGATATCCCA TGTTTCCAAG
CAGGATGGTT AATTGCACCA TTGAATCAAG CATAAGCAGA CAGGATATTT TTCTTTAGAG TAAACTCGTC GGCCTTAGCA
GGACTAACAG ACTGCATCAA TCAATAAAAT AAAAGCGAGT TACACTTTCA ATTTTCATCT CAACTACGAC CAAATTTAAT
TATTGCAAAA CAATTATTTC GAGATTACAA GTTTTTTCTC AAGGAAGTCT TTAA

>Vigan.08G256900.01
GAAATAGAGC AAAGAGAACA TAGTAGGTTT CCCTCCAATC GTTTTTCTGA GGCCTCAAAA CCGAACCAAC TCTGATACTG
CTATGTTTCA CTGTGAAGGA AGACCGAACG CGAAGCGTAA GCCTTCTCTG CACAATAAAT TAGGGTTTCA GCATTGAACA
GACTCTTCTT CCCACCCCAA AGAGAAAGTC TTGGTTTAGA TGAGTTGGTC TGAACAATGG GTTCTGATTC CAATTTGGGA
GGGACACCCT CAACATCCTC GCCCAGTGCC AAGCGCACCA GAGATCCTGA AGAGGAAGTT TACCTCGACA ATCTTCGCTC
CCACAAACGT TACCTAAGCG AGATAATGGC ATCCAGTCTC AATGGATTGA CAGTTGGGGA CTCGCTTCCT GATAATCTCA
TGGAATCTCC GGCAAGGTCT GAAAGCGTGT TCTCTTTCAG AGATGATATA TCTTTACAAT ATTCACCTAT GTCAGAAGAT
TCAGATGACT TGAGGTTTTG TGAGACTCCT GTGCACAGTT GTTCGTCCCA GCCCGACAGT CTTCCCAGTA GTCCAGTTTC
TTCTCCACAT AGGTACCATA AGTCGCAGAA TGTATTATCT TCGGCACCTT CCTCAAGTTC AAATGCTTCT CATGGCTCAA
CCGTTTCCAC TGCAACTTGC CCCCAGCCTC GTCAGCGAGG GTCAGATTCT GAAGGTCGCT TCCCATCATC TCCAAGTGAT
ATATGCCACT CAGCTGACTT GAGAAGAGCT GCACTTCTAA GATCTGTGCA GATGAGAACA CAACCATCCT CTGCATCTTT
GGACCTGCCT TTTGGTTCTA ACCAAGACCC TGCTCCTAAC ATAGATCCTG AGGAAAGATC ATGCTCATAT ATAAAATCTC
TAGTTGATGA GAGAGAGTAC TGAAAGGAAT GGTGTTAAGT AGCATTGTAT TGTGTCAATC CAGTGTCTCC AATGCGGGAT
GGTTGCTTGT GTTAGCTATG GCCAAAATGT GTTCGTCTTT TATCTTATGG CCCAGCTCTA TGTAGTAAAT AGTTGTATGG
CTTCGGAATT TTACCTTACT AATTTTTTAT TTCGTTAGTT TATTTTAATA TAATTGAGGA TTTTAAATGA AAAAGTTGAC
CACAAGAATC GAATAGATAA TTGACATGCT ATAAGCGTGA TAAATTTACG GCCACAATCA AATAGCTAAA GGCCGAAGTA
AAAGTCAGTA GTCCTCAAAA TTTTAAATCG CTCAGGTATA ATTCGATGGG GGTAGAAGAA TGGTAATCTT TCATCCCCAA
ATAAAAGATA GGATCATTAA TACAGACTCA AATTAAGCAC TACAAGTCTC CATGTCAAAT ATCTCCCAGC AATGTTGATA
TCAAAGTCGT GGTGGATATC CCATGTTTCC AAGCAGGATG GTTAATTGCA CCATTGAATC AAGCATAAGC AGACAGGATA
TTTTTCTTTA GAGTAAACTC GTCGGCCTTA GCAGGACTAA CAGACTGCAT CAATCAATAA AATAAAAGCG AGTTACACTT
TCAATTTTCA TCTCAACTAC GACCAAATTT AATTATTGCA AAACAATTAT TTCGAGATTA CAAGTTTTTT CTCAAGGAAG
TCTTTAA

>Vigan.08G256900.01
ATGGGTTCTG ATTCCAATTT GGGAGGGACA CCCTCAACAT CCTCGCCCAG TGCCAAGCGC ACCAGAGATC CTGAAGAGGA
AGTTTACCTC GACAATCTTC GCTCCCACAA ACGTTACCTA AGCGAGATAA TGGCATCCAG TCTCAATGGA TTGACAGTTG
GGGACTCGCT TCCTGATAAT CTCATGGAAT CTCCGGCAAG GTCTGAAAGC GTGTTCTCTT TCAGAGATGA TATATCTTTA
CAATATTCAC CTATGTCAGA AGATTCAGAT GACTTGAGGT TTTGTGAGAC TCCTGTGCAC AGTTGTTCGT CCCAGCCCGA
CAGTCTTCCC AGTAGTCCAG TTTCTTCTCC ACATAGGTAC CATAAGTCGC AGAATGTATT ATCTTCGGCA CCTTCCTCAA
GTTCAAATGC TTCTCATGGC TCAACCGTTT CCACTGCAAC TTGCCCCCAG CCTCGTCAGC GAGGGTCAGA TTCTGAAGGT
CGCTTCCCAT CATCTCCAAG TGATATATGC CACTCAGCTG ACTTGAGAAG AGCTGCACTT CTAAGATCTG TGCAGATGAG
AACACAACCA TCCTCTGCAT CTTTGGACCT GCCTTTTGGT TCTAACCAAG ACCCTGCTCC TAACATAGAT CCTGAGGAAA
GATCATGCTC ATATATAAAA TCTCTAGTTG ATGAGAGAGA GTACTGA

>Vigan.08G256900.01
MGSDSNLGGT PSTSSPSAKR TRDPEEEVYL DNLRSHKRYL SEIMASSLNG LTVGDSLPDN LMESPARSES VFSFRDDISL
QYSPMSEDSD DLRFCETPVH SCSSQPDSLP SSPVSSPHRY HKSQNVLSSA PSSSSNASHG STVSTATCPQ PRQRGSDSEG
RFPSSPSDIC HSADLRRAAL LRSVQMRTQP SSASLDLPFG SNQDPAPNID PEERSCSYIK SLVDEREY*